RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TP53AIP1Q9HCN2 124 aa8.06□□□□□ -1.12
LIMS1-205ENST00000410093 ZCCHC13Q8WW36 166 aaKnown RBP8.05□□□□□ -1.12
LIMS1-205ENST00000410093 LRP1BQ9NZR2 4599 aa8.05□□□□□ -1.12
LIMS1-205ENST00000410093 MMP24-AS1A0A0U1RRL7 71 aa8.04□□□□□ -1.12
LIMS1-205ENST00000410093 hDV103S1A0JD37 113 aa8.03□□□□□ -1.12
LIMS1-205ENST00000410093 A0A1B0GVX0 72 aa8.03□□□□□ -1.12
LIMS1-205ENST00000410093 Q5XG85 94 aa8.03□□□□□ -1.12
LIMS1-205ENST00000410093 RYR1P21817 5038 aa8.02□□□□□ -1.13
LIMS1-205ENST00000410093 HRCT1Q6UXD1 115 aa8.02□□□□□ -1.13
LIMS1-205ENST00000410093 HSPG2P98160 4391 aa8.01□□□□□ -1.13
LIMS1-205ENST00000410093 KRTAP17-1Q9BYP8 105 aa8.01□□□□□ -1.13
LIMS1-205ENST00000410093 C8orf17Q9NRJ1 99 aa8.01□□□□□ -1.13
LIMS1-205ENST00000410093 ANAPC11Q9NYG5 84 aa8.01□□□□□ -1.13
LIMS1-205ENST00000410093 DNAH5Q8TE73 4624 aa8.01□□□□□ -1.13
LIMS1-205ENST00000410093 Q8N1X5 172 aa8□□□□□ -1.13
LIMS1-205ENST00000410093 PCLOQ9Y6V0 5065 aa7.98□□□□□ -1.13
LIMS1-205ENST00000410093 C8orf87E5RJ46 101 aa7.97□□□□□ -1.13
LIMS1-205ENST00000410093 H0Y9P7 68 aa7.97□□□□□ -1.13
LIMS1-205ENST00000410093 TRAV22A0A0B4J277 110 aa7.96□□□□□ -1.14
LIMS1-205ENST00000410093 APOBP04114 4563 aaKnown RBP7.96□□□□□ -1.14
LIMS1-205ENST00000410093 LIMD2Q9BT23 127 aa7.96□□□□□ -1.14
LIMS1-205ENST00000410093 KRTAP4-5Q9BYR2 181 aa7.95□□□□□ -1.14
LIMS1-205ENST00000410093 IGHV6-1A0A0B4J1U7 121 aa7.94□□□□□ -1.14
LIMS1-205ENST00000410093 MRPL34Q9BQ48 92 aaKnown RBP7.94□□□□□ -1.14
LIMS1-205ENST00000410093 SPINK6Q6UWN8 80 aa7.93□□□□□ -1.14
LIMS1-205ENST00000410093 SPANXA2-OT1Q8N9U9 137 aa7.93□□□□□ -1.14
LIMS1-205ENST00000410093 SMIM26A0A096LP01 95 aa7.93□□□□□ -1.14
LIMS1-205ENST00000410093 LINC00208Q96KT6 92 aa7.93□□□□□ -1.14
LIMS1-205ENST00000410093 FAM229AH3BQW9 127 aa7.92□□□□□ -1.14
LIMS1-205ENST00000410093 CYP4F30PQ9H0H9 118 aa7.92□□□□□ -1.14
LIMS1-205ENST00000410093 KRTAP1-4P0C5Y4 121 aa7.91□□□□□ -1.14
LIMS1-205ENST00000410093 A0A087X002 238 aa7.9□□□□□ -1.14
LIMS1-205ENST00000410093 KRTAP13-2Q52LG2 175 aa7.9□□□□□ -1.14
LIMS1-205ENST00000410093 C1orf64Q8NEQ6 169 aa7.9□□□□□ -1.14
LIMS1-205ENST00000410093 KRTAP4-8Q9BYQ9 185 aa7.9□□□□□ -1.14
LIMS1-205ENST00000410093 OXTP01178 125 aa7.89□□□□□ -1.15
LIMS1-205ENST00000410093 SMR3BP02814 79 aaPredicted RBP7.89□□□□□ -1.15
LIMS1-205ENST00000410093 C4orf48Q5BLP8 95 aa7.89□□□□□ -1.15
LIMS1-205ENST00000410093 Q5VSD8 79 aa7.89□□□□□ -1.15
LIMS1-205ENST00000410093 ABCA13Q86UQ4 5058 aa7.88□□□□□ -1.15
LIMS1-205ENST00000410093 SPINK1P00995 79 aa7.88□□□□□ -1.15
LIMS1-205ENST00000410093 RPS29P62273 56 aaKnown RBP7.88□□□□□ -1.15
LIMS1-205ENST00000410093 PLA2G1BP04054 148 aaKnown RBP7.87□□□□□ -1.15
LIMS1-205ENST00000410093 SPAG11AQ6PDA7 123 aa7.86□□□□□ -1.15
LIMS1-205ENST00000410093 NDUFS5O43920 106 aa7.85□□□□□ -1.15
LIMS1-205ENST00000410093 TYMSOSQ8TAI1 123 aa7.85□□□□□ -1.15
LIMS1-205ENST00000410093 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.83□□□□□ -1.16
LIMS1-205ENST00000410093 C1orf195Q5TG92 126 aa7.83□□□□□ -1.16
LIMS1-205ENST00000410093 LINC00313P59037 77 aa7.83□□□□□ -1.16
LIMS1-205ENST00000410093 LOC101927531A0A1B0GV80 90 aa7.81□□□□□ -1.16
LIMS1-205ENST00000410093 XP32Q5T750 250 aa7.81□□□□□ -1.16
LIMS1-205ENST00000410093 FAT1Q14517 4588 aa7.79□□□□□ -1.16
LIMS1-205ENST00000410093 IGLV7-46A0A075B6I9 117 aa7.78□□□□□ -1.16
LIMS1-205ENST00000410093 KRTAP9-6A0A140TA67 174 aa7.78□□□□□ -1.16
LIMS1-205ENST00000410093 KRTAP9-2Q9BYQ4 174 aa7.78□□□□□ -1.16
LIMS1-205ENST00000410093 NOTCH2NLQ7Z3S9 236 aa7.78□□□□□ -1.16
LIMS1-205ENST00000410093 Q8N9P0 234 aaPredicted RBP7.78□□□□□ -1.16
LIMS1-205ENST00000410093 VPS13BQ7Z7G8 4022 aa7.77□□□□□ -1.17
LIMS1-205ENST00000410093 LINC00304Q8N9R0 145 aa7.76□□□□□ -1.17
LIMS1-205ENST00000410093 FP248Q71RG6 208 aaPredicted RBP7.74□□□□□ -1.17
LIMS1-205ENST00000410093 KRTAP13-3Q3SY46 172 aa7.73□□□□□ -1.17
LIMS1-205ENST00000410093 V9GYY9 64 aa7.72□□□□□ -1.17
LIMS1-205ENST00000410093 J3QL48 77 aa7.71□□□□□ -1.18
LIMS1-205ENST00000410093 C4orf26Q17RF5 130 aa7.69□□□□□ -1.18
LIMS1-205ENST00000410093 Q1T7F1 81 aa7.69□□□□□ -1.18
LIMS1-205ENST00000410093 PRR26Q8N8Z3 221 aa7.69□□□□□ -1.18
LIMS1-205ENST00000410093 KRTAP16-1A8MUX0 517 aa7.68□□□□□ -1.18
LIMS1-205ENST00000410093 KRTAP10-4P60372 401 aaPredicted RBP7.68□□□□□ -1.18
LIMS1-205ENST00000410093 FLG2Q5D862 2391 aaPredicted RBP7.68□□□□□ -1.18
LIMS1-205ENST00000410093 PRR4Q16378 134 aa7.67□□□□□ -1.18
LIMS1-205ENST00000410093 PCOTHQ58A44 107 aa7.66□□□□□ -1.18
LIMS1-205ENST00000410093 Q5W150 140 aa7.66□□□□□ -1.18
LIMS1-205ENST00000410093 LCE2CQ5TA81 110 aa7.64□□□□□ -1.19
LIMS1-205ENST00000410093 DMBT1Q9UGM3 2413 aaPredicted RBP7.64□□□□□ -1.19
LIMS1-205ENST00000410093 MYCBP2O75592 4640 aa7.63□□□□□ -1.19
LIMS1-205ENST00000410093 IGKV2-30P06310 120 aa7.61□□□□□ -1.19
LIMS1-205ENST00000410093 COA5Q86WW8 74 aa7.61□□□□□ -1.19
LIMS1-205ENST00000410093 MPLKIPQ8TAP9 179 aa7.6□□□□□ -1.19
LIMS1-205ENST00000410093 HERC1Q15751 4861 aa7.58□□□□□ -1.2
LIMS1-205ENST00000410093 ACYP2P14621 99 aa7.57□□□□□ -1.2
LIMS1-205ENST00000410093 PKHD1L1Q86WI1 4243 aa7.53□□□□□ -1.2
LIMS1-205ENST00000410093 DMAC1Q96GE9 116 aa7.53□□□□□ -1.2
LIMS1-205ENST00000410093 HRES1P13985 223 aa7.52□□□□□ -1.2
LIMS1-205ENST00000410093 LORP23490 312 aaPredicted RBP7.52□□□□□ -1.21
LIMS1-205ENST00000410093 C20orf166-AS1Q96NR2 134 aa7.51□□□□□ -1.21
LIMS1-205ENST00000410093 A8MUU9 505 aa7.5□□□□□ -1.21
LIMS1-205ENST00000410093 LCE3BQ5TA77 95 aa7.49□□□□□ -1.21
LIMS1-205ENST00000410093 C7orf65Q6ZTY9 151 aa7.48□□□□□ -1.21
LIMS1-205ENST00000410093 LRP1Q07954 4544 aaKnown RBP7.47□□□□□ -1.21
LIMS1-205ENST00000410093 PRO0628Q9UI54 55 aa7.47□□□□□ -1.21
LIMS1-205ENST00000410093 FAT3Q8TDW7 4589 aa7.47□□□□□ -1.21
LIMS1-205ENST00000410093 KRTAP10-8P60410 259 aa7.47□□□□□ -1.21
LIMS1-205ENST00000410093 RETNLBQ9BQ08 111 aa7.46□□□□□ -1.22
LIMS1-205ENST00000410093 LINC01558Q9Y6Z2 57 aa7.46□□□□□ -1.22
LIMS1-205ENST00000410093 IGKV2D-30A0A075B6S6 120 aa7.45□□□□□ -1.22
LIMS1-205ENST00000410093 A8MUN3 132 aa7.45□□□□□ -1.22
LIMS1-205ENST00000410093 CHKB-CPT1BH3BT56 60 aa7.42□□□□□ -1.22
LIMS1-205ENST00000410093 PSPHP1O15172 72 aa7.41□□□□□ -1.22
LIMS1-205ENST00000410093 Q75L30 129 aa7.41□□□□□ -1.22
LIMS1-205ENST00000410093 KRTAP9-9Q9BYP9 154 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms