RNA–Protein interactions for RNA: ENST00000405943.3

HDGFP1-201, Transcript of heparin binding growth factor pseudogene 1, humanhuman

BASIC

Gene HDGFP1, Length 252 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP1-201ENST00000405943 KRTAP16-1A8MUX0 517 aa2.57□□□□□ -2
HDGFP1-201ENST00000405943 TEP1Q99973 2627 aaKnown RBP2.57□□□□□ -2
HDGFP1-201ENST00000405943 VPS13CQ709C8 3753 aa2.56□□□□□ -2
HDGFP1-201ENST00000405943 A8MUU9 505 aa2.56□□□□□ -2
HDGFP1-201ENST00000405943 SPINK1P00995 79 aa2.56□□□□□ -2
HDGFP1-201ENST00000405943 KRTAP25-1Q3LHN0 102 aa2.56□□□□□ -2
HDGFP1-201ENST00000405943 C1orf134Q5TEV5 83 aa2.56□□□□□ -2
HDGFP1-201ENST00000405943 NF1P21359 2839 aa2.56□□□□□ -2
HDGFP1-201ENST00000405943 NOTCH2Q04721 2471 aa2.56□□□□□ -2
HDGFP1-201ENST00000405943 A0A1B0GU33 70 aa2.55□□□□□ -2
HDGFP1-201ENST00000405943 ACANP16112 2415 aa2.55□□□□□ -2
HDGFP1-201ENST00000405943 ROMO1P60602 79 aa2.53□□□□□ -2
HDGFP1-201ENST00000405943 RPS29P62273 56 aaKnown RBP2.53□□□□□ -2
HDGFP1-201ENST00000405943 H1FX-AS1Q4G0G2 97 aa2.53□□□□□ -2
HDGFP1-201ENST00000405943 ITPR2Q14571 2701 aa2.53□□□□□ -2
HDGFP1-201ENST00000405943 H0YAA0 97 aa2.52□□□□□ -2.01
HDGFP1-201ENST00000405943 Q6ZSA8 131 aa2.52□□□□□ -2.01
HDGFP1-201ENST00000405943 Q8N1X5 172 aa2.52□□□□□ -2.01
HDGFP1-201ENST00000405943 LINC00304Q8N9R0 145 aa2.52□□□□□ -2.01
HDGFP1-201ENST00000405943 KRTAP13-2Q52LG2 175 aa2.51□□□□□ -2.01
HDGFP1-201ENST00000405943 TYMSOSQ8TAI1 123 aa2.51□□□□□ -2.01
HDGFP1-201ENST00000405943 VWFP04275 2813 aa2.51□□□□□ -2.01
HDGFP1-201ENST00000405943 AKAP9Q99996 3911 aa2.5□□□□□ -2.01
HDGFP1-201ENST00000405943 OTOGQ6ZRI0 2925 aa2.5□□□□□ -2.01
HDGFP1-201ENST00000405943 ANK3Q12955 4377 aaKnown RBP2.5□□□□□ -2.01
HDGFP1-201ENST00000405943 FBN3Q75N90 2809 aa2.5□□□□□ -2.01
HDGFP1-201ENST00000405943 NSD1Q96L73 2696 aaPredicted RBP2.49□□□□□ -2.01
HDGFP1-201ENST00000405943 ATRQ13535 2644 aa2.49□□□□□ -2.01
HDGFP1-201ENST00000405943 TENM1Q9UKZ4 2725 aa2.48□□□□□ -2.01
HDGFP1-201ENST00000405943 F8P00451 2351 aa2.47□□□□□ -2.01
HDGFP1-201ENST00000405943 TENM3Q9P273 2699 aa2.47□□□□□ -2.01
HDGFP1-201ENST00000405943 KRTAP1-4P0C5Y4 121 aa2.47□□□□□ -2.01
HDGFP1-201ENST00000405943 CUBNO60494 3623 aa2.47□□□□□ -2.01
HDGFP1-201ENST00000405943 COX6B2Q6YFQ2 88 aa2.46□□□□□ -2.02
HDGFP1-201ENST00000405943 C20orf166-AS1Q96NR2 134 aa2.46□□□□□ -2.02
HDGFP1-201ENST00000405943 TENM2Q9NT68 2774 aa2.45□□□□□ -2.02
HDGFP1-201ENST00000405943 RPL37P61927 97 aaKnown RBP2.45□□□□□ -2.02
HDGFP1-201ENST00000405943 KRTAP10-2P60368 255 aa2.44□□□□□ -2.02
HDGFP1-201ENST00000405943 SPINT4Q6UDR6 99 aa2.44□□□□□ -2.02
HDGFP1-201ENST00000405943 ZNF469Q96JG9 3925 aaPredicted RBP2.44□□□□□ -2.02
HDGFP1-201ENST00000405943 DNAH1Q9P2D7 4330 aa2.43□□□□□ -2.02
HDGFP1-201ENST00000405943 KRTAP10-1P60331 282 aa2.42□□□□□ -2.02
HDGFP1-201ENST00000405943 PKD1L1Q8TDX9 2849 aa2.42□□□□□ -2.02
HDGFP1-201ENST00000405943 KRTAP3-1Q9BYR8 98 aa2.41□□□□□ -2.02
HDGFP1-201ENST00000405943 CRIPTQ9P021 101 aa2.41□□□□□ -2.02
HDGFP1-201ENST00000405943 SRRM2Q9UQ35 2752 aaKnown RBP2.4□□□□□ -2.02
HDGFP1-201ENST00000405943 C9orf92A6NGG3 77 aa2.4□□□□□ -2.03
HDGFP1-201ENST00000405943 P0C880 135 aa2.39□□□□□ -2.03
HDGFP1-201ENST00000405943 DNHD1Q96M86 4753 aa2.38□□□□□ -2.03
HDGFP1-201ENST00000405943 NBEAL1Q6ZS30 2694 aa2.37□□□□□ -2.03
HDGFP1-201ENST00000405943 KRTAP21-3Q3LHN1 58 aa2.37□□□□□ -2.03
HDGFP1-201ENST00000405943 A0A0D9SG42 100 aa2.36□□□□□ -2.03
HDGFP1-201ENST00000405943 S4R3F8 94 aa2.36□□□□□ -2.03
HDGFP1-201ENST00000405943 ALMS1Q8TCU4 4167 aa2.36□□□□□ -2.03
HDGFP1-201ENST00000405943 FBN1P35555 2871 aaKnown RBP2.35□□□□□ -2.03
HDGFP1-201ENST00000405943 STAB2Q8WWQ8 2551 aa2.35□□□□□ -2.03
HDGFP1-201ENST00000405943 NOTCH1P46531 2555 aa2.34□□□□□ -2.03
HDGFP1-201ENST00000405943 NDUFAF8A1L188 74 aa2.34□□□□□ -2.03
HDGFP1-201ENST00000405943 KRTAP10-6P60371 365 aaPredicted RBP2.34□□□□□ -2.03
HDGFP1-201ENST00000405943 TPRXLQ17RH7 258 aa2.34□□□□□ -2.03
HDGFP1-201ENST00000405943 KRTAP15-1Q3LI76 137 aa2.34□□□□□ -2.03
HDGFP1-201ENST00000405943 STAB1Q9NY15 2570 aa2.34□□□□□ -2.04
HDGFP1-201ENST00000405943 MEGF8Q7Z7M0 2845 aa2.33□□□□□ -2.04
HDGFP1-201ENST00000405943 HUWE1Q7Z6Z7 4374 aaKnown RBP2.33□□□□□ -2.04
HDGFP1-201ENST00000405943 M0QZ58 72 aa2.32□□□□□ -2.04
HDGFP1-201ENST00000405943 TRRAPQ9Y4A5 3859 aa2.32□□□□□ -2.04
HDGFP1-201ENST00000405943 COL6A5A8TX70 2615 aa2.32□□□□□ -2.04
HDGFP1-201ENST00000405943 KRTAP3-3Q9BYR6 98 aa2.31□□□□□ -2.04
HDGFP1-201ENST00000405943 KRTAP3-2Q9BYR7 98 aa2.31□□□□□ -2.04
HDGFP1-201ENST00000405943 KRTAP13-4Q3LI77 160 aa2.3□□□□□ -2.04
HDGFP1-201ENST00000405943 C10orf95Q9H7T3 257 aa2.29□□□□□ -2.04
HDGFP1-201ENST00000405943 TGP01266 2768 aa2.29□□□□□ -2.04
HDGFP1-201ENST00000405943 MGAM2Q2M2H8 2515 aa2.29□□□□□ -2.04
HDGFP1-201ENST00000405943 DNAH3Q8TD57 4116 aa2.28□□□□□ -2.04
HDGFP1-201ENST00000405943 SMR3BP02814 79 aaPredicted RBP2.28□□□□□ -2.04
HDGFP1-201ENST00000405943 KRTAP12-2P59991 146 aa2.28□□□□□ -2.04
HDGFP1-201ENST00000405943 XP32Q5T750 250 aa2.28□□□□□ -2.04
HDGFP1-201ENST00000405943 KRTAP12-1P59990 96 aa2.27□□□□□ -2.05
HDGFP1-201ENST00000405943 DNAH10Q8IVF4 4471 aa2.27□□□□□ -2.05
HDGFP1-201ENST00000405943 ANK2Q01484 3957 aa2.26□□□□□ -2.05
HDGFP1-201ENST00000405943 DNAH8Q96JB1 4490 aa2.26□□□□□ -2.05
HDGFP1-201ENST00000405943 DNAH9Q9NYC9 4486 aa2.25□□□□□ -2.05
HDGFP1-201ENST00000405943 DYNC2H1Q8NCM8 4307 aaKnown RBP2.25□□□□□ -2.05
HDGFP1-201ENST00000405943 COL7A1Q02388 2944 aa2.24□□□□□ -2.05
HDGFP1-201ENST00000405943 KRTAP10-4P60372 401 aaPredicted RBP2.24□□□□□ -2.05
HDGFP1-201ENST00000405943 KRTAP10-8P60410 259 aa2.22□□□□□ -2.05
HDGFP1-201ENST00000405943 LUZP6Q538Z0 58 aa2.22□□□□□ -2.05
HDGFP1-201ENST00000405943 PP632Q6XCG6 107 aa2.22□□□□□ -2.05
HDGFP1-201ENST00000405943 A0A0A0MQY5 61 aa2.21□□□□□ -2.06
HDGFP1-201ENST00000405943 A0A1B0GVY2 172 aa2.21□□□□□ -2.06
HDGFP1-201ENST00000405943 PLAC4Q8WY50 150 aa2.21□□□□□ -2.06
HDGFP1-201ENST00000405943 LYSTQ99698 3801 aa2.21□□□□□ -2.06
HDGFP1-201ENST00000405943 VPS13DQ5THJ4 4388 aa2.21□□□□□ -2.06
HDGFP1-201ENST00000405943 DNAH17Q9UFH2 4485 aa2.21□□□□□ -2.06
HDGFP1-201ENST00000405943 R4GN34 69 aa2.2□□□□□ -2.06
HDGFP1-201ENST00000405943 CSMD3Q7Z407 3707 aa2.19□□□□□ -2.06
HDGFP1-201ENST00000405943 FLG2Q5D862 2391 aaPredicted RBP2.18□□□□□ -2.06
HDGFP1-201ENST00000405943 CMYA5Q8N3K9 4069 aa2.17□□□□□ -2.06
HDGFP1-201ENST00000405943 Q5VSD8 79 aa2.16□□□□□ -2.06
HDGFP1-201ENST00000405943 PLECQ15149 4684 aaKnown RBP2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms