RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 Q8N9L7 120 aa4.73□□□□□ -1.65
HDAC9-207ENST00000413509 LINC00304Q8N9R0 145 aa4.73□□□□□ -1.65
HDAC9-207ENST00000413509 FAM236AA0A1B0GUQ0 79 aa4.72□□□□□ -1.65
HDAC9-207ENST00000413509 FAM236BA0A1B0GV22 79 aa4.72□□□□□ -1.65
HDAC9-207ENST00000413509 DEFB116Q30KQ4 102 aa4.72□□□□□ -1.65
HDAC9-207ENST00000413509 PRR15Q8IV56 129 aa4.72□□□□□ -1.65
HDAC9-207ENST00000413509 LIMD2Q9BT23 127 aa4.72□□□□□ -1.65
HDAC9-207ENST00000413509 C1orf195Q5TG92 126 aa4.71□□□□□ -1.66
HDAC9-207ENST00000413509 PCP4P48539 62 aa4.7□□□□□ -1.66
HDAC9-207ENST00000413509 A0A1B0GVX0 72 aa4.68□□□□□ -1.66
HDAC9-207ENST00000413509 KRTAP29-1A8MX34 341 aaPredicted RBP4.68□□□□□ -1.66
HDAC9-207ENST00000413509 ATOX1O00244 68 aa4.68□□□□□ -1.66
HDAC9-207ENST00000413509 MT1HL1P0DM35 61 aa4.68□□□□□ -1.66
HDAC9-207ENST00000413509 KRTAP4-5Q9BYR2 181 aa4.68□□□□□ -1.66
HDAC9-207ENST00000413509 MMP24-AS1A0A0U1RRL7 71 aa4.67□□□□□ -1.66
HDAC9-207ENST00000413509 HCG22E2RYF7 251 aa4.67□□□□□ -1.66
HDAC9-207ENST00000413509 NDUFB1O75438 58 aa4.66□□□□□ -1.66
HDAC9-207ENST00000413509 ABCA13Q86UQ4 5058 aa4.66□□□□□ -1.66
HDAC9-207ENST00000413509 OXTP01178 125 aa4.65□□□□□ -1.67
HDAC9-207ENST00000413509 DMBT1Q9UGM3 2413 aaPredicted RBP4.64□□□□□ -1.67
HDAC9-207ENST00000413509 SMIM20Q8N5G0 67 aa4.64□□□□□ -1.67
HDAC9-207ENST00000413509 ANAPC13Q9BS18 74 aa4.64□□□□□ -1.67
HDAC9-207ENST00000413509 OCR1Q9BZK8 76 aa4.64□□□□□ -1.67
HDAC9-207ENST00000413509 C8orf17Q9NRJ1 99 aa4.64□□□□□ -1.67
HDAC9-207ENST00000413509 C8orf87E5RJ46 101 aa4.63□□□□□ -1.67
HDAC9-207ENST00000413509 NOTCH2NLQ7Z3S9 236 aa4.63□□□□□ -1.67
HDAC9-207ENST00000413509 TRAV7A0A075B6U4 112 aa4.62□□□□□ -1.67
HDAC9-207ENST00000413509 IGHV6-1A0A0B4J1U7 121 aa4.62□□□□□ -1.67
HDAC9-207ENST00000413509 CASC2Q6XLA1 102 aa4.62□□□□□ -1.67
HDAC9-207ENST00000413509 SERP2Q8N6R1 65 aa4.62□□□□□ -1.67
HDAC9-207ENST00000413509 hDV103S1A0JD37 113 aa4.61□□□□□ -1.67
HDAC9-207ENST00000413509 TMEM254Q8TBM7 123 aa4.61□□□□□ -1.67
HDAC9-207ENST00000413509 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
HDAC9-207ENST00000413509 KRTAP16-1A8MUX0 517 aa4.6□□□□□ -1.67
HDAC9-207ENST00000413509 WFDC13Q8IUB5 93 aa4.6□□□□□ -1.67
HDAC9-207ENST00000413509 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
HDAC9-207ENST00000413509 COX7CP15954 63 aa4.59□□□□□ -1.67
HDAC9-207ENST00000413509 UQCRQO14949 82 aa4.58□□□□□ -1.68
HDAC9-207ENST00000413509 LINC00313P59037 77 aa4.58□□□□□ -1.68
HDAC9-207ENST00000413509 MRPL34Q9BQ48 92 aaKnown RBP4.58□□□□□ -1.68
HDAC9-207ENST00000413509 FP248Q71RG6 208 aaPredicted RBP4.57□□□□□ -1.68
HDAC9-207ENST00000413509 Q8N9P0 234 aaPredicted RBP4.57□□□□□ -1.68
HDAC9-207ENST00000413509 CCDC179H3BU77 68 aa4.56□□□□□ -1.68
HDAC9-207ENST00000413509 RETNLBQ9BQ08 111 aa4.55□□□□□ -1.68
HDAC9-207ENST00000413509 TP53AIP1Q9HCN2 124 aa4.55□□□□□ -1.68
HDAC9-207ENST00000413509 KRTAP13-3Q3SY46 172 aa4.54□□□□□ -1.68
HDAC9-207ENST00000413509 C5orf47Q569G3 176 aa4.53□□□□□ -1.68
HDAC9-207ENST00000413509 A0A0U1RQV1 116 aa4.52□□□□□ -1.69
HDAC9-207ENST00000413509 KLKP1Q107X0 134 aa4.52□□□□□ -1.69
HDAC9-207ENST00000413509 ZCCHC13Q8WW36 166 aaKnown RBP4.52□□□□□ -1.69
HDAC9-207ENST00000413509 A8MUU9 505 aa4.51□□□□□ -1.69
HDAC9-207ENST00000413509 C20orf166-AS1Q96NR2 134 aa4.51□□□□□ -1.69
HDAC9-207ENST00000413509 TRAV22A0A0B4J277 110 aa4.5□□□□□ -1.69
HDAC9-207ENST00000413509 H3BPC8 53 aa4.5□□□□□ -1.69
HDAC9-207ENST00000413509 C20orf197Q8N268 126 aa4.5□□□□□ -1.69
HDAC9-207ENST00000413509 CYSTM1Q9H1C7 97 aa4.5□□□□□ -1.69
HDAC9-207ENST00000413509 IGLV7-46A0A075B6I9 117 aa4.49□□□□□ -1.69
HDAC9-207ENST00000413509 H0Y9P7 68 aa4.49□□□□□ -1.69
HDAC9-207ENST00000413509 HERC1Q15751 4861 aa4.49□□□□□ -1.69
HDAC9-207ENST00000413509 NDUFS5O43920 106 aa4.48□□□□□ -1.69
HDAC9-207ENST00000413509 Q5W150 140 aa4.48□□□□□ -1.69
HDAC9-207ENST00000413509 C9orf92A6NGG3 77 aa4.47□□□□□ -1.69
HDAC9-207ENST00000413509 MP68P56378 58 aa4.47□□□□□ -1.69
HDAC9-207ENST00000413509 Q75L30 129 aa4.47□□□□□ -1.69
HDAC9-207ENST00000413509 TPRXLQ17RH7 258 aa4.46□□□□□ -1.7
HDAC9-207ENST00000413509 SNURFQ9Y675 71 aa4.46□□□□□ -1.7
HDAC9-207ENST00000413509 H7BZZ5 65 aa4.45□□□□□ -1.7
HDAC9-207ENST00000413509 NDUFC1O43677 76 aa4.45□□□□□ -1.7
HDAC9-207ENST00000413509 XP32Q5T750 250 aa4.44□□□□□ -1.7
HDAC9-207ENST00000413509 C1orf64Q8NEQ6 169 aa4.44□□□□□ -1.7
HDAC9-207ENST00000413509 LINC00208Q96KT6 92 aa4.44□□□□□ -1.7
HDAC9-207ENST00000413509 PRR4Q16378 134 aa4.43□□□□□ -1.7
HDAC9-207ENST00000413509 LOC101927531A0A1B0GV80 90 aa4.42□□□□□ -1.7
HDAC9-207ENST00000413509 IGKV2-30P06310 120 aa4.41□□□□□ -1.7
HDAC9-207ENST00000413509 RPL37P61927 97 aaKnown RBP4.41□□□□□ -1.7
HDAC9-207ENST00000413509 LRP2P98164 4655 aa4.41□□□□□ -1.7
HDAC9-207ENST00000413509 LPAP08519 4548 aa4.4□□□□□ -1.7
HDAC9-207ENST00000413509 TMEM258P61165 79 aa4.4□□□□□ -1.71
HDAC9-207ENST00000413509 CYP4F30PQ9H0H9 118 aa4.4□□□□□ -1.71
HDAC9-207ENST00000413509 SPANXA2-OT1Q8N9U9 137 aa4.38□□□□□ -1.71
HDAC9-207ENST00000413509 HMCN2Q8NDA2 5059 aa4.38□□□□□ -1.71
HDAC9-207ENST00000413509 ATP5EP56381 51 aaPredicted RBP4.36□□□□□ -1.71
HDAC9-207ENST00000413509 MUC17Q685J3 4493 aa4.36□□□□□ -1.71
HDAC9-207ENST00000413509 C7orf65Q6ZTY9 151 aa4.35□□□□□ -1.71
HDAC9-207ENST00000413509 FAM236DA0A1B0GTK5 79 aa4.34□□□□□ -1.71
HDAC9-207ENST00000413509 FAM236CP0DP71 79 aa4.34□□□□□ -1.71
HDAC9-207ENST00000413509 ATP11AUNQ6ZP68 121 aa4.34□□□□□ -1.71
HDAC9-207ENST00000413509 IGKV2D-30A0A075B6S6 120 aa4.33□□□□□ -1.72
HDAC9-207ENST00000413509 PCOTHQ58A44 107 aa4.33□□□□□ -1.72
HDAC9-207ENST00000413509 HRES1P13985 223 aa4.31□□□□□ -1.72
HDAC9-207ENST00000413509 SPINK7P58062 85 aa4.31□□□□□ -1.72
HDAC9-207ENST00000413509 UBR4Q5T4S7 5183 aa4.29□□□□□ -1.72
HDAC9-207ENST00000413509 DMAC1Q96GE9 116 aa4.28□□□□□ -1.72
HDAC9-207ENST00000413509 SEC61BP60468 96 aaKnown RBP4.27□□□□□ -1.73
HDAC9-207ENST00000413509 RPS28P62857 69 aaKnown RBP4.27□□□□□ -1.73
HDAC9-207ENST00000413509 SERP1Q9Y6X1 66 aa4.27□□□□□ -1.73
HDAC9-207ENST00000413509 MPLKIPQ8TAP9 179 aa4.25□□□□□ -1.73
HDAC9-207ENST00000413509 A8MUN3 132 aa4.24□□□□□ -1.73
HDAC9-207ENST00000413509 KRTAP4-8Q9BYQ9 185 aa4.24□□□□□ -1.73
HDAC9-207ENST00000413509 C4orf26Q17RF5 130 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms