RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 PRO0461Q9UI25 63 aa4.67□□□□□ -1.66
HERPUD2-203ENST00000413517 IGLV8-61A0A075B6I0 122 aa4.66□□□□□ -1.66
HERPUD2-203ENST00000413517 IGKV2D-30A0A075B6S6 120 aa4.66□□□□□ -1.66
HERPUD2-203ENST00000413517 C1orf195Q5TG92 126 aa4.66□□□□□ -1.66
HERPUD2-203ENST00000413517 A0A0B4J2C4 111 aa4.65□□□□□ -1.67
HERPUD2-203ENST00000413517 C9orf92A6NGG3 77 aa4.65□□□□□ -1.67
HERPUD2-203ENST00000413517 K7ERJ3 54 aa4.65□□□□□ -1.67
HERPUD2-203ENST00000413517 SNCGO76070 127 aa4.65□□□□□ -1.67
HERPUD2-203ENST00000413517 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.65□□□□□ -1.67
HERPUD2-203ENST00000413517 A0A0U1RQV1 116 aa4.64□□□□□ -1.67
HERPUD2-203ENST00000413517 SCGB1C2P0DMR2 95 aa4.64□□□□□ -1.67
HERPUD2-203ENST00000413517 IGFL1Q6UW32 110 aa4.64□□□□□ -1.67
HERPUD2-203ENST00000413517 F8WEM9 126 aa4.63□□□□□ -1.67
HERPUD2-203ENST00000413517 PSMB2P49721 201 aa4.63□□□□□ -1.67
HERPUD2-203ENST00000413517 MT-ATP8P03928 68 aa4.62□□□□□ -1.67
HERPUD2-203ENST00000413517 CLEC2BQ92478 149 aa4.62□□□□□ -1.67
HERPUD2-203ENST00000413517 FAT4Q6V0I7 4981 aa4.62□□□□□ -1.67
HERPUD2-203ENST00000413517 TRBV7-7A0A0K0K1E9 115 aa4.61□□□□□ -1.67
HERPUD2-203ENST00000413517 Q6JHZ5 121 aa4.61□□□□□ -1.67
HERPUD2-203ENST00000413517 SS18L2Q9UHA2 77 aa4.61□□□□□ -1.67
HERPUD2-203ENST00000413517 PRO1854Q9UHT4 67 aa4.61□□□□□ -1.67
HERPUD2-203ENST00000413517 KRTAP19-2Q3LHN2 52 aa4.6□□□□□ -1.67
HERPUD2-203ENST00000413517 PCOTHQ58A44 107 aa4.6□□□□□ -1.67
HERPUD2-203ENST00000413517 H0YGX0 51 aa4.59□□□□□ -1.67
HERPUD2-203ENST00000413517 ATXN8Q156A1 80 aa4.59□□□□□ -1.67
HERPUD2-203ENST00000413517 FAM240AA0A1B0GVK7 77 aa4.58□□□□□ -1.68
HERPUD2-203ENST00000413517 TCL1BO95988 128 aa4.58□□□□□ -1.68
HERPUD2-203ENST00000413517 ANKRD29Q8N6D5 301 aa4.58□□□□□ -1.68
HERPUD2-203ENST00000413517 Q8N9P0 234 aaPredicted RBP4.58□□□□□ -1.68
HERPUD2-203ENST00000413517 NDUFAF8A1L188 74 aa4.57□□□□□ -1.68
HERPUD2-203ENST00000413517 ACYP1P07311 99 aa4.57□□□□□ -1.68
HERPUD2-203ENST00000413517 IMUPQ9GZP8 106 aa4.57□□□□□ -1.68
HERPUD2-203ENST00000413517 H3BT86 120 aa4.56□□□□□ -1.68
HERPUD2-203ENST00000413517 COX6CP09669 75 aa4.56□□□□□ -1.68
HERPUD2-203ENST00000413517 A0A1B0GX51 115 aa4.55□□□□□ -1.68
HERPUD2-203ENST00000413517 RPL37P61927 97 aaKnown RBP4.55□□□□□ -1.68
HERPUD2-203ENST00000413517 C9JAW5 83 aa4.54□□□□□ -1.68
HERPUD2-203ENST00000413517 SMIM20Q8N5G0 67 aa4.54□□□□□ -1.68
HERPUD2-203ENST00000413517 A0A1W2PNM2 257 aa4.53□□□□□ -1.68
HERPUD2-203ENST00000413517 Q96NJ1 140 aa4.53□□□□□ -1.68
HERPUD2-203ENST00000413517 CCDC179H3BU77 68 aa4.52□□□□□ -1.69
HERPUD2-203ENST00000413517 A0A087WSZ3 146 aa4.51□□□□□ -1.69
HERPUD2-203ENST00000413517 LST1O00453 97 aa4.51□□□□□ -1.69
HERPUD2-203ENST00000413517 OBSCN-AS1Q96MR7 158 aa4.51□□□□□ -1.69
HERPUD2-203ENST00000413517 J3KT08 172 aa4.5□□□□□ -1.69
HERPUD2-203ENST00000413517 MT1HP80294 61 aa4.5□□□□□ -1.69
HERPUD2-203ENST00000413517 ORMDL1Q9P0S3 153 aa4.5□□□□□ -1.69
HERPUD2-203ENST00000413517 UQCRQO14949 82 aa4.49□□□□□ -1.69
HERPUD2-203ENST00000413517 RPS28P62857 69 aaKnown RBP4.49□□□□□ -1.69
HERPUD2-203ENST00000413517 LINC00643Q86TS7 51 aa4.49□□□□□ -1.69
HERPUD2-203ENST00000413517 DNAL4O96015 105 aa4.48□□□□□ -1.69
HERPUD2-203ENST00000413517 TRACP01848 142 aa4.47□□□□□ -1.69
HERPUD2-203ENST00000413517 TRBV7-4A0A0J9YYF1 115 aa4.46□□□□□ -1.7
HERPUD2-203ENST00000413517 ATOX1O00244 68 aa4.46□□□□□ -1.7
HERPUD2-203ENST00000413517 TMEM256-PLSCR3K7ERE1 68 aa4.45□□□□□ -1.7
HERPUD2-203ENST00000413517 DSCR10P59022 87 aa4.45□□□□□ -1.7
HERPUD2-203ENST00000413517 C20orf166-AS1Q96NR2 134 aa4.45□□□□□ -1.7
HERPUD2-203ENST00000413517 FAM236AA0A1B0GUQ0 79 aa4.44□□□□□ -1.7
HERPUD2-203ENST00000413517 FAM236BA0A1B0GV22 79 aa4.44□□□□□ -1.7
HERPUD2-203ENST00000413517 A8MUU9 505 aa4.44□□□□□ -1.7
HERPUD2-203ENST00000413517 H3BQ85 93 aa4.44□□□□□ -1.7
HERPUD2-203ENST00000413517 CCKP06307 115 aa4.44□□□□□ -1.7
HERPUD2-203ENST00000413517 COX7CP15954 63 aa4.44□□□□□ -1.7
HERPUD2-203ENST00000413517 TMEM258P61165 79 aa4.44□□□□□ -1.7
HERPUD2-203ENST00000413517 SMIM26A0A096LP01 95 aa4.43□□□□□ -1.7
HERPUD2-203ENST00000413517 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
HERPUD2-203ENST00000413517 DEFB116Q30KQ4 102 aa4.43□□□□□ -1.7
HERPUD2-203ENST00000413517 LINC00472Q9H8W2 130 aa4.43□□□□□ -1.7
HERPUD2-203ENST00000413517 FLGP20930 4061 aaPredicted RBP4.43□□□□□ -1.7
HERPUD2-203ENST00000413517 IGKV4-1P06312 121 aa4.42□□□□□ -1.7
HERPUD2-203ENST00000413517 BAALC-AS2P0C853 105 aa4.42□□□□□ -1.7
HERPUD2-203ENST00000413517 ATP11AUNQ6ZP68 121 aa4.41□□□□□ -1.7
HERPUD2-203ENST00000413517 CAMK2N1Q7Z7J9 78 aa4.41□□□□□ -1.7
HERPUD2-203ENST00000413517 PSPHP1O15172 72 aa4.4□□□□□ -1.71
HERPUD2-203ENST00000413517 KRTAP10-6P60371 365 aaPredicted RBP4.4□□□□□ -1.71
HERPUD2-203ENST00000413517 RBM3P98179 157 aaKnown RBP4.4□□□□□ -1.71
HERPUD2-203ENST00000413517 NDUFS5O43920 106 aa4.39□□□□□ -1.71
HERPUD2-203ENST00000413517 COX6B2Q6YFQ2 88 aa4.39□□□□□ -1.71
HERPUD2-203ENST00000413517 LINC00313P59037 77 aa4.38□□□□□ -1.71
HERPUD2-203ENST00000413517 HIST1H4AP62805 103 aaKnown RBP4.38□□□□□ -1.71
HERPUD2-203ENST00000413517 ATP5EP2Q5VTU8 51 aa4.38□□□□□ -1.71
HERPUD2-203ENST00000413517 IGHV6-1A0A0B4J1U7 121 aa4.37□□□□□ -1.71
HERPUD2-203ENST00000413517 Q6ZQT0 140 aa4.37□□□□□ -1.71
HERPUD2-203ENST00000413517 SERP2Q8N6R1 65 aa4.37□□□□□ -1.71
HERPUD2-203ENST00000413517 DSCR8Q96T75 97 aa4.37□□□□□ -1.71
HERPUD2-203ENST00000413517 A0A1B0GVX0 72 aa4.35□□□□□ -1.71
HERPUD2-203ENST00000413517 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
HERPUD2-203ENST00000413517 LOC110117498A0A087WWA1 95 aa4.34□□□□□ -1.71
HERPUD2-203ENST00000413517 C4orf26Q17RF5 130 aa4.34□□□□□ -1.71
HERPUD2-203ENST00000413517 C14orf132Q9NPU4 83 aa4.34□□□□□ -1.71
HERPUD2-203ENST00000413517 M0R2T5 61 aa4.33□□□□□ -1.72
HERPUD2-203ENST00000413517 JMJD7-PLA2G4BH0Y9G9 81 aa4.32□□□□□ -1.72
HERPUD2-203ENST00000413517 HRES1P13985 223 aa4.32□□□□□ -1.72
HERPUD2-203ENST00000413517 C8orf87E5RJ46 101 aa4.31□□□□□ -1.72
HERPUD2-203ENST00000413517 ATP5EP56381 51 aaPredicted RBP4.31□□□□□ -1.72
HERPUD2-203ENST00000413517 SERP1Q9Y6X1 66 aa4.3□□□□□ -1.72
HERPUD2-203ENST00000413517 IGKV3D-7A0A0C4DH55 119 aa4.29□□□□□ -1.72
HERPUD2-203ENST00000413517 FAM236DA0A1B0GTK5 79 aa4.28□□□□□ -1.72
HERPUD2-203ENST00000413517 A8MWP4 228 aa4.28□□□□□ -1.72
HERPUD2-203ENST00000413517 NDUFC1O43677 76 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms