RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
LINC01398-201ENST00000416581 A0A1W2PNM2 257 aa7.07□□□□□ -1.28
LINC01398-201ENST00000416581 ATP11AUNQ6ZP68 121 aa7.07□□□□□ -1.28
LINC01398-201ENST00000416581 OBSCN-AS1Q96MR7 158 aa7.07□□□□□ -1.28
LINC01398-201ENST00000416581 PRO0461Q9UI25 63 aa7.06□□□□□ -1.28
LINC01398-201ENST00000416581 A0A1B0GV90 55 aa7.05□□□□□ -1.28
LINC01398-201ENST00000416581 CCKP06307 115 aa7.05□□□□□ -1.28
LINC01398-201ENST00000416581 Q75L30 129 aa7.05□□□□□ -1.28
LINC01398-201ENST00000416581 LOC110117498A0A087WWA1 95 aa7.04□□□□□ -1.28
LINC01398-201ENST00000416581 PDE6GP18545 87 aa7.04□□□□□ -1.28
LINC01398-201ENST00000416581 SS18L2Q9UHA2 77 aa7.03□□□□□ -1.28
LINC01398-201ENST00000416581 A0A087WSZ3 146 aa7.02□□□□□ -1.29
LINC01398-201ENST00000416581 F8W1H4 67 aa7.02□□□□□ -1.29
LINC01398-201ENST00000416581 C21orf62-AS1Q17RA5 79 aa7.02□□□□□ -1.29
LINC01398-201ENST00000416581 Q6ZQT0 140 aa7.02□□□□□ -1.29
LINC01398-201ENST00000416581 C14orf132Q9NPU4 83 aa7.02□□□□□ -1.29
LINC01398-201ENST00000416581 VPS25Q9BRG1 176 aa7.01□□□□□ -1.29
LINC01398-201ENST00000416581 A0A1B0GW54 56 aa6.99□□□□□ -1.29
LINC01398-201ENST00000416581 ETDBQ3ZM63 59 aa6.93□□□□□ -1.3
LINC01398-201ENST00000416581 Q96NJ1 140 aa6.93□□□□□ -1.3
LINC01398-201ENST00000416581 C20orf166-AS1Q96NR2 134 aa6.92□□□□□ -1.3
LINC01398-201ENST00000416581 LINC00472Q9H8W2 130 aa6.91□□□□□ -1.3
LINC01398-201ENST00000416581 FLGP20930 4061 aaPredicted RBP6.91□□□□□ -1.3
LINC01398-201ENST00000416581 A8MUU9 505 aa6.88□□□□□ -1.31
LINC01398-201ENST00000416581 IGKV4-1P06312 121 aa6.87□□□□□ -1.31
LINC01398-201ENST00000416581 J3KT08 172 aa6.86□□□□□ -1.31
LINC01398-201ENST00000416581 NREPQ16612 68 aa6.86□□□□□ -1.31
LINC01398-201ENST00000416581 SIGMAR1Q99720 223 aa6.86□□□□□ -1.31
LINC01398-201ENST00000416581 DEFB116Q30KQ4 102 aa6.85□□□□□ -1.31
LINC01398-201ENST00000416581 FAM236DA0A1B0GTK5 79 aa6.8□□□□□ -1.32
LINC01398-201ENST00000416581 FAM236CP0DP71 79 aa6.8□□□□□ -1.32
LINC01398-201ENST00000416581 Q6ZVQ6 151 aa6.8□□□□□ -1.32
LINC01398-201ENST00000416581 LINC00846Q9NV44 126 aa6.8□□□□□ -1.32
LINC01398-201ENST00000416581 NDUFB1O75438 58 aa6.79□□□□□ -1.32
LINC01398-201ENST00000416581 UBL5Q9BZL1 73 aa6.79□□□□□ -1.32
LINC01398-201ENST00000416581 RBM12B-AS1Q9P1G2 102 aa6.79□□□□□ -1.32
LINC01398-201ENST00000416581 A0A1B0GVX0 72 aa6.78□□□□□ -1.32
LINC01398-201ENST00000416581 A8MWP4 228 aa6.78□□□□□ -1.32
LINC01398-201ENST00000416581 ACYP1P07311 99 aa6.78□□□□□ -1.32
LINC01398-201ENST00000416581 LINC00313P59037 77 aa6.78□□□□□ -1.32
LINC01398-201ENST00000416581 KRTAP9-8Q9BYQ0 159 aa6.78□□□□□ -1.32
LINC01398-201ENST00000416581 IGHV6-1A0A0B4J1U7 121 aa6.77□□□□□ -1.33
LINC01398-201ENST00000416581 FAM240AA0A1B0GVK7 77 aa6.77□□□□□ -1.33
LINC01398-201ENST00000416581 C8orf87E5RJ46 101 aa6.76□□□□□ -1.33
LINC01398-201ENST00000416581 BPY2O14599 106 aa6.76□□□□□ -1.33
LINC01398-201ENST00000416581 DSCR10P59022 87 aa6.76□□□□□ -1.33
LINC01398-201ENST00000416581 USH2AO75445 5202 aa6.76□□□□□ -1.33
LINC01398-201ENST00000416581 SSPOA2VEC9 5147 aa6.76□□□□□ -1.33
LINC01398-201ENST00000416581 IGKV3D-7A0A0C4DH55 119 aa6.74□□□□□ -1.33
LINC01398-201ENST00000416581 PRR15Q8IV56 129 aa6.74□□□□□ -1.33
LINC01398-201ENST00000416581 MACF1Q9UPN3 7388 aaKnown RBP6.74□□□□□ -1.33
LINC01398-201ENST00000416581 SYNE2Q8WXH0 6885 aaKnown RBP6.73□□□□□ -1.33
LINC01398-201ENST00000416581 PCP4P48539 62 aa6.73□□□□□ -1.33
LINC01398-201ENST00000416581 NOTCH2NLQ7Z3S9 236 aa6.73□□□□□ -1.33
LINC01398-201ENST00000416581 J3QR89 54 aa6.71□□□□□ -1.34
LINC01398-201ENST00000416581 KRTAP16-1A8MUX0 517 aa6.7□□□□□ -1.34
LINC01398-201ENST00000416581 K7EQZ3 153 aa6.7□□□□□ -1.34
LINC01398-201ENST00000416581 C8orf17Q9NRJ1 99 aa6.7□□□□□ -1.34
LINC01398-201ENST00000416581 FCGBPQ9Y6R7 5405 aaPredicted RBP6.69□□□□□ -1.34
LINC01398-201ENST00000416581 CXCL6P80162 114 aa6.68□□□□□ -1.34
LINC01398-201ENST00000416581 MPLKIPQ8TAP9 179 aa6.68□□□□□ -1.34
LINC01398-201ENST00000416581 K7ERU9 68 aa6.67□□□□□ -1.34
LINC01398-201ENST00000416581 MT2AP02795 61 aa6.67□□□□□ -1.34
LINC01398-201ENST00000416581 MMP24-AS1A0A0U1RRL7 71 aa6.66□□□□□ -1.34
LINC01398-201ENST00000416581 HRES1P13985 223 aa6.66□□□□□ -1.34
LINC01398-201ENST00000416581 Q8N9L7 120 aa6.66□□□□□ -1.34
LINC01398-201ENST00000416581 ATP5EP2Q5VTU8 51 aa6.64□□□□□ -1.35
LINC01398-201ENST00000416581 TMEM254Q8TBM7 123 aa6.64□□□□□ -1.35
LINC01398-201ENST00000416581 KRTAP10-10P60014 251 aa6.63□□□□□ -1.35
LINC01398-201ENST00000416581 LINC00643Q86TS7 51 aa6.63□□□□□ -1.35
LINC01398-201ENST00000416581 Q8N9P0 234 aaPredicted RBP6.63□□□□□ -1.35
LINC01398-201ENST00000416581 hDV103S1A0JD37 113 aa6.62□□□□□ -1.35
LINC01398-201ENST00000416581 MRPL34Q9BQ48 92 aaKnown RBP6.61□□□□□ -1.35
LINC01398-201ENST00000416581 MT1FP04733 61 aa6.6□□□□□ -1.35
LINC01398-201ENST00000416581 CASC2Q6XLA1 102 aa6.59□□□□□ -1.35
LINC01398-201ENST00000416581 ZCCHC13Q8WW36 166 aaKnown RBP6.59□□□□□ -1.35
LINC01398-201ENST00000416581 HCG22E2RYF7 251 aa6.58□□□□□ -1.36
LINC01398-201ENST00000416581 SCGB1A1P11684 91 aa6.58□□□□□ -1.36
LINC01398-201ENST00000416581 WFDC13Q8IUB5 93 aa6.58□□□□□ -1.36
LINC01398-201ENST00000416581 KRTAP19-1Q8IUB9 90 aa6.57□□□□□ -1.36
LINC01398-201ENST00000416581 KRTAP9-3Q9BYQ3 159 aa6.57□□□□□ -1.36
LINC01398-201ENST00000416581 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
LINC01398-201ENST00000416581 SPINK7P58062 85 aa6.54□□□□□ -1.36
LINC01398-201ENST00000416581 HIST1H4AP62805 103 aaKnown RBP6.54□□□□□ -1.36
LINC01398-201ENST00000416581 NDUFS5O43920 106 aa6.53□□□□□ -1.36
LINC01398-201ENST00000416581 A0A087WVE0 104 aa6.46□□□□□ -1.38
LINC01398-201ENST00000416581 TP53AIP1Q9HCN2 124 aa6.46□□□□□ -1.38
LINC01398-201ENST00000416581 KRTAP19-6Q3LI70 58 aa6.45□□□□□ -1.38
LINC01398-201ENST00000416581 Q5W150 140 aa6.44□□□□□ -1.38
LINC01398-201ENST00000416581 IMUPQ9GZP8 106 aa6.44□□□□□ -1.38
LINC01398-201ENST00000416581 MT-ATP8P03928 68 aa6.42□□□□□ -1.38
LINC01398-201ENST00000416581 NEBP20929 6669 aa6.39□□□□□ -1.39
LINC01398-201ENST00000416581 KRTAP6-3Q3LI67 103 aa6.38□□□□□ -1.39
LINC01398-201ENST00000416581 UQCRQO14949 82 aa6.36□□□□□ -1.39
LINC01398-201ENST00000416581 H1FX-AS1Q4G0G2 97 aa6.36□□□□□ -1.39
LINC01398-201ENST00000416581 C7orf65Q6ZTY9 151 aa6.36□□□□□ -1.39
LINC01398-201ENST00000416581 IGKV2D-30A0A075B6S6 120 aa6.35□□□□□ -1.39
LINC01398-201ENST00000416581 IGKV2-30P06310 120 aa6.35□□□□□ -1.39
LINC01398-201ENST00000416581 TRAV22A0A0B4J277 110 aa6.34□□□□□ -1.39
LINC01398-201ENST00000416581 OCR1Q9BZK8 76 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms