RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 KRTAP4-5Q9BYR2 181 aa3.83□□□□□ -1.8
VPS41-204ENST00000413141 LINC00472Q9H8W2 130 aa3.83□□□□□ -1.8
VPS41-204ENST00000413141 LRP1Q07954 4544 aaKnown RBP3.83□□□□□ -1.8
VPS41-204ENST00000413141 FAT3Q8TDW7 4589 aa3.82□□□□□ -1.8
VPS41-204ENST00000413141 ASB16-AS1Q495Z4 193 aa3.82□□□□□ -1.8
VPS41-204ENST00000413141 SPAG11AQ6PDA7 123 aa3.82□□□□□ -1.8
VPS41-204ENST00000413141 MYCBP2O75592 4640 aa3.82□□□□□ -1.8
VPS41-204ENST00000413141 DSCR10P59022 87 aa3.81□□□□□ -1.8
VPS41-204ENST00000413141 KRTAP10-8P60410 259 aa3.81□□□□□ -1.8
VPS41-204ENST00000413141 DEFB116Q30KQ4 102 aa3.81□□□□□ -1.8
VPS41-204ENST00000413141 ABCA13Q86UQ4 5058 aa3.81□□□□□ -1.8
VPS41-204ENST00000413141 J3KT08 172 aa3.8□□□□□ -1.8
VPS41-204ENST00000413141 K7EQZ3 153 aa3.8□□□□□ -1.8
VPS41-204ENST00000413141 MT1HL1P0DM35 61 aa3.8□□□□□ -1.8
VPS41-204ENST00000413141 Q8N9L7 120 aa3.8□□□□□ -1.8
VPS41-204ENST00000413141 IMUPQ9GZP8 106 aa3.8□□□□□ -1.8
VPS41-204ENST00000413141 TNXBP22105 4242 aa3.8□□□□□ -1.8
VPS41-204ENST00000413141 A0A087WVE0 104 aa3.79□□□□□ -1.8
VPS41-204ENST00000413141 OXTP01178 125 aa3.79□□□□□ -1.8
VPS41-204ENST00000413141 IGKV4-1P06312 121 aa3.79□□□□□ -1.8
VPS41-204ENST00000413141 HIST1H4AP62805 103 aaKnown RBP3.79□□□□□ -1.8
VPS41-204ENST00000413141 C1orf195Q5TG92 126 aa3.79□□□□□ -1.8
VPS41-204ENST00000413141 FLG2Q5D862 2391 aaPredicted RBP3.78□□□□□ -1.8
VPS41-204ENST00000413141 A8MWP4 228 aa3.78□□□□□ -1.8
VPS41-204ENST00000413141 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
VPS41-204ENST00000413141 FAM236AA0A1B0GUQ0 79 aa3.76□□□□□ -1.81
VPS41-204ENST00000413141 FAM236BA0A1B0GV22 79 aa3.76□□□□□ -1.81
VPS41-204ENST00000413141 KRTAP29-1A8MX34 341 aaPredicted RBP3.76□□□□□ -1.81
VPS41-204ENST00000413141 PRR15Q8IV56 129 aa3.76□□□□□ -1.81
VPS41-204ENST00000413141 A0A1B0GVX0 72 aa3.75□□□□□ -1.81
VPS41-204ENST00000413141 NDUFB1O75438 58 aa3.75□□□□□ -1.81
VPS41-204ENST00000413141 SCGB1A1P11684 91 aa3.75□□□□□ -1.81
VPS41-204ENST00000413141 IGHV6-1A0A0B4J1U7 121 aa3.74□□□□□ -1.81
VPS41-204ENST00000413141 MMP24-AS1A0A0U1RRL7 71 aa3.74□□□□□ -1.81
VPS41-204ENST00000413141 HCG22E2RYF7 251 aa3.74□□□□□ -1.81
VPS41-204ENST00000413141 RETNLBQ9BQ08 111 aa3.73□□□□□ -1.81
VPS41-204ENST00000413141 WFDC13Q8IUB5 93 aa3.72□□□□□ -1.81
VPS41-204ENST00000413141 C8orf17Q9NRJ1 99 aa3.72□□□□□ -1.81
VPS41-204ENST00000413141 C8orf87E5RJ46 101 aa3.71□□□□□ -1.82
VPS41-204ENST00000413141 CASC2Q6XLA1 102 aa3.71□□□□□ -1.82
VPS41-204ENST00000413141 NOTCH2NLQ7Z3S9 236 aa3.71□□□□□ -1.82
VPS41-204ENST00000413141 hDV103S1A0JD37 113 aa3.7□□□□□ -1.82
VPS41-204ENST00000413141 ATOX1O00244 68 aa3.7□□□□□ -1.82
VPS41-204ENST00000413141 FP248Q71RG6 208 aaPredicted RBP3.7□□□□□ -1.82
VPS41-204ENST00000413141 LINC00313P59037 77 aa3.69□□□□□ -1.82
VPS41-204ENST00000413141 TMEM254Q8TBM7 123 aa3.69□□□□□ -1.82
VPS41-204ENST00000413141 PCLOQ9Y6V0 5065 aa3.68□□□□□ -1.82
VPS41-204ENST00000413141 KRTAP16-1A8MUX0 517 aa3.68□□□□□ -1.82
VPS41-204ENST00000413141 LCE4AQ5TA78 99 aa3.68□□□□□ -1.82
VPS41-204ENST00000413141 MRPL34Q9BQ48 92 aaKnown RBP3.68□□□□□ -1.82
VPS41-204ENST00000413141 ANAPC13Q9BS18 74 aa3.67□□□□□ -1.82
VPS41-204ENST00000413141 DMBT1Q9UGM3 2413 aaPredicted RBP3.67□□□□□ -1.82
VPS41-204ENST00000413141 SMIM20Q8N5G0 67 aa3.66□□□□□ -1.82
VPS41-204ENST00000413141 OCR1Q9BZK8 76 aa3.66□□□□□ -1.82
VPS41-204ENST00000413141 IGLV7-46A0A075B6I9 117 aa3.65□□□□□ -1.83
VPS41-204ENST00000413141 TRAV7A0A075B6U4 112 aa3.65□□□□□ -1.83
VPS41-204ENST00000413141 C9orf92A6NGG3 77 aa3.65□□□□□ -1.83
VPS41-204ENST00000413141 SERP2Q8N6R1 65 aa3.65□□□□□ -1.83
VPS41-204ENST00000413141 Q8N9P0 234 aaPredicted RBP3.65□□□□□ -1.83
VPS41-204ENST00000413141 NDUFS5O43920 106 aa3.64□□□□□ -1.83
VPS41-204ENST00000413141 PRR4Q16378 134 aa3.64□□□□□ -1.83
VPS41-204ENST00000413141 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
VPS41-204ENST00000413141 KRTAP13-3Q3SY46 172 aa3.64□□□□□ -1.83
VPS41-204ENST00000413141 TP53AIP1Q9HCN2 124 aa3.63□□□□□ -1.83
VPS41-204ENST00000413141 UQCRQO14949 82 aa3.62□□□□□ -1.83
VPS41-204ENST00000413141 COX7CP15954 63 aa3.62□□□□□ -1.83
VPS41-204ENST00000413141 PCP4P48539 62 aa3.62□□□□□ -1.83
VPS41-204ENST00000413141 TPRXLQ17RH7 258 aa3.62□□□□□ -1.83
VPS41-204ENST00000413141 LCE5AQ5TCM9 118 aa3.62□□□□□ -1.83
VPS41-204ENST00000413141 C20orf166-AS1Q96NR2 134 aa3.62□□□□□ -1.83
VPS41-204ENST00000413141 A8MUU9 505 aa3.61□□□□□ -1.83
VPS41-204ENST00000413141 TRAV22A0A0B4J277 110 aa3.6□□□□□ -1.83
VPS41-204ENST00000413141 H0Y9P7 68 aa3.59□□□□□ -1.83
VPS41-204ENST00000413141 CCDC179H3BU77 68 aa3.59□□□□□ -1.83
VPS41-204ENST00000413141 C5orf47Q569G3 176 aa3.59□□□□□ -1.83
VPS41-204ENST00000413141 Q75L30 129 aa3.59□□□□□ -1.83
VPS41-204ENST00000413141 Q5W150 140 aa3.58□□□□□ -1.84
VPS41-204ENST00000413141 KRTAP5-3Q6L8H2 238 aa3.58□□□□□ -1.84
VPS41-204ENST00000413141 C20orf197Q8N268 126 aa3.58□□□□□ -1.84
VPS41-204ENST00000413141 A0A0U1RQV1 116 aa3.57□□□□□ -1.84
VPS41-204ENST00000413141 MP68P56378 58 aa3.57□□□□□ -1.84
VPS41-204ENST00000413141 RPL37P61927 97 aaKnown RBP3.57□□□□□ -1.84
VPS41-204ENST00000413141 ZCCHC13Q8WW36 166 aaKnown RBP3.57□□□□□ -1.84
VPS41-204ENST00000413141 HERC1Q15751 4861 aa3.56□□□□□ -1.84
VPS41-204ENST00000413141 KRTAP9-7A8MTY7 169 aa3.56□□□□□ -1.84
VPS41-204ENST00000413141 H3BPC8 53 aa3.56□□□□□ -1.84
VPS41-204ENST00000413141 KLKP1Q107X0 134 aa3.56□□□□□ -1.84
VPS41-204ENST00000413141 SNURFQ9Y675 71 aa3.56□□□□□ -1.84
VPS41-204ENST00000413141 LINC00208Q96KT6 92 aa3.55□□□□□ -1.84
VPS41-204ENST00000413141 CYSTM1Q9H1C7 97 aa3.55□□□□□ -1.84
VPS41-204ENST00000413141 LPAP08519 4548 aa3.55□□□□□ -1.84
VPS41-204ENST00000413141 HMCN2Q8NDA2 5059 aa3.54□□□□□ -1.84
VPS41-204ENST00000413141 LOC101927531A0A1B0GV80 90 aa3.54□□□□□ -1.84
VPS41-204ENST00000413141 C1orf64Q8NEQ6 169 aa3.54□□□□□ -1.84
VPS41-204ENST00000413141 IGKV2-30P06310 120 aa3.53□□□□□ -1.84
VPS41-204ENST00000413141 ATP11AUNQ6ZP68 121 aa3.53□□□□□ -1.84
VPS41-204ENST00000413141 LRP2P98164 4655 aa3.52□□□□□ -1.85
VPS41-204ENST00000413141 IGKV2D-30A0A075B6S6 120 aa3.51□□□□□ -1.85
VPS41-204ENST00000413141 NDUFC1O43677 76 aa3.51□□□□□ -1.85
VPS41-204ENST00000413141 C7orf65Q6ZTY9 151 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms