RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 KRTAP16-1A8MUX0 517 aa9.43□□□□□ -0.9
PTPRN2-204ENST00000404321 K7ERU9 68 aa9.43□□□□□ -0.9
PTPRN2-204ENST00000404321 LYRM7Q5U5X0 104 aa9.43□□□□□ -0.9
PTPRN2-204ENST00000404321 JMJD7-PLA2G4BH0Y9G9 81 aa9.41□□□□□ -0.9
PTPRN2-204ENST00000404321 Q6ZQT0 140 aa9.4□□□□□ -0.9
PTPRN2-204ENST00000404321 TRBV20-1A0A075B6N2 111 aa9.39□□□□□ -0.91
PTPRN2-204ENST00000404321 C14orf132Q9NPU4 83 aa9.39□□□□□ -0.91
PTPRN2-204ENST00000404321 LOC110117498A0A087WWA1 95 aa9.38□□□□□ -0.91
PTPRN2-204ENST00000404321 M0R2T5 61 aa9.38□□□□□ -0.91
PTPRN2-204ENST00000404321 A0A1B0GVX0 72 aa9.37□□□□□ -0.91
PTPRN2-204ENST00000404321 C21orf62-AS1Q17RA5 79 aa9.35□□□□□ -0.91
PTPRN2-204ENST00000404321 MTURNQ8N3F0 131 aa9.35□□□□□ -0.91
PTPRN2-204ENST00000404321 F8W1H4 67 aa9.34□□□□□ -0.91
PTPRN2-204ENST00000404321 J3KT08 172 aa9.34□□□□□ -0.91
PTPRN2-204ENST00000404321 C8orf87E5RJ46 101 aa9.33□□□□□ -0.92
PTPRN2-204ENST00000404321 PDE6GP18545 87 aa9.32□□□□□ -0.92
PTPRN2-204ENST00000404321 KRTAP10-6P60371 365 aaPredicted RBP9.31□□□□□ -0.92
PTPRN2-204ENST00000404321 J3QR89 54 aa9.28□□□□□ -0.92
PTPRN2-204ENST00000404321 NDUFB1O75438 58 aa9.28□□□□□ -0.92
PTPRN2-204ENST00000404321 LORP23490 312 aaPredicted RBP9.28□□□□□ -0.92
PTPRN2-204ENST00000404321 FLGP20930 4061 aaPredicted RBP9.28□□□□□ -0.92
PTPRN2-204ENST00000404321 A0A1B0GW54 56 aa9.26□□□□□ -0.93
PTPRN2-204ENST00000404321 H3BT86 120 aa9.26□□□□□ -0.93
PTPRN2-204ENST00000404321 LCE2DQ5TA82 110 aaPredicted RBP9.26□□□□□ -0.93
PTPRN2-204ENST00000404321 FSIP2Q5CZC0 6907 aa9.26□□□□□ -0.93
PTPRN2-204ENST00000404321 PCP4P48539 62 aa9.25□□□□□ -0.93
PTPRN2-204ENST00000404321 PRO0461Q9UI25 63 aa9.25□□□□□ -0.93
PTPRN2-204ENST00000404321 IGKV3D-7A0A0C4DH55 119 aa9.24□□□□□ -0.93
PTPRN2-204ENST00000404321 A8MWP4 228 aa9.24□□□□□ -0.93
PTPRN2-204ENST00000404321 NREPQ16612 68 aa9.24□□□□□ -0.93
PTPRN2-204ENST00000404321 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
PTPRN2-204ENST00000404321 ZCCHC13Q8WW36 166 aaKnown RBP9.2□□□□□ -0.94
PTPRN2-204ENST00000404321 KRTAP9-6A0A140TA67 174 aa9.19□□□□□ -0.94
PTPRN2-204ENST00000404321 FAM236DA0A1B0GTK5 79 aa9.18□□□□□ -0.94
PTPRN2-204ENST00000404321 FAM236CP0DP71 79 aa9.18□□□□□ -0.94
PTPRN2-204ENST00000404321 ETDBQ3ZM63 59 aa9.18□□□□□ -0.94
PTPRN2-204ENST00000404321 HRES1P13985 223 aa9.17□□□□□ -0.94
PTPRN2-204ENST00000404321 PRR15Q8IV56 129 aa9.17□□□□□ -0.94
PTPRN2-204ENST00000404321 Q8N9P0 234 aaPredicted RBP9.17□□□□□ -0.94
PTPRN2-204ENST00000404321 SMCPP49901 116 aaPredicted RBP9.14□□□□□ -0.95
PTPRN2-204ENST00000404321 Q6ZVQ6 151 aa9.13□□□□□ -0.95
PTPRN2-204ENST00000404321 RBM12B-AS1Q9P1G2 102 aa9.13□□□□□ -0.95
PTPRN2-204ENST00000404321 K7EQZ3 153 aa9.12□□□□□ -0.95
PTPRN2-204ENST00000404321 MPLKIPQ8TAP9 179 aa9.12□□□□□ -0.95
PTPRN2-204ENST00000404321 MMP24-AS1A0A0U1RRL7 71 aa9.11□□□□□ -0.95
PTPRN2-204ENST00000404321 SCGB1A1P11684 91 aa9.11□□□□□ -0.95
PTPRN2-204ENST00000404321 SPINK7P58062 85 aa9.11□□□□□ -0.95
PTPRN2-204ENST00000404321 BPY2O14599 106 aa9.09□□□□□ -0.95
PTPRN2-204ENST00000404321 MRPL34Q9BQ48 92 aaKnown RBP9.06□□□□□ -0.96
PTPRN2-204ENST00000404321 hDV103S1A0JD37 113 aa9.05□□□□□ -0.96
PTPRN2-204ENST00000404321 TMEM254Q8TBM7 123 aa9.05□□□□□ -0.96
PTPRN2-204ENST00000404321 Q8N9L7 120 aa9.04□□□□□ -0.96
PTPRN2-204ENST00000404321 NDUFS5O43920 106 aa9.03□□□□□ -0.96
PTPRN2-204ENST00000404321 CRCT1Q9UGL9 99 aa9.02□□□□□ -0.97
PTPRN2-204ENST00000404321 KRTAP9-8Q9BYQ0 159 aa9□□□□□ -0.97
PTPRN2-204ENST00000404321 WFDC13Q8IUB5 93 aa8.99□□□□□ -0.97
PTPRN2-204ENST00000404321 LINC00846Q9NV44 126 aa8.98□□□□□ -0.97
PTPRN2-204ENST00000404321 CASC2Q6XLA1 102 aa8.94□□□□□ -0.98
PTPRN2-204ENST00000404321 UBL5Q9BZL1 73 aa8.94□□□□□ -0.98
PTPRN2-204ENST00000404321 MT2AP02795 61 aa8.91□□□□□ -0.98
PTPRN2-204ENST00000404321 FAM240AA0A1B0GVK7 77 aa8.9□□□□□ -0.98
PTPRN2-204ENST00000404321 Q5W150 140 aa8.9□□□□□ -0.98
PTPRN2-204ENST00000404321 HCG22E2RYF7 251 aa8.89□□□□□ -0.99
PTPRN2-204ENST00000404321 IGKV2D-30A0A075B6S6 120 aa8.88□□□□□ -0.99
PTPRN2-204ENST00000404321 MT-ATP8P03928 68 aa8.88□□□□□ -0.99
PTPRN2-204ENST00000404321 IGKV2-30P06310 120 aa8.88□□□□□ -0.99
PTPRN2-204ENST00000404321 ACYP1P07311 99 aa8.86□□□□□ -0.99
PTPRN2-204ENST00000404321 MT1FP04733 61 aa8.85□□□□□ -0.99
PTPRN2-204ENST00000404321 KRTAP10-10P60014 251 aa8.81□□□□□ -1
PTPRN2-204ENST00000404321 C7orf65Q6ZTY9 151 aa8.81□□□□□ -1
PTPRN2-204ENST00000404321 USH2AO75445 5202 aa8.8□□□□□ -1
PTPRN2-204ENST00000404321 CXCL6P80162 114 aa8.78□□□□□ -1
PTPRN2-204ENST00000404321 H1FX-AS1Q4G0G2 97 aa8.75□□□□□ -1.01
PTPRN2-204ENST00000404321 SSPOA2VEC9 5147 aa8.73□□□□□ -1.01
PTPRN2-204ENST00000404321 LINC00643Q86TS7 51 aa8.73□□□□□ -1.01
PTPRN2-204ENST00000404321 ANAPC13Q9BS18 74 aa8.73□□□□□ -1.01
PTPRN2-204ENST00000404321 C4orf26Q17RF5 130 aa8.72□□□□□ -1.01
PTPRN2-204ENST00000404321 KRTAP9-3Q9BYQ3 159 aa8.72□□□□□ -1.01
PTPRN2-204ENST00000404321 IMUPQ9GZP8 106 aa8.72□□□□□ -1.01
PTPRN2-204ENST00000404321 LCE2BO14633 110 aa8.68□□□□□ -1.02
PTPRN2-204ENST00000404321 TP53AIP1Q9HCN2 124 aa8.62□□□□□ -1.03
PTPRN2-204ENST00000404321 KRTAP3-1Q9BYR8 98 aa8.57□□□□□ -1.04
PTPRN2-204ENST00000404321 FAM236AA0A1B0GUQ0 79 aa8.56□□□□□ -1.04
PTPRN2-204ENST00000404321 FAM236BA0A1B0GV22 79 aa8.56□□□□□ -1.04
PTPRN2-204ENST00000404321 ATP5EP2Q5VTU8 51 aa8.56□□□□□ -1.04
PTPRN2-204ENST00000404321 HIST1H4AP62805 103 aaKnown RBP8.55□□□□□ -1.04
PTPRN2-204ENST00000404321 C1orf64Q8NEQ6 169 aa8.54□□□□□ -1.04
PTPRN2-204ENST00000404321 C5orf47Q569G3 176 aa8.52□□□□□ -1.05
PTPRN2-204ENST00000404321 CCDC179H3BU77 68 aa8.51□□□□□ -1.05
PTPRN2-204ENST00000404321 ATOX1O00244 68 aa8.5□□□□□ -1.05
PTPRN2-204ENST00000404321 KRTAP19-1Q8IUB9 90 aa8.49□□□□□ -1.05
PTPRN2-204ENST00000404321 S4R3F8 94 aa8.48□□□□□ -1.05
PTPRN2-204ENST00000404321 FCGBPQ9Y6R7 5405 aaPredicted RBP8.48□□□□□ -1.05
PTPRN2-204ENST00000404321 TRAV22A0A0B4J277 110 aa8.48□□□□□ -1.05
PTPRN2-204ENST00000404321 CYP4F30PQ9H0H9 118 aa8.48□□□□□ -1.05
PTPRN2-204ENST00000404321 A0A087WVE0 104 aa8.46□□□□□ -1.06
PTPRN2-204ENST00000404321 UQCRQO14949 82 aa8.46□□□□□ -1.06
PTPRN2-204ENST00000404321 LCA10Q71F78 164 aa8.44□□□□□ -1.06
PTPRN2-204ENST00000404321 COX7CP15954 63 aa8.43□□□□□ -1.06
PTPRN2-204ENST00000404321 LOC101927531A0A1B0GV80 90 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms