RNA–Protein interactions for RNA: ENST00000404249.7

CDK11A-208, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK11A, Length 2,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-208ENST00000404249 NOTCH2NLQ7Z3S9 236 aa10.53□□□□□ -0.72
CDK11A-208ENST00000404249 COA5Q86WW8 74 aa10.52□□□□□ -0.73
CDK11A-208ENST00000404249 Q8N9P0 234 aaPredicted RBP10.52□□□□□ -0.73
CDK11A-208ENST00000404249 FBN3Q75N90 2809 aa10.5□□□□□ -0.73
CDK11A-208ENST00000404249 C1orf195Q5TG92 126 aa10.49□□□□□ -0.73
CDK11A-208ENST00000404249 Q5VV11 94 aa10.48□□□□□ -0.73
CDK11A-208ENST00000404249 SPINK6Q6UWN8 80 aa10.48□□□□□ -0.73
CDK11A-208ENST00000404249 LIMD2Q9BT23 127 aa10.47□□□□□ -0.73
CDK11A-208ENST00000404249 CIRBP-AS1Q8TBR5 109 aa10.46□□□□□ -0.73
CDK11A-208ENST00000404249 LY6G6CO95867 125 aa10.43□□□□□ -0.74
CDK11A-208ENST00000404249 PRR15LQ9BU68 103 aa10.42□□□□□ -0.74
CDK11A-208ENST00000404249 MEGF8Q7Z7M0 2845 aa10.41□□□□□ -0.74
CDK11A-208ENST00000404249 SSBP3-AS1Q7Z2R9 100 aa10.4□□□□□ -0.74
CDK11A-208ENST00000404249 TGP01266 2768 aa10.38□□□□□ -0.75
CDK11A-208ENST00000404249 LOC101927531A0A1B0GV80 90 aa10.38□□□□□ -0.75
CDK11A-208ENST00000404249 ALMS1Q8TCU4 4167 aa10.38□□□□□ -0.75
CDK11A-208ENST00000404249 CHKB-CPT1BH3BT56 60 aa10.37□□□□□ -0.75
CDK11A-208ENST00000404249 Q5W150 140 aa10.37□□□□□ -0.75
CDK11A-208ENST00000404249 KRTAP10-2P60368 255 aa10.36□□□□□ -0.75
CDK11A-208ENST00000404249 KRTAP13-3Q3SY46 172 aa10.36□□□□□ -0.75
CDK11A-208ENST00000404249 C8orf87E5RJ46 101 aa10.35□□□□□ -0.75
CDK11A-208ENST00000404249 HRES1P13985 223 aa10.34□□□□□ -0.75
CDK11A-208ENST00000404249 DNAH6Q9C0G6 4158 aa10.33□□□□□ -0.76
CDK11A-208ENST00000404249 Q75L30 129 aa10.33□□□□□ -0.76
CDK11A-208ENST00000404249 DNAH11Q96DT5 4516 aa10.32□□□□□ -0.76
CDK11A-208ENST00000404249 A8MU10 97 aa10.32□□□□□ -0.76
CDK11A-208ENST00000404249 DNAH5Q8TE73 4624 aa10.31□□□□□ -0.76
CDK11A-208ENST00000404249 SPAG11AQ6PDA7 123 aa10.29□□□□□ -0.76
CDK11A-208ENST00000404249 LINC01558Q9Y6Z2 57 aa10.29□□□□□ -0.76
CDK11A-208ENST00000404249 KRTAP13-2Q52LG2 175 aa10.28□□□□□ -0.76
CDK11A-208ENST00000404249 LINC00313P59037 77 aa10.26□□□□□ -0.77
CDK11A-208ENST00000404249 Q6ZSA8 131 aa10.25□□□□□ -0.77
CDK11A-208ENST00000404249 A6NED7 52 aa10.24□□□□□ -0.77
CDK11A-208ENST00000404249 KRTAP10-1P60331 282 aa10.24□□□□□ -0.77
CDK11A-208ENST00000404249 FAM229AH3BQW9 127 aa10.21□□□□□ -0.78
CDK11A-208ENST00000404249 DNHD1Q96M86 4753 aa10.2□□□□□ -0.78
CDK11A-208ENST00000404249 LCA10Q71F78 164 aa10.19□□□□□ -0.78
CDK11A-208ENST00000404249 RETNLBQ9BQ08 111 aa10.17□□□□□ -0.78
CDK11A-208ENST00000404249 ACYP2P14621 99 aa10.16□□□□□ -0.78
CDK11A-208ENST00000404249 PMAIP1Q13794 54 aa10.16□□□□□ -0.78
CDK11A-208ENST00000404249 PRR26Q8N8Z3 221 aa10.16□□□□□ -0.78
CDK11A-208ENST00000404249 KRTAP1-4P0C5Y4 121 aa10.16□□□□□ -0.78
CDK11A-208ENST00000404249 PKD1P98161 4303 aa10.15□□□□□ -0.78
CDK11A-208ENST00000404249 H3BS24 57 aa10.15□□□□□ -0.79
CDK11A-208ENST00000404249 KRTAP16-1A8MUX0 517 aa10.14□□□□□ -0.79
CDK11A-208ENST00000404249 DMAC1Q96GE9 116 aa10.14□□□□□ -0.79
CDK11A-208ENST00000404249 CDC42SE1Q9NRR8 79 aa10.14□□□□□ -0.79
CDK11A-208ENST00000404249 IGKV2-30P06310 120 aa10.13□□□□□ -0.79
CDK11A-208ENST00000404249 SPTSSBQ8NFR3 76 aa10.12□□□□□ -0.79
CDK11A-208ENST00000404249 LRP1BQ9NZR2 4599 aa10.12□□□□□ -0.79
CDK11A-208ENST00000404249 ATP11AUNQ6ZP68 121 aa10.11□□□□□ -0.79
CDK11A-208ENST00000404249 SPINK7P58062 85 aa10.09□□□□□ -0.79
CDK11A-208ENST00000404249 FAT2Q9NYQ8 4349 aa10.08□□□□□ -0.8
CDK11A-208ENST00000404249 HYDINQ4G0P3 5121 aa10.08□□□□□ -0.8
CDK11A-208ENST00000404249 PLA2G1BP04054 148 aaKnown RBP10.03□□□□□ -0.8
CDK11A-208ENST00000404249 TYMSOSQ8TAI1 123 aa10.03□□□□□ -0.8
CDK11A-208ENST00000404249 VPS13BQ7Z7G8 4022 aa10.02□□□□□ -0.8
CDK11A-208ENST00000404249 IGKV2D-30A0A075B6S6 120 aa9.99□□□□□ -0.81
CDK11A-208ENST00000404249 SPINK1P00995 79 aa9.99□□□□□ -0.81
CDK11A-208ENST00000404249 A6NN06 94 aa9.98□□□□□ -0.81
CDK11A-208ENST00000404249 KTN1-AS1Q86SY8 53 aa9.95□□□□□ -0.82
CDK11A-208ENST00000404249 A0A1B0GU69 56 aa9.91□□□□□ -0.82
CDK11A-208ENST00000404249 C7orf65Q6ZTY9 151 aa9.9□□□□□ -0.82
CDK11A-208ENST00000404249 LINC00304Q8N9R0 145 aa9.9□□□□□ -0.83
CDK11A-208ENST00000404249 RPS29P62273 56 aaKnown RBP9.87□□□□□ -0.83
CDK11A-208ENST00000404249 SACSQ9NZJ4 4579 aa9.81□□□□□ -0.84
CDK11A-208ENST00000404249 PKHD1P08F94 4074 aa9.8□□□□□ -0.84
CDK11A-208ENST00000404249 SMR3BP02814 79 aaPredicted RBP9.77□□□□□ -0.85
CDK11A-208ENST00000404249 SPATA8Q6RVD6 105 aa9.75□□□□□ -0.85
CDK11A-208ENST00000404249 Q8N1X5 172 aa9.75□□□□□ -0.85
CDK11A-208ENST00000404249 UQCR11O14957 56 aa9.73□□□□□ -0.85
CDK11A-208ENST00000404249 MIR22HGQ0VDD5 57 aa9.71□□□□□ -0.85
CDK11A-208ENST00000404249 C9orf92A6NGG3 77 aa9.7□□□□□ -0.86
CDK11A-208ENST00000404249 RBM12B-AS1Q9P1G2 102 aa9.7□□□□□ -0.86
CDK11A-208ENST00000404249 DYNC1H1Q14204 4646 aaKnown RBP9.7□□□□□ -0.86
CDK11A-208ENST00000404249 C20orf166-AS1Q96NR2 134 aa9.68□□□□□ -0.86
CDK11A-208ENST00000404249 A8MUU9 505 aa9.67□□□□□ -0.86
CDK11A-208ENST00000404249 KRTAP10-4P60372 401 aaPredicted RBP9.66□□□□□ -0.86
CDK11A-208ENST00000404249 KRTAP21-3Q3LHN1 58 aa9.66□□□□□ -0.86
CDK11A-208ENST00000404249 PKHD1L1Q86WI1 4243 aa9.66□□□□□ -0.86
CDK11A-208ENST00000404249 A0A1B0GVY2 172 aa9.65□□□□□ -0.86
CDK11A-208ENST00000404249 A0A0A0MQY5 61 aa9.63□□□□□ -0.87
CDK11A-208ENST00000404249 APOBP04114 4563 aaKnown RBP9.62□□□□□ -0.87
CDK11A-208ENST00000404249 FAT1Q14517 4588 aa9.56□□□□□ -0.88
CDK11A-208ENST00000404249 KRTAP3-1Q9BYR8 98 aa9.53□□□□□ -0.88
CDK11A-208ENST00000404249 PRAC1Q96KF2 57 aa9.51□□□□□ -0.89
CDK11A-208ENST00000404249 ADM2Q7Z4H4 148 aa9.5□□□□□ -0.89
CDK11A-208ENST00000404249 FLG2Q5D862 2391 aaPredicted RBP9.42□□□□□ -0.9
CDK11A-208ENST00000404249 RYR2Q92736 4967 aa9.42□□□□□ -0.9
CDK11A-208ENST00000404249 H0YAA0 97 aa9.41□□□□□ -0.9
CDK11A-208ENST00000404249 COX6B2Q6YFQ2 88 aa9.39□□□□□ -0.91
CDK11A-208ENST00000404249 A0A1B0GU33 70 aa9.36□□□□□ -0.91
CDK11A-208ENST00000404249 H1FX-AS1Q4G0G2 97 aa9.34□□□□□ -0.91
CDK11A-208ENST00000404249 FAT3Q8TDW7 4589 aa9.29□□□□□ -0.92
CDK11A-208ENST00000404249 KRTAP10-8P60410 259 aa9.29□□□□□ -0.92
CDK11A-208ENST00000404249 TNXBP22105 4242 aa9.28□□□□□ -0.92
CDK11A-208ENST00000404249 CSAG1Q6PB30 78 aa9.24□□□□□ -0.93
CDK11A-208ENST00000404249 Q5VSD8 79 aa9.23□□□□□ -0.93
CDK11A-208ENST00000404249 KMT2CQ8NEZ4 4911 aaKnown RBP9.22□□□□□ -0.93
CDK11A-208ENST00000404249 LRP1Q07954 4544 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms