RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.96□□□□□ -1.3
SCN4B-202ENST00000415030 Q96NJ1 140 aa6.95□□□□□ -1.3
SCN4B-202ENST00000415030 ZFHX3Q15911 3703 aa6.95□□□□□ -1.3
SCN4B-202ENST00000415030 KRTAP21-3Q3LHN1 58 aa6.95□□□□□ -1.3
SCN4B-202ENST00000415030 KRTAP13-1Q8IUC0 172 aa6.94□□□□□ -1.3
SCN4B-202ENST00000415030 ASB16-AS1Q495Z4 193 aa6.93□□□□□ -1.3
SCN4B-202ENST00000415030 K7ERS5 55 aa6.92□□□□□ -1.3
SCN4B-202ENST00000415030 IGLV7-43P04211 117 aa6.92□□□□□ -1.3
SCN4B-202ENST00000415030 DMAC1Q96GE9 116 aa6.91□□□□□ -1.3
SCN4B-202ENST00000415030 FLG2Q5D862 2391 aaPredicted RBP6.91□□□□□ -1.3
SCN4B-202ENST00000415030 TENM1Q9UKZ4 2725 aa6.9□□□□□ -1.3
SCN4B-202ENST00000415030 PLAC8Q9NZF1 115 aa6.89□□□□□ -1.31
SCN4B-202ENST00000415030 PANO1I0J062 215 aa6.88□□□□□ -1.31
SCN4B-202ENST00000415030 Q5W150 140 aa6.88□□□□□ -1.31
SCN4B-202ENST00000415030 VPS13CQ709C8 3753 aa6.88□□□□□ -1.31
SCN4B-202ENST00000415030 LINC01554Q52M75 96 aa6.86□□□□□ -1.31
SCN4B-202ENST00000415030 A0A087X002 238 aa6.86□□□□□ -1.31
SCN4B-202ENST00000415030 NOTCH2NLQ7Z3S9 236 aa6.86□□□□□ -1.31
SCN4B-202ENST00000415030 LINC00304Q8N9R0 145 aa6.86□□□□□ -1.31
SCN4B-202ENST00000415030 PRAC1Q96KF2 57 aa6.86□□□□□ -1.31
SCN4B-202ENST00000415030 OTOGQ6ZRI0 2925 aa6.85□□□□□ -1.31
SCN4B-202ENST00000415030 TENM2Q9NT68 2774 aa6.84□□□□□ -1.31
SCN4B-202ENST00000415030 SPATA8Q6RVD6 105 aa6.83□□□□□ -1.32
SCN4B-202ENST00000415030 FBN1P35555 2871 aaKnown RBP6.82□□□□□ -1.32
SCN4B-202ENST00000415030 CSMD2Q7Z408 3487 aa6.82□□□□□ -1.32
SCN4B-202ENST00000415030 CUBNO60494 3623 aa6.81□□□□□ -1.32
SCN4B-202ENST00000415030 PDZD2O15018 2839 aa6.79□□□□□ -1.32
SCN4B-202ENST00000415030 Q6ZRN7 208 aaPredicted RBP6.79□□□□□ -1.32
SCN4B-202ENST00000415030 VWFP04275 2813 aa6.79□□□□□ -1.32
SCN4B-202ENST00000415030 ANK3Q12955 4377 aaKnown RBP6.76□□□□□ -1.33
SCN4B-202ENST00000415030 KRTAP10-2P60368 255 aa6.76□□□□□ -1.33
SCN4B-202ENST00000415030 C9orf92A6NGG3 77 aa6.74□□□□□ -1.33
SCN4B-202ENST00000415030 TGP01266 2768 aa6.73□□□□□ -1.33
SCN4B-202ENST00000415030 COX6B2Q6YFQ2 88 aa6.73□□□□□ -1.33
SCN4B-202ENST00000415030 KRTAP10-1P60331 282 aa6.73□□□□□ -1.33
SCN4B-202ENST00000415030 AKAP9Q99996 3911 aa6.7□□□□□ -1.34
SCN4B-202ENST00000415030 Q5VSD8 79 aa6.7□□□□□ -1.34
SCN4B-202ENST00000415030 CSAG1Q6PB30 78 aa6.69□□□□□ -1.34
SCN4B-202ENST00000415030 Q8N1X5 172 aa6.69□□□□□ -1.34
SCN4B-202ENST00000415030 KRTAP13-3Q3SY46 172 aa6.66□□□□□ -1.34
SCN4B-202ENST00000415030 ADM2Q7Z4H4 148 aa6.66□□□□□ -1.34
SCN4B-202ENST00000415030 NBPF19A0A087WUL8 3843 aa6.65□□□□□ -1.34
SCN4B-202ENST00000415030 SRRM2Q9UQ35 2752 aaKnown RBP6.64□□□□□ -1.35
SCN4B-202ENST00000415030 A0A1B0GU33 70 aa6.62□□□□□ -1.35
SCN4B-202ENST00000415030 ZNF469Q96JG9 3925 aaPredicted RBP6.57□□□□□ -1.36
SCN4B-202ENST00000415030 KRTAP13-2Q52LG2 175 aa6.54□□□□□ -1.36
SCN4B-202ENST00000415030 Q6ZSA8 131 aa6.51□□□□□ -1.37
SCN4B-202ENST00000415030 H1FX-AS1Q4G0G2 97 aa6.5□□□□□ -1.37
SCN4B-202ENST00000415030 KRTAP16-1A8MUX0 517 aa6.5□□□□□ -1.37
SCN4B-202ENST00000415030 TRRAPQ9Y4A5 3859 aa6.49□□□□□ -1.37
SCN4B-202ENST00000415030 KRTAP25-1Q3LHN0 102 aa6.47□□□□□ -1.37
SCN4B-202ENST00000415030 SPINT4Q6UDR6 99 aa6.46□□□□□ -1.37
SCN4B-202ENST00000415030 RPS29P62273 56 aaKnown RBP6.45□□□□□ -1.38
SCN4B-202ENST00000415030 M0R2T5 61 aa6.43□□□□□ -1.38
SCN4B-202ENST00000415030 A0A0D9SG42 100 aa6.4□□□□□ -1.38
SCN4B-202ENST00000415030 A8MUU9 505 aa6.4□□□□□ -1.39
SCN4B-202ENST00000415030 ROMO1P60602 79 aa6.38□□□□□ -1.39
SCN4B-202ENST00000415030 KRTAP1-4P0C5Y4 121 aa6.37□□□□□ -1.39
SCN4B-202ENST00000415030 CRIPTQ9P021 101 aa6.37□□□□□ -1.39
SCN4B-202ENST00000415030 H0YAA0 97 aa6.36□□□□□ -1.39
SCN4B-202ENST00000415030 RPL37P61927 97 aaKnown RBP6.36□□□□□ -1.39
SCN4B-202ENST00000415030 SEC61BP60468 96 aaKnown RBP6.35□□□□□ -1.39
SCN4B-202ENST00000415030 C20orf166-AS1Q96NR2 134 aa6.32□□□□□ -1.4
SCN4B-202ENST00000415030 FBN3Q75N90 2809 aa6.3□□□□□ -1.4
SCN4B-202ENST00000415030 HUWE1Q7Z6Z7 4374 aaKnown RBP6.27□□□□□ -1.41
SCN4B-202ENST00000415030 S4R3F8 94 aa6.23□□□□□ -1.41
SCN4B-202ENST00000415030 COL7A1Q02388 2944 aa6.22□□□□□ -1.41
SCN4B-202ENST00000415030 A0A0A0MQY5 61 aa6.21□□□□□ -1.42
SCN4B-202ENST00000415030 DNAH1Q9P2D7 4330 aa6.13□□□□□ -1.43
SCN4B-202ENST00000415030 DNAH10Q8IVF4 4471 aa6.13□□□□□ -1.43
SCN4B-202ENST00000415030 KRTAP3-1Q9BYR8 98 aa6.1□□□□□ -1.43
SCN4B-202ENST00000415030 ALMS1Q8TCU4 4167 aa6.05□□□□□ -1.44
SCN4B-202ENST00000415030 MEGF8Q7Z7M0 2845 aa6.05□□□□□ -1.44
SCN4B-202ENST00000415030 CSMD3Q7Z407 3707 aa6.02□□□□□ -1.45
SCN4B-202ENST00000415030 NDUFAF8A1L188 74 aa6.01□□□□□ -1.45
SCN4B-202ENST00000415030 DNAH9Q9NYC9 4486 aa6.01□□□□□ -1.45
SCN4B-202ENST00000415030 A0A1B0GVY2 172 aa6□□□□□ -1.45
SCN4B-202ENST00000415030 M0QZ58 72 aa6□□□□□ -1.45
SCN4B-202ENST00000415030 DNAH3Q8TD57 4116 aa6□□□□□ -1.45
SCN4B-202ENST00000415030 CAMK2N1Q7Z7J9 78 aa5.99□□□□□ -1.45
SCN4B-202ENST00000415030 PLECQ15149 4684 aaKnown RBP5.97□□□□□ -1.45
SCN4B-202ENST00000415030 R4GN34 69 aa5.96□□□□□ -1.46
SCN4B-202ENST00000415030 DNAH8Q96JB1 4490 aa5.96□□□□□ -1.46
SCN4B-202ENST00000415030 C10orf95Q9H7T3 257 aa5.95□□□□□ -1.46
SCN4B-202ENST00000415030 ANK2Q01484 3957 aa5.95□□□□□ -1.46
SCN4B-202ENST00000415030 DNAH17Q9UFH2 4485 aa5.94□□□□□ -1.46
SCN4B-202ENST00000415030 LUZP6Q538Z0 58 aa5.93□□□□□ -1.46
SCN4B-202ENST00000415030 VPS13DQ5THJ4 4388 aa5.93□□□□□ -1.46
SCN4B-202ENST00000415030 KRTAP10-6P60371 365 aaPredicted RBP5.91□□□□□ -1.46
SCN4B-202ENST00000415030 TPRXLQ17RH7 258 aa5.9□□□□□ -1.46
SCN4B-202ENST00000415030 P0C880 135 aa5.89□□□□□ -1.47
SCN4B-202ENST00000415030 CMYA5Q8N3K9 4069 aa5.88□□□□□ -1.47
SCN4B-202ENST00000415030 XP32Q5T750 250 aa5.88□□□□□ -1.47
SCN4B-202ENST00000415030 KRTAP13-4Q3LI77 160 aa5.86□□□□□ -1.47
SCN4B-202ENST00000415030 DYNC2H1Q8NCM8 4307 aaKnown RBP5.85□□□□□ -1.47
SCN4B-202ENST00000415030 KRTAP12-2P59991 146 aa5.81□□□□□ -1.48
SCN4B-202ENST00000415030 KRTAP10-8P60410 259 aa5.8□□□□□ -1.48
SCN4B-202ENST00000415030 KRTAP3-3Q9BYR6 98 aa5.8□□□□□ -1.48
SCN4B-202ENST00000415030 KRTAP3-2Q9BYR7 98 aa5.8□□□□□ -1.48
SCN4B-202ENST00000415030 KRTAP12-1P59990 96 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms