RNA–Protein interactions for RNA: ENST00000411788.5

SEMA3C-202, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-202ENST00000411788 DMDP11532 3685 aa2□□□□□ -2.09
SEMA3C-202ENST00000411788 MAP1AP78559 2803 aaPredicted RBP2□□□□□ -2.09
SEMA3C-202ENST00000411788 VPS13DQ5THJ4 4388 aa2□□□□□ -2.09
SEMA3C-202ENST00000411788 NCOR1O75376 2440 aa2□□□□□ -2.09
SEMA3C-202ENST00000411788 DSPP15924 2871 aaKnown RBP2□□□□□ -2.09
SEMA3C-202ENST00000411788 C2CD3Q4AC94 2353 aa1.99□□□□□ -2.09
SEMA3C-202ENST00000411788 AKAP13Q12802 2813 aa1.99□□□□□ -2.09
SEMA3C-202ENST00000411788 OTOGLQ3ZCN5 2332 aa1.99□□□□□ -2.09
SEMA3C-202ENST00000411788 CSPG4Q6UVK1 2322 aa1.99□□□□□ -2.09
SEMA3C-202ENST00000411788 FREM2Q5SZK8 3169 aa1.98□□□□□ -2.09
SEMA3C-202ENST00000411788 CDH23Q9H251 3354 aa1.98□□□□□ -2.09
SEMA3C-202ENST00000411788 FAM208BQ5VWN6 2430 aa1.98□□□□□ -2.09
SEMA3C-202ENST00000411788 WDFY3Q8IZQ1 3526 aa1.98□□□□□ -2.09
SEMA3C-202ENST00000411788 NBPF19A0A087WUL8 3843 aa1.97□□□□□ -2.09
SEMA3C-202ENST00000411788 CEP290O15078 2479 aa1.97□□□□□ -2.09
SEMA3C-202ENST00000411788 ITPR1Q14643 2758 aa1.97□□□□□ -2.09
SEMA3C-202ENST00000411788 ZFHX4Q86UP3 3567 aa1.97□□□□□ -2.09
SEMA3C-202ENST00000411788 GVINP1Q7Z2Y8 2422 aa1.96□□□□□ -2.1
SEMA3C-202ENST00000411788 RPS29P62273 56 aaKnown RBP1.96□□□□□ -2.1
SEMA3C-202ENST00000411788 KRTAP13-2Q52LG2 175 aa1.96□□□□□ -2.1
SEMA3C-202ENST00000411788 LCE1CQ5T751 118 aa1.96□□□□□ -2.1
SEMA3C-202ENST00000411788 LCE1BQ5T7P3 118 aa1.96□□□□□ -2.1
SEMA3C-202ENST00000411788 TACC2O95359 2948 aa1.95□□□□□ -2.1
SEMA3C-202ENST00000411788 NCOR2Q9Y618 2525 aa1.95□□□□□ -2.1
SEMA3C-202ENST00000411788 DMXL2Q8TDJ6 3036 aa1.94□□□□□ -2.1
SEMA3C-202ENST00000411788 KRTAP10-1P60331 282 aa1.94□□□□□ -2.1
SEMA3C-202ENST00000411788 DMXL1Q9Y485 3027 aa1.94□□□□□ -2.1
SEMA3C-202ENST00000411788 NBASA2RRP1 2371 aa1.94□□□□□ -2.1
SEMA3C-202ENST00000411788 COL12A1Q99715 3063 aa1.94□□□□□ -2.1
SEMA3C-202ENST00000411788 CREBBPQ92793 2442 aa1.93□□□□□ -2.1
SEMA3C-202ENST00000411788 ABCA2Q9BZC7 2435 aa1.93□□□□□ -2.1
SEMA3C-202ENST00000411788 UBR5O95071 2799 aaPredicted RBP1.93□□□□□ -2.1
SEMA3C-202ENST00000411788 ZNF462Q96JM2 2506 aa1.93□□□□□ -2.1
SEMA3C-202ENST00000411788 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
SEMA3C-202ENST00000411788 SPG11Q96JI7 2443 aa1.92□□□□□ -2.1
SEMA3C-202ENST00000411788 F8P00451 2351 aa1.92□□□□□ -2.1
SEMA3C-202ENST00000411788 CELSR3Q9NYQ7 3312 aa1.92□□□□□ -2.1
SEMA3C-202ENST00000411788 MYO15AQ9UKN7 3530 aa1.92□□□□□ -2.1
SEMA3C-202ENST00000411788 SPENQ96T58 3664 aaKnown RBP1.92□□□□□ -2.1
SEMA3C-202ENST00000411788 CELSR1Q9NYQ6 3014 aa1.91□□□□□ -2.1
SEMA3C-202ENST00000411788 ADGRG4Q8IZF6 3080 aa1.91□□□□□ -2.1
SEMA3C-202ENST00000411788 SPTAN1Q13813 2472 aaKnown RBP1.91□□□□□ -2.1
SEMA3C-202ENST00000411788 CRYBG3Q68DQ2 2970 aa1.91□□□□□ -2.1
SEMA3C-202ENST00000411788 FBN1P35555 2871 aaKnown RBP1.91□□□□□ -2.1
SEMA3C-202ENST00000411788 LRBAP50851 2863 aa1.91□□□□□ -2.1
SEMA3C-202ENST00000411788 CSMD1Q96PZ7 3565 aa1.9□□□□□ -2.11
SEMA3C-202ENST00000411788 CCDC168Q8NDH2 2452 aa1.9□□□□□ -2.11
SEMA3C-202ENST00000411788 VWFP04275 2813 aa1.9□□□□□ -2.11
SEMA3C-202ENST00000411788 COL6A5A8TX70 2615 aa1.89□□□□□ -2.11
SEMA3C-202ENST00000411788 MUC6Q6W4X9 2439 aa1.89□□□□□ -2.11
SEMA3C-202ENST00000411788 ANKRD11Q6UB99 2663 aaPredicted RBP1.89□□□□□ -2.11
SEMA3C-202ENST00000411788 BAHCC1Q9P281 2608 aa1.88□□□□□ -2.11
SEMA3C-202ENST00000411788 FRAS1Q86XX4 4008 aa1.88□□□□□ -2.11
SEMA3C-202ENST00000411788 HRNRQ86YZ3 2850 aaPredicted RBP1.88□□□□□ -2.11
SEMA3C-202ENST00000411788 ATMQ13315 3056 aa1.87□□□□□ -2.11
SEMA3C-202ENST00000411788 DNAH1Q9P2D7 4330 aa1.87□□□□□ -2.11
SEMA3C-202ENST00000411788 DNAH11Q96DT5 4516 aa1.87□□□□□ -2.11
SEMA3C-202ENST00000411788 LOC400499M0QZD8 3231 aa1.86□□□□□ -2.11
SEMA3C-202ENST00000411788 TNP1P09430 55 aa1.86□□□□□ -2.11
SEMA3C-202ENST00000411788 SMG1Q96Q15 3661 aaKnown RBP1.86□□□□□ -2.11
SEMA3C-202ENST00000411788 TLN1Q9Y490 2541 aaKnown RBP1.86□□□□□ -2.11
SEMA3C-202ENST00000411788 DCHS2Q6V1P9 2916 aa1.86□□□□□ -2.11
SEMA3C-202ENST00000411788 HIVEP3Q5T1R4 2406 aa1.85□□□□□ -2.11
SEMA3C-202ENST00000411788 NAV2Q8IVL1 2488 aa1.85□□□□□ -2.11
SEMA3C-202ENST00000411788 EYSQ5T1H1 3165 aa1.85□□□□□ -2.11
SEMA3C-202ENST00000411788 LAMA5O15230 3695 aa1.85□□□□□ -2.11
SEMA3C-202ENST00000411788 MEGF8Q7Z7M0 2845 aa1.84□□□□□ -2.12
SEMA3C-202ENST00000411788 MYCBP2O75592 4640 aa1.84□□□□□ -2.12
SEMA3C-202ENST00000411788 JMJD1CQ15652 2540 aa1.83□□□□□ -2.12
SEMA3C-202ENST00000411788 SRRM2Q9UQ35 2752 aaKnown RBP1.83□□□□□ -2.12
SEMA3C-202ENST00000411788 NF1P21359 2839 aa1.83□□□□□ -2.12
SEMA3C-202ENST00000411788 PTPN13Q12923 2485 aa1.82□□□□□ -2.12
SEMA3C-202ENST00000411788 TLN2Q9Y4G6 2542 aa1.82□□□□□ -2.12
SEMA3C-202ENST00000411788 CEP295Q9C0D2 2601 aa1.82□□□□□ -2.12
SEMA3C-202ENST00000411788 BSNQ9UPA5 3926 aa1.81□□□□□ -2.12
SEMA3C-202ENST00000411788 BDP1A6H8Y1 2624 aa1.81□□□□□ -2.12
SEMA3C-202ENST00000411788 MYO9AB2RTY4 2548 aa1.81□□□□□ -2.12
SEMA3C-202ENST00000411788 RELNP78509 3460 aa1.81□□□□□ -2.12
SEMA3C-202ENST00000411788 ZNF292O60281 2723 aa1.8□□□□□ -2.12
SEMA3C-202ENST00000411788 KRTAP10-10P60014 251 aa1.8□□□□□ -2.12
SEMA3C-202ENST00000411788 ASPMQ8IZT6 3477 aa1.8□□□□□ -2.12
SEMA3C-202ENST00000411788 UTP20O75691 2785 aaKnown RBP1.8□□□□□ -2.12
SEMA3C-202ENST00000411788 SONP18583 2426 aaKnown RBP1.79□□□□□ -2.12
SEMA3C-202ENST00000411788 APCP25054 2843 aa1.79□□□□□ -2.12
SEMA3C-202ENST00000411788 C9orf92A6NGG3 77 aa1.79□□□□□ -2.12
SEMA3C-202ENST00000411788 TRRAPQ9Y4A5 3859 aa1.79□□□□□ -2.12
SEMA3C-202ENST00000411788 DOPEY1Q5JWR5 2465 aa1.79□□□□□ -2.12
SEMA3C-202ENST00000411788 RIF1Q5UIP0 2472 aaKnown RBP1.79□□□□□ -2.12
SEMA3C-202ENST00000411788 SETXQ7Z333 2677 aaKnown RBP1.79□□□□□ -2.12
SEMA3C-202ENST00000411788 DNAH8Q96JB1 4490 aa1.77□□□□□ -2.13
SEMA3C-202ENST00000411788 SMR3AQ99954 134 aa1.77□□□□□ -2.13
SEMA3C-202ENST00000411788 TEX15Q9BXT5 2789 aa1.77□□□□□ -2.13
SEMA3C-202ENST00000411788 MXRA5Q9NR99 2828 aa1.76□□□□□ -2.13
SEMA3C-202ENST00000411788 ANK2Q01484 3957 aa1.76□□□□□ -2.13
SEMA3C-202ENST00000411788 GCN1Q92616 2671 aaKnown RBP1.76□□□□□ -2.13
SEMA3C-202ENST00000411788 NIPBLQ6KC79 2804 aaeCLIP1.76□□□□□ -2.13
SEMA3C-202ENST00000411788 CENPEQ02224 2701 aa1.75□□□□□ -2.13
SEMA3C-202ENST00000411788 ANK3Q12955 4377 aaKnown RBP1.75□□□□□ -2.13
SEMA3C-202ENST00000411788 PKD1L2Q7Z442 2459 aa1.75□□□□□ -2.13
SEMA3C-202ENST00000411788 DYNC2H1Q8NCM8 4307 aaKnown RBP1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms