RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 UBE2BP63146 152 aa4.06□□□□□ -1.76
LSM8-202ENST00000411938 Q8N9L7 120 aa4.06□□□□□ -1.76
LSM8-202ENST00000411938 SERP1Q9Y6X1 66 aa4.06□□□□□ -1.76
LSM8-202ENST00000411938 IGLV7-46A0A075B6I9 117 aa4.05□□□□□ -1.76
LSM8-202ENST00000411938 F8WEM9 126 aa4.05□□□□□ -1.76
LSM8-202ENST00000411938 TPRXLQ17RH7 258 aa4.05□□□□□ -1.76
LSM8-202ENST00000411938 KRTAP11-1Q8IUC1 163 aa4.05□□□□□ -1.76
LSM8-202ENST00000411938 ST20-AS1Q8NBB2 130 aa4.05□□□□□ -1.76
LSM8-202ENST00000411938 TMEM254Q8TBM7 123 aa4.05□□□□□ -1.76
LSM8-202ENST00000411938 SPRR4Q96PI1 79 aa4.05□□□□□ -1.76
LSM8-202ENST00000411938 OCR1Q9BZK8 76 aa4.05□□□□□ -1.76
LSM8-202ENST00000411938 SNURFQ9Y675 71 aa4.05□□□□□ -1.76
LSM8-202ENST00000411938 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
LSM8-202ENST00000411938 TYMSOSQ8TAI1 123 aa4.03□□□□□ -1.76
LSM8-202ENST00000411938 IGLV8-61A0A075B6I0 122 aa4.02□□□□□ -1.77
LSM8-202ENST00000411938 C5orf47Q569G3 176 aa4.02□□□□□ -1.77
LSM8-202ENST00000411938 Q5XG85 94 aa4.02□□□□□ -1.77
LSM8-202ENST00000411938 SMIM29Q86T20 159 aa4.02□□□□□ -1.77
LSM8-202ENST00000411938 A0A087X002 238 aa4□□□□□ -1.77
LSM8-202ENST00000411938 DSCR10P59022 87 aa4□□□□□ -1.77
LSM8-202ENST00000411938 PRLHP81277 87 aa4□□□□□ -1.77
LSM8-202ENST00000411938 IGFL1Q6UW32 110 aa4□□□□□ -1.77
LSM8-202ENST00000411938 KRTAP4-1Q9BYQ7 146 aa4□□□□□ -1.77
LSM8-202ENST00000411938 K7EQZ3 153 aa3.99□□□□□ -1.77
LSM8-202ENST00000411938 SPRR1BP22528 89 aa3.99□□□□□ -1.77
LSM8-202ENST00000411938 ASB16-AS1Q495Z4 193 aa3.99□□□□□ -1.77
LSM8-202ENST00000411938 HIGD2AQ9BW72 106 aa3.99□□□□□ -1.77
LSM8-202ENST00000411938 SMIM26A0A096LP01 95 aa3.98□□□□□ -1.77
LSM8-202ENST00000411938 HCG22E2RYF7 251 aa3.98□□□□□ -1.77
LSM8-202ENST00000411938 ZNF861PO60384 105 aa3.98□□□□□ -1.77
LSM8-202ENST00000411938 UBE2AP49459 152 aa3.98□□□□□ -1.77
LSM8-202ENST00000411938 LCE2CQ5TA81 110 aa3.97□□□□□ -1.77
LSM8-202ENST00000411938 LINC00304Q8N9R0 145 aa3.97□□□□□ -1.77
LSM8-202ENST00000411938 A0A087WSZ3 146 aa3.96□□□□□ -1.78
LSM8-202ENST00000411938 SEC61BP60468 96 aaKnown RBP3.96□□□□□ -1.78
LSM8-202ENST00000411938 C4orf26Q17RF5 130 aa3.96□□□□□ -1.78
LSM8-202ENST00000411938 HRCT1Q6UXD1 115 aa3.96□□□□□ -1.78
LSM8-202ENST00000411938 ZCCHC13Q8WW36 166 aaKnown RBP3.96□□□□□ -1.78
LSM8-202ENST00000411938 MT1HP80294 61 aa3.95□□□□□ -1.78
LSM8-202ENST00000411938 ANAPC11Q9NYG5 84 aa3.95□□□□□ -1.78
LSM8-202ENST00000411938 A0A0G2JQZ4 141 aa3.94□□□□□ -1.78
LSM8-202ENST00000411938 LORP23490 312 aaPredicted RBP3.94□□□□□ -1.78
LSM8-202ENST00000411938 KRTAP10-6P60371 365 aaPredicted RBP3.94□□□□□ -1.78
LSM8-202ENST00000411938 KRTAP13-2Q52LG2 175 aa3.94□□□□□ -1.78
LSM8-202ENST00000411938 FP248Q71RG6 208 aaPredicted RBP3.94□□□□□ -1.78
LSM8-202ENST00000411938 WFDC13Q8IUB5 93 aa3.93□□□□□ -1.78
LSM8-202ENST00000411938 KRTAP13-1Q8IUC0 172 aa3.93□□□□□ -1.78
LSM8-202ENST00000411938 KRTAP13-3Q3SY46 172 aa3.92□□□□□ -1.78
LSM8-202ENST00000411938 A8MWP4 228 aa3.91□□□□□ -1.78
LSM8-202ENST00000411938 NDUFB1O75438 58 aa3.91□□□□□ -1.78
LSM8-202ENST00000411938 MP68P56378 58 aa3.91□□□□□ -1.78
LSM8-202ENST00000411938 PRR15Q8IV56 129 aa3.91□□□□□ -1.78
LSM8-202ENST00000411938 CYP4F30PQ9H0H9 118 aa3.91□□□□□ -1.78
LSM8-202ENST00000411938 SYNE2Q8WXH0 6885 aaKnown RBP3.9□□□□□ -1.78
LSM8-202ENST00000411938 hDV103S1A0JD37 113 aa3.9□□□□□ -1.79
LSM8-202ENST00000411938 H3BPC8 53 aa3.9□□□□□ -1.79
LSM8-202ENST00000411938 M0R2T5 61 aa3.9□□□□□ -1.79
LSM8-202ENST00000411938 DEFB116Q30KQ4 102 aa3.9□□□□□ -1.79
LSM8-202ENST00000411938 FAM229BQ4G0N7 80 aa3.9□□□□□ -1.79
LSM8-202ENST00000411938 CASC2Q6XLA1 102 aa3.9□□□□□ -1.79
LSM8-202ENST00000411938 LINC00472Q9H8W2 130 aa3.9□□□□□ -1.79
LSM8-202ENST00000411938 SSPOA2VEC9 5147 aa3.9□□□□□ -1.79
LSM8-202ENST00000411938 TRAV22A0A0B4J277 110 aa3.89□□□□□ -1.79
LSM8-202ENST00000411938 KRTAP19-2Q3LHN2 52 aa3.89□□□□□ -1.79
LSM8-202ENST00000411938 LINC00483Q53H64 154 aa3.89□□□□□ -1.79
LSM8-202ENST00000411938 ZNF706Q9Y5V0 76 aaPredicted RBP3.89□□□□□ -1.79
LSM8-202ENST00000411938 MMP24-AS1A0A0U1RRL7 71 aa3.88□□□□□ -1.79
LSM8-202ENST00000411938 H0Y9P7 68 aa3.88□□□□□ -1.79
LSM8-202ENST00000411938 MOBPQ13875 183 aa3.88□□□□□ -1.79
LSM8-202ENST00000411938 SPANXA2-OT1Q8N9U9 137 aa3.87□□□□□ -1.79
LSM8-202ENST00000411938 PRO0628Q9UI54 55 aa3.87□□□□□ -1.79
LSM8-202ENST00000411938 FCGBPQ9Y6R7 5405 aaPredicted RBP3.87□□□□□ -1.79
LSM8-202ENST00000411938 USH2AO75445 5202 aa3.86□□□□□ -1.79
LSM8-202ENST00000411938 SPAG11AQ6PDA7 123 aa3.86□□□□□ -1.79
LSM8-202ENST00000411938 C1orf64Q8NEQ6 169 aa3.86□□□□□ -1.79
LSM8-202ENST00000411938 LINC00208Q96KT6 92 aa3.86□□□□□ -1.79
LSM8-202ENST00000411938 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
LSM8-202ENST00000411938 IGLV9-49A0A0B4J1Y8 123 aa3.85□□□□□ -1.79
LSM8-202ENST00000411938 C4orf48Q5BLP8 95 aa3.85□□□□□ -1.79
LSM8-202ENST00000411938 MPLKIPQ8TAP9 179 aa3.85□□□□□ -1.79
LSM8-202ENST00000411938 Q96NJ1 140 aa3.85□□□□□ -1.79
LSM8-202ENST00000411938 Q1T7F1 81 aa3.83□□□□□ -1.8
LSM8-202ENST00000411938 C8orf17Q9NRJ1 99 aa3.83□□□□□ -1.8
LSM8-202ENST00000411938 A0A1B0GVX0 72 aa3.82□□□□□ -1.8
LSM8-202ENST00000411938 XP32Q5T750 250 aa3.82□□□□□ -1.8
LSM8-202ENST00000411938 TP53AIP1Q9HCN2 124 aa3.82□□□□□ -1.8
LSM8-202ENST00000411938 BRK1Q8WUW1 75 aa3.81□□□□□ -1.8
LSM8-202ENST00000411938 V9GYY9 64 aa3.81□□□□□ -1.8
LSM8-202ENST00000411938 PCOTHQ58A44 107 aa3.8□□□□□ -1.8
LSM8-202ENST00000411938 COX6B2Q6YFQ2 88 aa3.8□□□□□ -1.8
LSM8-202ENST00000411938 IGHV6-1A0A0B4J1U7 121 aa3.78□□□□□ -1.8
LSM8-202ENST00000411938 C1orf195Q5TG92 126 aa3.78□□□□□ -1.8
LSM8-202ENST00000411938 MRPL34Q9BQ48 92 aaKnown RBP3.78□□□□□ -1.8
LSM8-202ENST00000411938 SPINK1P00995 79 aa3.77□□□□□ -1.81
LSM8-202ENST00000411938 CD164Q04900 197 aa3.77□□□□□ -1.81
LSM8-202ENST00000411938 NDUFS5O43920 106 aa3.76□□□□□ -1.81
LSM8-202ENST00000411938 COA5Q86WW8 74 aa3.76□□□□□ -1.81
LSM8-202ENST00000411938 C8orf87E5RJ46 101 aa3.75□□□□□ -1.81
LSM8-202ENST00000411938 KRTAP19-1Q8IUB9 90 aa3.75□□□□□ -1.81
LSM8-202ENST00000411938 LIMD2Q9BT23 127 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms