RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 A0A1B0GVX0 72 aa6.61□□□□□ -1.35
SNORD88B-201ENST00000408454 ATXN8Q156A1 80 aa6.61□□□□□ -1.35
SNORD88B-201ENST00000408454 BAALC-AS2P0C853 105 aa6.59□□□□□ -1.35
SNORD88B-201ENST00000408454 KRTAP16-1A8MUX0 517 aa6.54□□□□□ -1.36
SNORD88B-201ENST00000408454 DEFB116Q30KQ4 102 aa6.54□□□□□ -1.36
SNORD88B-201ENST00000408454 Q6ZQT0 140 aa6.54□□□□□ -1.36
SNORD88B-201ENST00000408454 TMA7Q9Y2S6 64 aaKnown RBP6.54□□□□□ -1.36
SNORD88B-201ENST00000408454 LOC110117498A0A087WWA1 95 aa6.52□□□□□ -1.37
SNORD88B-201ENST00000408454 ZCCHC13Q8WW36 166 aaKnown RBP6.52□□□□□ -1.37
SNORD88B-201ENST00000408454 A8MWP4 228 aa6.5□□□□□ -1.37
SNORD88B-201ENST00000408454 TSTD3H0UI37 97 aa6.49□□□□□ -1.37
SNORD88B-201ENST00000408454 SMIM6P0DI80 62 aa6.48□□□□□ -1.37
SNORD88B-201ENST00000408454 NREPQ16612 68 aa6.48□□□□□ -1.37
SNORD88B-201ENST00000408454 Q8N9P0 234 aaPredicted RBP6.46□□□□□ -1.38
SNORD88B-201ENST00000408454 LINC00846Q9NV44 126 aa6.46□□□□□ -1.38
SNORD88B-201ENST00000408454 HRES1P13985 223 aa6.45□□□□□ -1.38
SNORD88B-201ENST00000408454 SPINK7P58062 85 aa6.45□□□□□ -1.38
SNORD88B-201ENST00000408454 MPLKIPQ8TAP9 179 aa6.45□□□□□ -1.38
SNORD88B-201ENST00000408454 C8orf17Q9NRJ1 99 aa6.45□□□□□ -1.38
SNORD88B-201ENST00000408454 NOTCH2NLQ7Z3S9 236 aa6.44□□□□□ -1.38
SNORD88B-201ENST00000408454 Q6ZVQ6 151 aa6.43□□□□□ -1.38
SNORD88B-201ENST00000408454 FSIP2Q5CZC0 6907 aa6.43□□□□□ -1.38
SNORD88B-201ENST00000408454 H3BT86 120 aa6.41□□□□□ -1.38
SNORD88B-201ENST00000408454 WFDC13Q8IUB5 93 aa6.41□□□□□ -1.38
SNORD88B-201ENST00000408454 PRR15Q8IV56 129 aa6.41□□□□□ -1.38
SNORD88B-201ENST00000408454 C14orf132Q9NPU4 83 aa6.41□□□□□ -1.38
SNORD88B-201ENST00000408454 TMEM254Q8TBM7 123 aa6.4□□□□□ -1.38
SNORD88B-201ENST00000408454 MRPL34Q9BQ48 92 aaKnown RBP6.39□□□□□ -1.39
SNORD88B-201ENST00000408454 KRTAP9-8Q9BYQ0 159 aa6.39□□□□□ -1.39
SNORD88B-201ENST00000408454 FLGP20930 4061 aaPredicted RBP6.39□□□□□ -1.39
SNORD88B-201ENST00000408454 IGKV3D-7A0A0C4DH55 119 aa6.38□□□□□ -1.39
SNORD88B-201ENST00000408454 NDUFS5O43920 106 aa6.37□□□□□ -1.39
SNORD88B-201ENST00000408454 KRTAP10-10P60014 251 aa6.37□□□□□ -1.39
SNORD88B-201ENST00000408454 hDV103S1A0JD37 113 aa6.36□□□□□ -1.39
SNORD88B-201ENST00000408454 BPY2O14599 106 aa6.35□□□□□ -1.39
SNORD88B-201ENST00000408454 BATFQ16520 125 aa6.35□□□□□ -1.39
SNORD88B-201ENST00000408454 NAA38Q9BRA0 125 aaKnown RBP6.34□□□□□ -1.39
SNORD88B-201ENST00000408454 C9orf118A6NHY6 69 aa6.32□□□□□ -1.4
SNORD88B-201ENST00000408454 MT2AP02795 61 aa6.31□□□□□ -1.4
SNORD88B-201ENST00000408454 C7orf65Q6ZTY9 151 aa6.31□□□□□ -1.4
SNORD88B-201ENST00000408454 MMP24-AS1A0A0U1RRL7 71 aa6.29□□□□□ -1.4
SNORD88B-201ENST00000408454 A0A1W2PPM0 123 aa6.29□□□□□ -1.4
SNORD88B-201ENST00000408454 H1FX-AS1Q4G0G2 97 aa6.28□□□□□ -1.4
SNORD88B-201ENST00000408454 CXCL6P80162 114 aa6.27□□□□□ -1.41
SNORD88B-201ENST00000408454 UBL5Q9BZL1 73 aa6.27□□□□□ -1.41
SNORD88B-201ENST00000408454 K7EQZ3 153 aa6.26□□□□□ -1.41
SNORD88B-201ENST00000408454 CASC2Q6XLA1 102 aa6.25□□□□□ -1.41
SNORD88B-201ENST00000408454 IGKV2D-30A0A075B6S6 120 aa6.23□□□□□ -1.41
SNORD88B-201ENST00000408454 MT1FP04733 61 aa6.23□□□□□ -1.41
SNORD88B-201ENST00000408454 IGKV2-30P06310 120 aa6.23□□□□□ -1.41
SNORD88B-201ENST00000408454 SPCS1Q9Y6A9 102 aa6.23□□□□□ -1.41
SNORD88B-201ENST00000408454 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.19□□□□□ -1.42
SNORD88B-201ENST00000408454 HCG22E2RYF7 251 aa6.19□□□□□ -1.42
SNORD88B-201ENST00000408454 TAX1BP3O14907 124 aa6.19□□□□□ -1.42
SNORD88B-201ENST00000408454 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
SNORD88B-201ENST00000408454 COL5A1-AS1Q5SY13 56 aa6.18□□□□□ -1.42
SNORD88B-201ENST00000408454 KRTAP9-7A8MTY7 169 aa6.17□□□□□ -1.42
SNORD88B-201ENST00000408454 TP53AIP1Q9HCN2 124 aa6.17□□□□□ -1.42
SNORD88B-201ENST00000408454 GTF2H5Q6ZYL4 71 aa6.14□□□□□ -1.43
SNORD88B-201ENST00000408454 LCE2BO14633 110 aa6.12□□□□□ -1.43
SNORD88B-201ENST00000408454 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
SNORD88B-201ENST00000408454 Q5W150 140 aa6.1□□□□□ -1.43
SNORD88B-201ENST00000408454 Q8N9L7 120 aa6.09□□□□□ -1.43
SNORD88B-201ENST00000408454 K7EP34 96 aa6.08□□□□□ -1.44
SNORD88B-201ENST00000408454 FAM236AA0A1B0GUQ0 79 aa6.07□□□□□ -1.44
SNORD88B-201ENST00000408454 FAM236BA0A1B0GV22 79 aa6.07□□□□□ -1.44
SNORD88B-201ENST00000408454 C4orf26Q17RF5 130 aa6.07□□□□□ -1.44
SNORD88B-201ENST00000408454 CSAG1Q6PB30 78 aa6.07□□□□□ -1.44
SNORD88B-201ENST00000408454 F8W1H4 67 aa6.06□□□□□ -1.44
SNORD88B-201ENST00000408454 KRTAP19-6Q3LI70 58 aa6.06□□□□□ -1.44
SNORD88B-201ENST00000408454 LOC105371267A0A1B0GV96 52 aa6.05□□□□□ -1.44
SNORD88B-201ENST00000408454 S4R3F8 94 aa6.05□□□□□ -1.44
SNORD88B-201ENST00000408454 ACYP1P07311 99 aa6.02□□□□□ -1.45
SNORD88B-201ENST00000408454 C1orf64Q8NEQ6 169 aa6.02□□□□□ -1.45
SNORD88B-201ENST00000408454 USH2AO75445 5202 aa6.01□□□□□ -1.45
SNORD88B-201ENST00000408454 SMCPP49901 116 aaPredicted RBP6.01□□□□□ -1.45
SNORD88B-201ENST00000408454 C5orf47Q569G3 176 aa5.99□□□□□ -1.45
SNORD88B-201ENST00000408454 PRO0461Q9UI25 63 aa5.99□□□□□ -1.45
SNORD88B-201ENST00000408454 ATP5EP2Q5VTU8 51 aa5.98□□□□□ -1.45
SNORD88B-201ENST00000408454 LOC101927531A0A1B0GV80 90 aa5.97□□□□□ -1.45
SNORD88B-201ENST00000408454 TRAV22A0A0B4J277 110 aa5.96□□□□□ -1.46
SNORD88B-201ENST00000408454 ATOX1O00244 68 aa5.96□□□□□ -1.46
SNORD88B-201ENST00000408454 SSPOA2VEC9 5147 aa5.94□□□□□ -1.46
SNORD88B-201ENST00000408454 ETDBQ3ZM63 59 aa5.93□□□□□ -1.46
SNORD88B-201ENST00000408454 CRIPTQ9P021 101 aa5.93□□□□□ -1.46
SNORD88B-201ENST00000408454 FCGBPQ9Y6R7 5405 aaPredicted RBP5.92□□□□□ -1.46
SNORD88B-201ENST00000408454 Q5VV11 94 aa5.92□□□□□ -1.46
SNORD88B-201ENST00000408454 FAM240AA0A1B0GVK7 77 aa5.91□□□□□ -1.46
SNORD88B-201ENST00000408454 UQCRQO14949 82 aa5.89□□□□□ -1.47
SNORD88B-201ENST00000408454 LCA10Q71F78 164 aa5.89□□□□□ -1.47
SNORD88B-201ENST00000408454 IMUPQ9GZP8 106 aa5.89□□□□□ -1.47
SNORD88B-201ENST00000408454 CYP4F30PQ9H0H9 118 aa5.89□□□□□ -1.47
SNORD88B-201ENST00000408454 A8MUN3 132 aa5.87□□□□□ -1.47
SNORD88B-201ENST00000408454 KLKP1Q107X0 134 aa5.87□□□□□ -1.47
SNORD88B-201ENST00000408454 A6NN06 94 aa5.86□□□□□ -1.47
SNORD88B-201ENST00000408454 NDUFC1O43677 76 aa5.86□□□□□ -1.47
SNORD88B-201ENST00000408454 HIST1H4AP62805 103 aaKnown RBP5.86□□□□□ -1.47
SNORD88B-201ENST00000408454 KRTAP6-3Q3LI67 103 aa5.84□□□□□ -1.47
SNORD88B-201ENST00000408454 SPRR2GQ9BYE4 73 aa5.84□□□□□ -1.47
SNORD88B-201ENST00000408454 KRTAP3-1Q9BYR8 98 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms