RNA–Protein interactions for RNA: ENST00000407540.7

MATN3-201, Transcript of matrilin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MATN3, Length 2,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3-201ENST00000407540 LINC00483Q53H64 154 aa10.29□□□□□ -0.76
MATN3-201ENST00000407540 DNAH11Q96DT5 4516 aa10.28□□□□□ -0.76
MATN3-201ENST00000407540 A6NED7 52 aa10.28□□□□□ -0.76
MATN3-201ENST00000407540 Q75L30 129 aa10.27□□□□□ -0.77
MATN3-201ENST00000407540 ALMS1Q8TCU4 4167 aa10.26□□□□□ -0.77
MATN3-201ENST00000407540 IGHV6-1A0A0B4J1U7 121 aa10.26□□□□□ -0.77
MATN3-201ENST00000407540 PLAC8Q9NZF1 115 aa10.26□□□□□ -0.77
MATN3-201ENST00000407540 A0A087X002 238 aa10.25□□□□□ -0.77
MATN3-201ENST00000407540 NOTCH2NLQ7Z3S9 236 aa10.25□□□□□ -0.77
MATN3-201ENST00000407540 DNAH5Q8TE73 4624 aa10.25□□□□□ -0.77
MATN3-201ENST00000407540 ZNF861PO60384 105 aa10.25□□□□□ -0.77
MATN3-201ENST00000407540 C4orf48Q5BLP8 95 aa10.24□□□□□ -0.77
MATN3-201ENST00000407540 SPANXA2-OT1Q8N9U9 137 aa10.23□□□□□ -0.77
MATN3-201ENST00000407540 LOC101927531A0A1B0GV80 90 aa10.22□□□□□ -0.77
MATN3-201ENST00000407540 LY6G6CO95867 125 aa10.22□□□□□ -0.77
MATN3-201ENST00000407540 C7orf65Q6ZTY9 151 aa10.22□□□□□ -0.77
MATN3-201ENST00000407540 C8orf17Q9NRJ1 99 aa10.21□□□□□ -0.77
MATN3-201ENST00000407540 C1orf134Q5TEV5 83 aa10.21□□□□□ -0.78
MATN3-201ENST00000407540 CDC42SE1Q9NRR8 79 aa10.2□□□□□ -0.78
MATN3-201ENST00000407540 PCOTHQ58A44 107 aa10.2□□□□□ -0.78
MATN3-201ENST00000407540 ZNF706Q9Y5V0 76 aaPredicted RBP10.2□□□□□ -0.78
MATN3-201ENST00000407540 SPINK6Q6UWN8 80 aa10.19□□□□□ -0.78
MATN3-201ENST00000407540 ASB16-AS1Q495Z4 193 aa10.16□□□□□ -0.78
MATN3-201ENST00000407540 A0A1B0GVX0 72 aa10.16□□□□□ -0.78
MATN3-201ENST00000407540 C8orf87E5RJ46 101 aa10.16□□□□□ -0.78
MATN3-201ENST00000407540 KRTAP10-2P60368 255 aa10.16□□□□□ -0.78
MATN3-201ENST00000407540 LRP1BQ9NZR2 4599 aa10.16□□□□□ -0.78
MATN3-201ENST00000407540 HYDINQ4G0P3 5121 aa10.15□□□□□ -0.78
MATN3-201ENST00000407540 H3BPC8 53 aa10.15□□□□□ -0.78
MATN3-201ENST00000407540 COA5Q86WW8 74 aa10.15□□□□□ -0.78
MATN3-201ENST00000407540 CIRBP-AS1Q8TBR5 109 aa10.15□□□□□ -0.78
MATN3-201ENST00000407540 IGLV7-43P04211 117 aa10.14□□□□□ -0.79
MATN3-201ENST00000407540 CDK2AP2O75956 126 aa10.12□□□□□ -0.79
MATN3-201ENST00000407540 MRPL34Q9BQ48 92 aaKnown RBP10.08□□□□□ -0.8
MATN3-201ENST00000407540 SPINK7P58062 85 aa10.06□□□□□ -0.8
MATN3-201ENST00000407540 SPAG11AQ6PDA7 123 aa10.06□□□□□ -0.8
MATN3-201ENST00000407540 TP53AIP1Q9HCN2 124 aa10.06□□□□□ -0.8
MATN3-201ENST00000407540 PKD1P98161 4303 aa10.04□□□□□ -0.8
MATN3-201ENST00000407540 FAT2Q9NYQ8 4349 aa10.04□□□□□ -0.8
MATN3-201ENST00000407540 IGLV7-46A0A075B6I9 117 aa10.04□□□□□ -0.8
MATN3-201ENST00000407540 Q5W150 140 aa10.04□□□□□ -0.8
MATN3-201ENST00000407540 LINC01558Q9Y6Z2 57 aa10.04□□□□□ -0.8
MATN3-201ENST00000407540 PRAC1Q96KF2 57 aa10.01□□□□□ -0.81
MATN3-201ENST00000407540 VPS13BQ7Z7G8 4022 aa10□□□□□ -0.81
MATN3-201ENST00000407540 LINC00313P59037 77 aa9.99□□□□□ -0.81
MATN3-201ENST00000407540 KRTAP10-1P60331 282 aa9.99□□□□□ -0.81
MATN3-201ENST00000407540 H3BS24 57 aa9.97□□□□□ -0.81
MATN3-201ENST00000407540 KRTAP13-2Q52LG2 175 aa9.97□□□□□ -0.81
MATN3-201ENST00000407540 RETNLBQ9BQ08 111 aa9.96□□□□□ -0.82
MATN3-201ENST00000407540 ADM2Q7Z4H4 148 aa9.94□□□□□ -0.82
MATN3-201ENST00000407540 SSBP3-AS1Q7Z2R9 100 aa9.92□□□□□ -0.82
MATN3-201ENST00000407540 PKHD1P08F94 4074 aa9.91□□□□□ -0.82
MATN3-201ENST00000407540 HRES1P13985 223 aa9.91□□□□□ -0.82
MATN3-201ENST00000407540 KRTAP13-3Q3SY46 172 aa9.91□□□□□ -0.82
MATN3-201ENST00000407540 Q6ZSA8 131 aa9.87□□□□□ -0.83
MATN3-201ENST00000407540 LINC01554Q52M75 96 aa9.86□□□□□ -0.83
MATN3-201ENST00000407540 KRTAP1-4P0C5Y4 121 aa9.83□□□□□ -0.84
MATN3-201ENST00000407540 PRR26Q8N8Z3 221 aa9.82□□□□□ -0.84
MATN3-201ENST00000407540 PLA2G1BP04054 148 aaKnown RBP9.8□□□□□ -0.84
MATN3-201ENST00000407540 SACSQ9NZJ4 4579 aa9.76□□□□□ -0.85
MATN3-201ENST00000407540 KRTAP16-1A8MUX0 517 aa9.74□□□□□ -0.85
MATN3-201ENST00000407540 FAT1Q14517 4588 aa9.71□□□□□ -0.86
MATN3-201ENST00000407540 FAM229AH3BQW9 127 aa9.7□□□□□ -0.86
MATN3-201ENST00000407540 TYMSOSQ8TAI1 123 aa9.68□□□□□ -0.86
MATN3-201ENST00000407540 DYNC1H1Q14204 4646 aaKnown RBP9.67□□□□□ -0.86
MATN3-201ENST00000407540 SMR3BP02814 79 aaPredicted RBP9.66□□□□□ -0.86
MATN3-201ENST00000407540 IGKV2-30P06310 120 aa9.66□□□□□ -0.86
MATN3-201ENST00000407540 IGKV2D-30A0A075B6S6 120 aa9.66□□□□□ -0.86
MATN3-201ENST00000407540 ACYP2P14621 99 aa9.65□□□□□ -0.86
MATN3-201ENST00000407540 DMAC1Q96GE9 116 aa9.63□□□□□ -0.87
MATN3-201ENST00000407540 CSAG1Q6PB30 78 aa9.58□□□□□ -0.88
MATN3-201ENST00000407540 SPATA8Q6RVD6 105 aa9.57□□□□□ -0.88
MATN3-201ENST00000407540 SPINK1P00995 79 aa9.56□□□□□ -0.88
MATN3-201ENST00000407540 APOBP04114 4563 aaKnown RBP9.53□□□□□ -0.88
MATN3-201ENST00000407540 LINC00304Q8N9R0 145 aa9.52□□□□□ -0.88
MATN3-201ENST00000407540 A0A1B0GU69 56 aa9.51□□□□□ -0.89
MATN3-201ENST00000407540 C9orf92A6NGG3 77 aa9.48□□□□□ -0.89
MATN3-201ENST00000407540 MIR22HGQ0VDD5 57 aa9.48□□□□□ -0.89
MATN3-201ENST00000407540 Q8N1X5 172 aa9.47□□□□□ -0.89
MATN3-201ENST00000407540 KMT2CQ8NEZ4 4911 aaKnown RBP9.45□□□□□ -0.9
MATN3-201ENST00000407540 PKHD1L1Q86WI1 4243 aa9.42□□□□□ -0.9
MATN3-201ENST00000407540 UQCR11O14957 56 aa9.42□□□□□ -0.9
MATN3-201ENST00000407540 KRTAP21-3Q3LHN1 58 aa9.41□□□□□ -0.9
MATN3-201ENST00000407540 KRTAP10-4P60372 401 aaPredicted RBP9.39□□□□□ -0.91
MATN3-201ENST00000407540 A0A1B0GVY2 172 aa9.38□□□□□ -0.91
MATN3-201ENST00000407540 RYR2Q92736 4967 aa9.37□□□□□ -0.91
MATN3-201ENST00000407540 LRP1Q07954 4544 aaKnown RBP9.35□□□□□ -0.91
MATN3-201ENST00000407540 RPS29P62273 56 aaKnown RBP9.32□□□□□ -0.92
MATN3-201ENST00000407540 A8MUU9 505 aa9.25□□□□□ -0.93
MATN3-201ENST00000407540 C20orf166-AS1Q96NR2 134 aa9.25□□□□□ -0.93
MATN3-201ENST00000407540 FLG2Q5D862 2391 aaPredicted RBP9.24□□□□□ -0.93
MATN3-201ENST00000407540 ROMO1P60602 79 aa9.24□□□□□ -0.93
MATN3-201ENST00000407540 KRTAP3-1Q9BYR8 98 aa9.24□□□□□ -0.93
MATN3-201ENST00000407540 MYCBP2O75592 4640 aa9.21□□□□□ -0.94
MATN3-201ENST00000407540 FAT3Q8TDW7 4589 aa9.2□□□□□ -0.94
MATN3-201ENST00000407540 KRTAP25-1Q3LHN0 102 aa9.19□□□□□ -0.94
MATN3-201ENST00000407540 TNXBP22105 4242 aa9.18□□□□□ -0.94
MATN3-201ENST00000407540 HSPG2P98160 4391 aa9.16□□□□□ -0.94
MATN3-201ENST00000407540 DMBT1Q9UGM3 2413 aaPredicted RBP9.12□□□□□ -0.95
MATN3-201ENST00000407540 RYR3Q15413 4870 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms