RNA–Protein interactions for RNA: ENST00000404291.3

STAG3L1-201, Transcript of stromal antigen 3-like 1 (pseudogene), humanhuman

TSL 3 BASIC

Gene STAG3L1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3L1-201ENST00000404291 IGKV4-1P06312 121 aa4.62□□□□□ -1.67
STAG3L1-201ENST00000404291 SMIM20Q8N5G0 67 aa4.62□□□□□ -1.67
STAG3L1-201ENST00000404291 TRAV7A0A075B6U4 112 aa4.61□□□□□ -1.67
STAG3L1-201ENST00000404291 C9orf153Q5TBE3 101 aa4.61□□□□□ -1.67
STAG3L1-201ENST00000404291 LINC00483Q53H64 154 aa4.59□□□□□ -1.67
STAG3L1-201ENST00000404291 FSIP2Q5CZC0 6907 aa4.58□□□□□ -1.68
STAG3L1-201ENST00000404291 DSCR10P59022 87 aa4.58□□□□□ -1.68
STAG3L1-201ENST00000404291 SPAG11AQ6PDA7 123 aa4.58□□□□□ -1.68
STAG3L1-201ENST00000404291 A0A0G2JQZ4 141 aa4.57□□□□□ -1.68
STAG3L1-201ENST00000404291 ASB16-AS1Q495Z4 193 aa4.57□□□□□ -1.68
STAG3L1-201ENST00000404291 LCE2DQ5TA82 110 aaPredicted RBP4.57□□□□□ -1.68
STAG3L1-201ENST00000404291 FP248Q71RG6 208 aaPredicted RBP4.57□□□□□ -1.68
STAG3L1-201ENST00000404291 Q8N9L7 120 aa4.57□□□□□ -1.68
STAG3L1-201ENST00000404291 SS18L2Q9UHA2 77 aa4.57□□□□□ -1.68
STAG3L1-201ENST00000404291 KRTAP13-3Q3SY46 172 aa4.56□□□□□ -1.68
STAG3L1-201ENST00000404291 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
STAG3L1-201ENST00000404291 A0A087WSZ3 146 aa4.55□□□□□ -1.68
STAG3L1-201ENST00000404291 C4orf48Q5BLP8 95 aa4.55□□□□□ -1.68
STAG3L1-201ENST00000404291 CYSTM1Q9H1C7 97 aa4.55□□□□□ -1.68
STAG3L1-201ENST00000404291 ZNF706Q9Y5V0 76 aaPredicted RBP4.55□□□□□ -1.68
STAG3L1-201ENST00000404291 OCR1Q9BZK8 76 aa4.54□□□□□ -1.68
STAG3L1-201ENST00000404291 LINC00472Q9H8W2 130 aa4.54□□□□□ -1.68
STAG3L1-201ENST00000404291 KLKP1Q107X0 134 aa4.53□□□□□ -1.68
STAG3L1-201ENST00000404291 CRCT1Q9UGL9 99 aa4.53□□□□□ -1.68
STAG3L1-201ENST00000404291 K7EQZ3 153 aa4.52□□□□□ -1.69
STAG3L1-201ENST00000404291 SEC61BP60468 96 aaKnown RBP4.52□□□□□ -1.69
STAG3L1-201ENST00000404291 TMEM258P61165 79 aa4.52□□□□□ -1.69
STAG3L1-201ENST00000404291 C20orf197Q8N268 126 aa4.52□□□□□ -1.69
STAG3L1-201ENST00000404291 SPINK1P00995 79 aa4.51□□□□□ -1.69
STAG3L1-201ENST00000404291 J3KT08 172 aa4.5□□□□□ -1.69
STAG3L1-201ENST00000404291 RPS28P62857 69 aaKnown RBP4.5□□□□□ -1.69
STAG3L1-201ENST00000404291 A8MWP4 228 aa4.49□□□□□ -1.69
STAG3L1-201ENST00000404291 HCG22E2RYF7 251 aa4.49□□□□□ -1.69
STAG3L1-201ENST00000404291 H7BZZ5 65 aa4.49□□□□□ -1.69
STAG3L1-201ENST00000404291 NDUFC1O43677 76 aa4.49□□□□□ -1.69
STAG3L1-201ENST00000404291 DEFB116Q30KQ4 102 aa4.49□□□□□ -1.69
STAG3L1-201ENST00000404291 PRR15Q8IV56 129 aa4.49□□□□□ -1.69
STAG3L1-201ENST00000404291 IGLV9-49A0A0B4J1Y8 123 aa4.48□□□□□ -1.69
STAG3L1-201ENST00000404291 LCE2CQ5TA81 110 aa4.48□□□□□ -1.69
STAG3L1-201ENST00000404291 TMEM254Q8TBM7 123 aa4.48□□□□□ -1.69
STAG3L1-201ENST00000404291 RPS29P62273 56 aaKnown RBP4.47□□□□□ -1.69
STAG3L1-201ENST00000404291 MOBPQ13875 183 aa4.47□□□□□ -1.69
STAG3L1-201ENST00000404291 XP32Q5T750 250 aa4.47□□□□□ -1.69
STAG3L1-201ENST00000404291 Q96NJ1 140 aa4.47□□□□□ -1.69
STAG3L1-201ENST00000404291 SSBP3-AS1Q7Z2R9 100 aa4.46□□□□□ -1.7
STAG3L1-201ENST00000404291 SNURFQ9Y675 71 aa4.46□□□□□ -1.7
STAG3L1-201ENST00000404291 CD164Q04900 197 aa4.45□□□□□ -1.7
STAG3L1-201ENST00000404291 KRTAP19-2Q3LHN2 52 aa4.45□□□□□ -1.7
STAG3L1-201ENST00000404291 C5orf47Q569G3 176 aa4.45□□□□□ -1.7
STAG3L1-201ENST00000404291 ZCCHC13Q8WW36 166 aaKnown RBP4.45□□□□□ -1.7
STAG3L1-201ENST00000404291 MT1HP80294 61 aa4.43□□□□□ -1.7
STAG3L1-201ENST00000404291 CASC2Q6XLA1 102 aa4.43□□□□□ -1.7
STAG3L1-201ENST00000404291 MMP24-AS1A0A0U1RRL7 71 aa4.42□□□□□ -1.7
STAG3L1-201ENST00000404291 FAM236DA0A1B0GTK5 79 aa4.42□□□□□ -1.7
STAG3L1-201ENST00000404291 NDUFB1O75438 58 aa4.42□□□□□ -1.7
STAG3L1-201ENST00000404291 FAM236CP0DP71 79 aa4.42□□□□□ -1.7
STAG3L1-201ENST00000404291 WFDC13Q8IUB5 93 aa4.42□□□□□ -1.7
STAG3L1-201ENST00000404291 ATP5EP56381 51 aaPredicted RBP4.41□□□□□ -1.7
STAG3L1-201ENST00000404291 HRCT1Q6UXD1 115 aa4.41□□□□□ -1.7
STAG3L1-201ENST00000404291 H3BPC8 53 aa4.4□□□□□ -1.71
STAG3L1-201ENST00000404291 Q5XG85 94 aa4.4□□□□□ -1.71
STAG3L1-201ENST00000404291 A0A1B0GVX0 72 aa4.39□□□□□ -1.71
STAG3L1-201ENST00000404291 hDV103S1A0JD37 113 aa4.39□□□□□ -1.71
STAG3L1-201ENST00000404291 PCOTHQ58A44 107 aa4.39□□□□□ -1.71
STAG3L1-201ENST00000404291 C8orf17Q9NRJ1 99 aa4.39□□□□□ -1.71
STAG3L1-201ENST00000404291 SERP1Q9Y6X1 66 aa4.39□□□□□ -1.71
STAG3L1-201ENST00000404291 LORP23490 312 aaPredicted RBP4.38□□□□□ -1.71
STAG3L1-201ENST00000404291 KRTAP10-6P60371 365 aaPredicted RBP4.37□□□□□ -1.71
STAG3L1-201ENST00000404291 TP53AIP1Q9HCN2 124 aa4.37□□□□□ -1.71
STAG3L1-201ENST00000404291 C9orf92A6NGG3 77 aa4.36□□□□□ -1.71
STAG3L1-201ENST00000404291 MP68P56378 58 aa4.36□□□□□ -1.71
STAG3L1-201ENST00000404291 H0Y9P7 68 aa4.35□□□□□ -1.71
STAG3L1-201ENST00000404291 IGHV6-1A0A0B4J1U7 121 aa4.34□□□□□ -1.71
STAG3L1-201ENST00000404291 NOTCH2NLQ7Z3S9 236 aa4.34□□□□□ -1.71
STAG3L1-201ENST00000404291 MRPL34Q9BQ48 92 aaKnown RBP4.34□□□□□ -1.71
STAG3L1-201ENST00000404291 LIMD2Q9BT23 127 aa4.34□□□□□ -1.71
STAG3L1-201ENST00000404291 TRAV22A0A0B4J277 110 aa4.33□□□□□ -1.72
STAG3L1-201ENST00000404291 C8orf87E5RJ46 101 aa4.33□□□□□ -1.72
STAG3L1-201ENST00000404291 C1orf195Q5TG92 126 aa4.33□□□□□ -1.72
STAG3L1-201ENST00000404291 LINC00208Q96KT6 92 aa4.33□□□□□ -1.72
STAG3L1-201ENST00000404291 CYP4F30PQ9H0H9 118 aa4.33□□□□□ -1.72
STAG3L1-201ENST00000404291 M0R2T5 61 aa4.32□□□□□ -1.72
STAG3L1-201ENST00000404291 SPANXA2-OT1Q8N9U9 137 aa4.31□□□□□ -1.72
STAG3L1-201ENST00000404291 C1orf64Q8NEQ6 169 aa4.31□□□□□ -1.72
STAG3L1-201ENST00000404291 SMIM26A0A096LP01 95 aa4.3□□□□□ -1.72
STAG3L1-201ENST00000404291 COX6B2Q6YFQ2 88 aa4.29□□□□□ -1.72
STAG3L1-201ENST00000404291 LINC00313P59037 77 aa4.28□□□□□ -1.72
STAG3L1-201ENST00000404291 RPL37P61927 97 aaKnown RBP4.28□□□□□ -1.72
STAG3L1-201ENST00000404291 Q8N9P0 234 aaPredicted RBP4.28□□□□□ -1.72
STAG3L1-201ENST00000404291 FLGP20930 4061 aaPredicted RBP4.27□□□□□ -1.73
STAG3L1-201ENST00000404291 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
STAG3L1-201ENST00000404291 NDUFS5O43920 106 aa4.26□□□□□ -1.73
STAG3L1-201ENST00000404291 Q5W150 140 aa4.25□□□□□ -1.73
STAG3L1-201ENST00000404291 LOC101927531A0A1B0GV80 90 aa4.24□□□□□ -1.73
STAG3L1-201ENST00000404291 KRTAP9-7A8MTY7 169 aa4.23□□□□□ -1.73
STAG3L1-201ENST00000404291 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
STAG3L1-201ENST00000404291 C4orf26Q17RF5 130 aa4.23□□□□□ -1.73
STAG3L1-201ENST00000404291 USH2AO75445 5202 aa4.21□□□□□ -1.74
STAG3L1-201ENST00000404291 SSPOA2VEC9 5147 aa4.2□□□□□ -1.74
STAG3L1-201ENST00000404291 Q1T7F1 81 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms