RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 TRACP01848 142 aa7.67□□□□□ -1.18
CHMP3-203ENST00000409225 KRTAP5-9P26371 169 aa7.67□□□□□ -1.18
CHMP3-203ENST00000409225 A0A1B0GX51 115 aa7.65□□□□□ -1.18
CHMP3-203ENST00000409225 CCKP06307 115 aa7.65□□□□□ -1.18
CHMP3-203ENST00000409225 H1FX-AS1Q4G0G2 97 aa7.64□□□□□ -1.19
CHMP3-203ENST00000409225 LYRM7Q5U5X0 104 aa7.64□□□□□ -1.19
CHMP3-203ENST00000409225 KRTAP2-3P0C7H8 128 aa7.62□□□□□ -1.19
CHMP3-203ENST00000409225 KRTAP2-4Q9BYR9 128 aa7.62□□□□□ -1.19
CHMP3-203ENST00000409225 MT1BP07438 61 aa7.61□□□□□ -1.19
CHMP3-203ENST00000409225 A0A0B4J2C4 111 aa7.59□□□□□ -1.19
CHMP3-203ENST00000409225 Q5VV11 94 aa7.58□□□□□ -1.2
CHMP3-203ENST00000409225 VPS25Q9BRG1 176 aa7.58□□□□□ -1.2
CHMP3-203ENST00000409225 S100A6P06703 90 aa7.57□□□□□ -1.2
CHMP3-203ENST00000409225 ORMDL1Q9P0S3 153 aa7.57□□□□□ -1.2
CHMP3-203ENST00000409225 KRTAP10-5P60370 271 aa7.56□□□□□ -1.2
CHMP3-203ENST00000409225 IGKV3D-7A0A0C4DH55 119 aa7.54□□□□□ -1.2
CHMP3-203ENST00000409225 J3KT08 172 aa7.54□□□□□ -1.2
CHMP3-203ENST00000409225 DNAL4O96015 105 aa7.54□□□□□ -1.2
CHMP3-203ENST00000409225 DSCR8Q96T75 97 aa7.54□□□□□ -1.2
CHMP3-203ENST00000409225 TRIAP1O43715 76 aa7.53□□□□□ -1.2
CHMP3-203ENST00000409225 COX8AP10176 69 aa7.53□□□□□ -1.2
CHMP3-203ENST00000409225 FAM236AA0A1B0GUQ0 79 aa7.51□□□□□ -1.21
CHMP3-203ENST00000409225 FAM236BA0A1B0GV22 79 aa7.51□□□□□ -1.21
CHMP3-203ENST00000409225 H3BQ85 93 aa7.51□□□□□ -1.21
CHMP3-203ENST00000409225 TMEM256-PLSCR3K7ERE1 68 aa7.51□□□□□ -1.21
CHMP3-203ENST00000409225 NDUFB1O75438 58 aa7.51□□□□□ -1.21
CHMP3-203ENST00000409225 HIST3H2BBQ8N257 126 aa7.51□□□□□ -1.21
CHMP3-203ENST00000409225 C8orf17Q9NRJ1 99 aa7.51□□□□□ -1.21
CHMP3-203ENST00000409225 HIST1H2BLQ99880 126 aa7.5□□□□□ -1.21
CHMP3-203ENST00000409225 PRO1854Q9UHT4 67 aa7.5□□□□□ -1.21
CHMP3-203ENST00000409225 S100A2P29034 98 aa7.49□□□□□ -1.21
CHMP3-203ENST00000409225 KRTAP19-8Q3LI54 63 aa7.48□□□□□ -1.21
CHMP3-203ENST00000409225 DLEU1O43261 78 aa7.47□□□□□ -1.21
CHMP3-203ENST00000409225 Q6ZVQ6 151 aa7.45□□□□□ -1.22
CHMP3-203ENST00000409225 UBE2V1Q13404 147 aa7.44□□□□□ -1.22
CHMP3-203ENST00000409225 LOC105371267A0A1B0GV96 52 aa7.43□□□□□ -1.22
CHMP3-203ENST00000409225 C14orf144Q96I85 54 aa7.43□□□□□ -1.22
CHMP3-203ENST00000409225 SPRR2GQ9BYE4 73 aa7.43□□□□□ -1.22
CHMP3-203ENST00000409225 HIGD1BQ9P298 99 aa7.43□□□□□ -1.22
CHMP3-203ENST00000409225 RBM3P98179 157 aaKnown RBP7.42□□□□□ -1.22
CHMP3-203ENST00000409225 C5orf47Q569G3 176 aa7.41□□□□□ -1.22
CHMP3-203ENST00000409225 Q6ZQT0 140 aa7.41□□□□□ -1.22
CHMP3-203ENST00000409225 CEND1Q8N111 149 aa7.41□□□□□ -1.22
CHMP3-203ENST00000409225 PSMB2P49721 201 aa7.4□□□□□ -1.22
CHMP3-203ENST00000409225 IGKV2D-30A0A075B6S6 120 aa7.39□□□□□ -1.23
CHMP3-203ENST00000409225 IGKV2-30P06310 120 aa7.39□□□□□ -1.23
CHMP3-203ENST00000409225 SPRR2EP22531 72 aa7.39□□□□□ -1.23
CHMP3-203ENST00000409225 SPRR2BP35325 72 aa7.39□□□□□ -1.23
CHMP3-203ENST00000409225 SPRR2AP35326 72 aa7.39□□□□□ -1.23
CHMP3-203ENST00000409225 C2orf91Q6ZV80 131 aa7.39□□□□□ -1.23
CHMP3-203ENST00000409225 FXYD2P54710 66 aa7.38□□□□□ -1.23
CHMP3-203ENST00000409225 KRTAP4-8Q9BYQ9 185 aa7.37□□□□□ -1.23
CHMP3-203ENST00000409225 SPRR2FQ96RM1 72 aa7.36□□□□□ -1.23
CHMP3-203ENST00000409225 IMUPQ9GZP8 106 aa7.36□□□□□ -1.23
CHMP3-203ENST00000409225 C9JAW5 83 aa7.34□□□□□ -1.23
CHMP3-203ENST00000409225 MRPL34Q9BQ48 92 aaKnown RBP7.34□□□□□ -1.23
CHMP3-203ENST00000409225 NDUFS5O43920 106 aa7.33□□□□□ -1.24
CHMP3-203ENST00000409225 COX6CP09669 75 aa7.33□□□□□ -1.24
CHMP3-203ENST00000409225 PYY3Q5JQD4 70 aa7.33□□□□□ -1.24
CHMP3-203ENST00000409225 TMEM254Q8TBM7 123 aa7.33□□□□□ -1.24
CHMP3-203ENST00000409225 KRTAP2-2Q9BYT5 123 aa7.33□□□□□ -1.24
CHMP3-203ENST00000409225 KRTAP2-1Q9BYU5 128 aa7.33□□□□□ -1.24
CHMP3-203ENST00000409225 C7orf65Q6ZTY9 151 aa7.32□□□□□ -1.24
CHMP3-203ENST00000409225 PRR15Q8IV56 129 aa7.32□□□□□ -1.24
CHMP3-203ENST00000409225 PAM16Q9Y3D7 125 aa7.32□□□□□ -1.24
CHMP3-203ENST00000409225 MMP24-AS1A0A0U1RRL7 71 aa7.31□□□□□ -1.24
CHMP3-203ENST00000409225 K7ERJ3 54 aa7.31□□□□□ -1.24
CHMP3-203ENST00000409225 C4orf26Q17RF5 130 aa7.31□□□□□ -1.24
CHMP3-203ENST00000409225 SPATA45Q537H7 98 aa7.31□□□□□ -1.24
CHMP3-203ENST00000409225 SMIM6P0DI80 62 aa7.27□□□□□ -1.25
CHMP3-203ENST00000409225 hDV103S1A0JD37 113 aa7.25□□□□□ -1.25
CHMP3-203ENST00000409225 C9orf118A6NHY6 69 aa7.25□□□□□ -1.25
CHMP3-203ENST00000409225 Q5W150 140 aa7.25□□□□□ -1.25
CHMP3-203ENST00000409225 S4R3F8 94 aa7.25□□□□□ -1.25
CHMP3-203ENST00000409225 KLKP1Q107X0 134 aa7.24□□□□□ -1.25
CHMP3-203ENST00000409225 CSAG1Q6PB30 78 aa7.24□□□□□ -1.25
CHMP3-203ENST00000409225 VAMP8Q9BV40 100 aa7.24□□□□□ -1.25
CHMP3-203ENST00000409225 BAALC-AS2P0C853 105 aa7.23□□□□□ -1.25
CHMP3-203ENST00000409225 KRTAP4-12Q9BQ66 201 aa7.23□□□□□ -1.25
CHMP3-203ENST00000409225 KRTAP19-4Q3LI73 84 aa7.21□□□□□ -1.26
CHMP3-203ENST00000409225 SCGB1C2P0DMR2 95 aa7.2□□□□□ -1.26
CHMP3-203ENST00000409225 A0A1B0GW54 56 aa7.19□□□□□ -1.26
CHMP3-203ENST00000409225 LCE1AQ5T7P2 110 aa7.19□□□□□ -1.26
CHMP3-203ENST00000409225 LCA10Q71F78 164 aa7.18□□□□□ -1.26
CHMP3-203ENST00000409225 KRTAP3-1Q9BYR8 98 aa7.18□□□□□ -1.26
CHMP3-203ENST00000409225 K7EQZ3 153 aa7.17□□□□□ -1.26
CHMP3-203ENST00000409225 NREPQ16612 68 aa7.17□□□□□ -1.26
CHMP3-203ENST00000409225 SPRR2DP22532 72 aa7.16□□□□□ -1.26
CHMP3-203ENST00000409225 HSD52Q0P140 79 aa7.16□□□□□ -1.26
CHMP3-203ENST00000409225 LOC110117498A0A087WWA1 95 aa7.15□□□□□ -1.26
CHMP3-203ENST00000409225 KRTAP8-1Q8IUC2 63 aa7.13□□□□□ -1.27
CHMP3-203ENST00000409225 JMJD7-PLA2G4BH0Y9G9 81 aa7.12□□□□□ -1.27
CHMP3-203ENST00000409225 GPR98Q8WXG9 6306 aa7.12□□□□□ -1.27
CHMP3-203ENST00000409225 TSTD3H0UI37 97 aa7.1□□□□□ -1.27
CHMP3-203ENST00000409225 C14orf132Q9NPU4 83 aa7.1□□□□□ -1.27
CHMP3-203ENST00000409225 UQCR10Q9UDW1 63 aa7.1□□□□□ -1.27
CHMP3-203ENST00000409225 PDE6GP18545 87 aa7.09□□□□□ -1.27
CHMP3-203ENST00000409225 C1orf64Q8NEQ6 169 aa7.09□□□□□ -1.27
CHMP3-203ENST00000409225 HCG22E2RYF7 251 aa7.08□□□□□ -1.28
CHMP3-203ENST00000409225 LCE3BQ5TA77 95 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms