RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 PRKDCP78527 4128 aaKnown RBP6.56□□□□□ -1.36
SNX13-202ENST00000409604 DNAH9Q9NYC9 4486 aa6.55□□□□□ -1.36
SNX13-202ENST00000409604 A6NED7 52 aa6.55□□□□□ -1.36
SNX13-202ENST00000409604 LOC101927531A0A1B0GV80 90 aa6.55□□□□□ -1.36
SNX13-202ENST00000409604 LINC01600Q96MT4 127 aa6.53□□□□□ -1.36
SNX13-202ENST00000409604 ACYP2P14621 99 aa6.51□□□□□ -1.37
SNX13-202ENST00000409604 OCR1Q9BZK8 76 aa6.51□□□□□ -1.37
SNX13-202ENST00000409604 A0A0U1RQV1 116 aa6.5□□□□□ -1.37
SNX13-202ENST00000409604 PLECQ15149 4684 aaKnown RBP6.49□□□□□ -1.37
SNX13-202ENST00000409604 M0R2T5 61 aa6.49□□□□□ -1.37
SNX13-202ENST00000409604 KRTAP1-4P0C5Y4 121 aa6.49□□□□□ -1.37
SNX13-202ENST00000409604 A0A1B0GVY2 172 aa6.48□□□□□ -1.37
SNX13-202ENST00000409604 SPINK7P58062 85 aa6.48□□□□□ -1.37
SNX13-202ENST00000409604 CYSTM1Q9H1C7 97 aa6.47□□□□□ -1.37
SNX13-202ENST00000409604 ATP5EP56381 51 aaPredicted RBP6.46□□□□□ -1.38
SNX13-202ENST00000409604 H7BZZ5 65 aa6.45□□□□□ -1.38
SNX13-202ENST00000409604 COA5Q86WW8 74 aa6.45□□□□□ -1.38
SNX13-202ENST00000409604 ZCCHC13Q8WW36 166 aaKnown RBP6.45□□□□□ -1.38
SNX13-202ENST00000409604 ANK2Q01484 3957 aa6.45□□□□□ -1.38
SNX13-202ENST00000409604 SMIM26A0A096LP01 95 aa6.44□□□□□ -1.38
SNX13-202ENST00000409604 RBM12B-AS1Q9P1G2 102 aa6.44□□□□□ -1.38
SNX13-202ENST00000409604 HRES1P13985 223 aa6.44□□□□□ -1.38
SNX13-202ENST00000409604 LINC01554Q52M75 96 aa6.44□□□□□ -1.38
SNX13-202ENST00000409604 Q5W150 140 aa6.43□□□□□ -1.38
SNX13-202ENST00000409604 H3BPC8 53 aa6.43□□□□□ -1.38
SNX13-202ENST00000409604 A0A1B0GU69 56 aa6.42□□□□□ -1.38
SNX13-202ENST00000409604 KLKP1Q107X0 134 aa6.41□□□□□ -1.38
SNX13-202ENST00000409604 STARD9Q9P2P6 4700 aa6.4□□□□□ -1.39
SNX13-202ENST00000409604 DNAH10Q8IVF4 4471 aa6.37□□□□□ -1.39
SNX13-202ENST00000409604 CYP4F30PQ9H0H9 118 aa6.37□□□□□ -1.39
SNX13-202ENST00000409604 A8MUN3 132 aa6.35□□□□□ -1.39
SNX13-202ENST00000409604 SEC61BP60468 96 aaKnown RBP6.34□□□□□ -1.39
SNX13-202ENST00000409604 V9GYY9 64 aa6.34□□□□□ -1.4
SNX13-202ENST00000409604 DNAH11Q96DT5 4516 aa6.33□□□□□ -1.4
SNX13-202ENST00000409604 OXTP01178 125 aa6.33□□□□□ -1.4
SNX13-202ENST00000409604 A0A0D9SG42 100 aa6.32□□□□□ -1.4
SNX13-202ENST00000409604 KRTAP29-1A8MX34 341 aaPredicted RBP6.32□□□□□ -1.4
SNX13-202ENST00000409604 K7ERS5 55 aa6.32□□□□□ -1.4
SNX13-202ENST00000409604 KRTAP4-5Q9BYR2 181 aa6.31□□□□□ -1.4
SNX13-202ENST00000409604 SVIPQ8NHG7 77 aa6.3□□□□□ -1.4
SNX13-202ENST00000409604 FP248Q71RG6 208 aaPredicted RBP6.29□□□□□ -1.4
SNX13-202ENST00000409604 DNAH5Q8TE73 4624 aa6.28□□□□□ -1.4
SNX13-202ENST00000409604 FAT1Q14517 4588 aa6.28□□□□□ -1.4
SNX13-202ENST00000409604 LYSTQ99698 3801 aa6.27□□□□□ -1.41
SNX13-202ENST00000409604 KMT2AQ03164 3969 aa6.26□□□□□ -1.41
SNX13-202ENST00000409604 KIAA1109Q2LD37 5005 aa6.25□□□□□ -1.41
SNX13-202ENST00000409604 DNAH1Q9P2D7 4330 aa6.22□□□□□ -1.41
SNX13-202ENST00000409604 ASB16-AS1Q495Z4 193 aa6.2□□□□□ -1.42
SNX13-202ENST00000409604 PMAIP1Q13794 54 aa6.19□□□□□ -1.42
SNX13-202ENST00000409604 SPINT4Q6UDR6 99 aa6.19□□□□□ -1.42
SNX13-202ENST00000409604 XP32Q5T750 250 aa6.18□□□□□ -1.42
SNX13-202ENST00000409604 S4R3F8 94 aa6.18□□□□□ -1.42
SNX13-202ENST00000409604 KRTAP10-8P60410 259 aa6.17□□□□□ -1.42
SNX13-202ENST00000409604 CSAG1Q6PB30 78 aa6.17□□□□□ -1.42
SNX13-202ENST00000409604 SPANXA2-OT1Q8N9U9 137 aa6.16□□□□□ -1.42
SNX13-202ENST00000409604 RPS29P62273 56 aaKnown RBP6.16□□□□□ -1.42
SNX13-202ENST00000409604 Q5XG85 94 aa6.16□□□□□ -1.42
SNX13-202ENST00000409604 HYDINQ4G0P3 5121 aa6.16□□□□□ -1.42
SNX13-202ENST00000409604 RYR1P21817 5038 aa6.16□□□□□ -1.42
SNX13-202ENST00000409604 RPL37P61927 97 aaKnown RBP6.15□□□□□ -1.42
SNX13-202ENST00000409604 Q75L30 129 aa6.12□□□□□ -1.43
SNX13-202ENST00000409604 RPS28P62857 69 aaKnown RBP6.12□□□□□ -1.43
SNX13-202ENST00000409604 CMYA5Q8N3K9 4069 aa6.12□□□□□ -1.43
SNX13-202ENST00000409604 DYNC1H1Q14204 4646 aaKnown RBP6.11□□□□□ -1.43
SNX13-202ENST00000409604 RYR3Q15413 4870 aa6.11□□□□□ -1.43
SNX13-202ENST00000409604 UQCR11O14957 56 aa6.1□□□□□ -1.43
SNX13-202ENST00000409604 KMT2CQ8NEZ4 4911 aaKnown RBP6.1□□□□□ -1.43
SNX13-202ENST00000409604 VPS13DQ5THJ4 4388 aa6.09□□□□□ -1.43
SNX13-202ENST00000409604 LRP1BQ9NZR2 4599 aa6.08□□□□□ -1.44
SNX13-202ENST00000409604 MIR22HGQ0VDD5 57 aa6.07□□□□□ -1.44
SNX13-202ENST00000409604 A8MUU9 505 aa6.07□□□□□ -1.44
SNX13-202ENST00000409604 KRTAP13-3Q3SY46 172 aa6.06□□□□□ -1.44
SNX13-202ENST00000409604 DNAH7Q8WXX0 4024 aa6.05□□□□□ -1.44
SNX13-202ENST00000409604 C20orf166-AS1Q96NR2 134 aa6.05□□□□□ -1.44
SNX13-202ENST00000409604 R4GN34 69 aa6.04□□□□□ -1.44
SNX13-202ENST00000409604 A0A1B0GU33 70 aa6.03□□□□□ -1.44
SNX13-202ENST00000409604 DMAC1Q96GE9 116 aa6.03□□□□□ -1.44
SNX13-202ENST00000409604 DNAH8Q96JB1 4490 aa6.01□□□□□ -1.45
SNX13-202ENST00000409604 ADM2Q7Z4H4 148 aa6.01□□□□□ -1.45
SNX13-202ENST00000409604 KRTAP16-1A8MUX0 517 aa6.01□□□□□ -1.45
SNX13-202ENST00000409604 MT1HL1P0DM35 61 aa6.01□□□□□ -1.45
SNX13-202ENST00000409604 SPATA8Q6RVD6 105 aa6□□□□□ -1.45
SNX13-202ENST00000409604 MYCBP2O75592 4640 aa6□□□□□ -1.45
SNX13-202ENST00000409604 KRTAP10-4P60372 401 aaPredicted RBP6□□□□□ -1.45
SNX13-202ENST00000409604 CAMK2N1Q7Z7J9 78 aa5.99□□□□□ -1.45
SNX13-202ENST00000409604 TPRXLQ17RH7 258 aa5.99□□□□□ -1.45
SNX13-202ENST00000409604 H1FX-AS1Q4G0G2 97 aa5.98□□□□□ -1.45
SNX13-202ENST00000409604 FAT3Q8TDW7 4589 aa5.98□□□□□ -1.45
SNX13-202ENST00000409604 M0QZ58 72 aa5.98□□□□□ -1.45
SNX13-202ENST00000409604 SACSQ9NZJ4 4579 aa5.96□□□□□ -1.46
SNX13-202ENST00000409604 DNAH3Q8TD57 4116 aa5.95□□□□□ -1.46
SNX13-202ENST00000409604 VPS13BQ7Z7G8 4022 aa5.93□□□□□ -1.46
SNX13-202ENST00000409604 DNAH2Q9P225 4427 aa5.93□□□□□ -1.46
SNX13-202ENST00000409604 DNAH6Q9C0G6 4158 aa5.93□□□□□ -1.46
SNX13-202ENST00000409604 LRP1Q07954 4544 aaKnown RBP5.91□□□□□ -1.46
SNX13-202ENST00000409604 CRIPTQ9P021 101 aa5.91□□□□□ -1.46
SNX13-202ENST00000409604 PKHD1P08F94 4074 aa5.91□□□□□ -1.46
SNX13-202ENST00000409604 LCA10Q71F78 164 aa5.91□□□□□ -1.46
SNX13-202ENST00000409604 DNAH17Q9UFH2 4485 aa5.9□□□□□ -1.46
SNX13-202ENST00000409604 ALMS1Q8TCU4 4167 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms