RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 LORP23490 312 aaPredicted RBP9.74□□□□□ -0.85
HDAC11-204ENST00000404040 PCOTHQ58A44 107 aa9.73□□□□□ -0.85
HDAC11-204ENST00000404040 KRTAP10-6P60371 365 aaPredicted RBP9.71□□□□□ -0.86
HDAC11-204ENST00000404040 Q96NJ1 140 aa9.69□□□□□ -0.86
HDAC11-204ENST00000404040 LINC00472Q9H8W2 130 aa9.68□□□□□ -0.86
HDAC11-204ENST00000404040 J3KT08 172 aa9.67□□□□□ -0.86
HDAC11-204ENST00000404040 IGKV4-1P06312 121 aa9.67□□□□□ -0.86
HDAC11-204ENST00000404040 SIGMAR1Q99720 223 aa9.66□□□□□ -0.86
HDAC11-204ENST00000404040 A0A1B0GV90 55 aa9.64□□□□□ -0.87
HDAC11-204ENST00000404040 NREPQ16612 68 aa9.64□□□□□ -0.87
HDAC11-204ENST00000404040 ETDBQ3ZM63 59 aa9.64□□□□□ -0.87
HDAC11-204ENST00000404040 C9orf92A6NGG3 77 aa9.63□□□□□ -0.87
HDAC11-204ENST00000404040 FLGP20930 4061 aaPredicted RBP9.62□□□□□ -0.87
HDAC11-204ENST00000404040 M0R2T5 61 aa9.59□□□□□ -0.87
HDAC11-204ENST00000404040 DEFB116Q30KQ4 102 aa9.59□□□□□ -0.87
HDAC11-204ENST00000404040 NDUFB1O75438 58 aa9.58□□□□□ -0.88
HDAC11-204ENST00000404040 LINC00313P59037 77 aa9.54□□□□□ -0.88
HDAC11-204ENST00000404040 UBL5Q9BZL1 73 aa9.54□□□□□ -0.88
HDAC11-204ENST00000404040 A0A1B0GVX0 72 aa9.53□□□□□ -0.88
HDAC11-204ENST00000404040 C8orf87E5RJ46 101 aa9.53□□□□□ -0.88
HDAC11-204ENST00000404040 IGHV6-1A0A0B4J1U7 121 aa9.52□□□□□ -0.89
HDAC11-204ENST00000404040 A8MWP4 228 aa9.52□□□□□ -0.89
HDAC11-204ENST00000404040 COX6B2Q6YFQ2 88 aa9.52□□□□□ -0.89
HDAC11-204ENST00000404040 Q6ZVQ6 151 aa9.52□□□□□ -0.89
HDAC11-204ENST00000404040 BPY2O14599 106 aa9.5□□□□□ -0.89
HDAC11-204ENST00000404040 LINC00846Q9NV44 126 aa9.5□□□□□ -0.89
HDAC11-204ENST00000404040 ACYP1P07311 99 aa9.49□□□□□ -0.89
HDAC11-204ENST00000404040 DSCR10P59022 87 aa9.49□□□□□ -0.89
HDAC11-204ENST00000404040 RPL37P61927 97 aaKnown RBP9.49□□□□□ -0.89
HDAC11-204ENST00000404040 Q75L30 129 aa9.47□□□□□ -0.89
HDAC11-204ENST00000404040 FAM240AA0A1B0GVK7 77 aa9.45□□□□□ -0.9
HDAC11-204ENST00000404040 IGKV3D-7A0A0C4DH55 119 aa9.44□□□□□ -0.9
HDAC11-204ENST00000404040 KRTAP9-7A8MTY7 169 aa9.44□□□□□ -0.9
HDAC11-204ENST00000404040 PRR15Q8IV56 129 aa9.44□□□□□ -0.9
HDAC11-204ENST00000404040 C20orf166-AS1Q96NR2 134 aa9.44□□□□□ -0.9
HDAC11-204ENST00000404040 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.43□□□□□ -0.9
HDAC11-204ENST00000404040 A8MUU9 505 aa9.41□□□□□ -0.9
HDAC11-204ENST00000404040 ATP11AUNQ6ZP68 121 aa9.41□□□□□ -0.9
HDAC11-204ENST00000404040 NOTCH2NLQ7Z3S9 236 aa9.4□□□□□ -0.9
HDAC11-204ENST00000404040 C8orf17Q9NRJ1 99 aa9.4□□□□□ -0.9
HDAC11-204ENST00000404040 SSPOA2VEC9 5147 aa9.4□□□□□ -0.91
HDAC11-204ENST00000404040 KRTAP16-1A8MUX0 517 aa9.39□□□□□ -0.91
HDAC11-204ENST00000404040 J3QR89 54 aa9.39□□□□□ -0.91
HDAC11-204ENST00000404040 K7EQZ3 153 aa9.38□□□□□ -0.91
HDAC11-204ENST00000404040 CXCL6P80162 114 aa9.36□□□□□ -0.91
HDAC11-204ENST00000404040 USH2AO75445 5202 aa9.35□□□□□ -0.91
HDAC11-204ENST00000404040 MMP24-AS1A0A0U1RRL7 71 aa9.32□□□□□ -0.92
HDAC11-204ENST00000404040 TMEM254Q8TBM7 123 aa9.32□□□□□ -0.92
HDAC11-204ENST00000404040 hDV103S1A0JD37 113 aa9.31□□□□□ -0.92
HDAC11-204ENST00000404040 ATP5EP2Q5VTU8 51 aa9.31□□□□□ -0.92
HDAC11-204ENST00000404040 Q8N9P0 234 aaPredicted RBP9.3□□□□□ -0.92
HDAC11-204ENST00000404040 Q8N9L7 120 aa9.29□□□□□ -0.92
HDAC11-204ENST00000404040 MRPL34Q9BQ48 92 aaKnown RBP9.29□□□□□ -0.92
HDAC11-204ENST00000404040 CASC2Q6XLA1 102 aa9.26□□□□□ -0.93
HDAC11-204ENST00000404040 LINC00643Q86TS7 51 aa9.25□□□□□ -0.93
HDAC11-204ENST00000404040 HCG22E2RYF7 251 aa9.24□□□□□ -0.93
HDAC11-204ENST00000404040 WFDC13Q8IUB5 93 aa9.23□□□□□ -0.93
HDAC11-204ENST00000404040 KRTAP9-8Q9BYQ0 159 aa9.22□□□□□ -0.93
HDAC11-204ENST00000404040 FCGBPQ9Y6R7 5405 aaPredicted RBP9.22□□□□□ -0.93
HDAC11-204ENST00000404040 NDUFS5O43920 106 aa9.21□□□□□ -0.94
HDAC11-204ENST00000404040 ZCCHC13Q8WW36 166 aaKnown RBP9.21□□□□□ -0.94
HDAC11-204ENST00000404040 K7ERU9 68 aa9.19□□□□□ -0.94
HDAC11-204ENST00000404040 HIST1H4AP62805 103 aaKnown RBP9.15□□□□□ -0.94
HDAC11-204ENST00000404040 TP53AIP1Q9HCN2 124 aa9.1□□□□□ -0.95
HDAC11-204ENST00000404040 SYNE2Q8WXH0 6885 aaKnown RBP9.08□□□□□ -0.96
HDAC11-204ENST00000404040 MT2AP02795 61 aa9.06□□□□□ -0.96
HDAC11-204ENST00000404040 KRTAP19-1Q8IUB9 90 aa9.06□□□□□ -0.96
HDAC11-204ENST00000404040 MACF1Q9UPN3 7388 aaKnown RBP9.05□□□□□ -0.96
HDAC11-204ENST00000404040 SPINK7P58062 85 aa9.04□□□□□ -0.96
HDAC11-204ENST00000404040 LCE2BO14633 110 aa9.02□□□□□ -0.97
HDAC11-204ENST00000404040 RBM12B-AS1Q9P1G2 102 aa9□□□□□ -0.97
HDAC11-204ENST00000404040 A0A087WVE0 104 aa8.99□□□□□ -0.97
HDAC11-204ENST00000404040 MT1FP04733 61 aa8.99□□□□□ -0.97
HDAC11-204ENST00000404040 Q5W150 140 aa8.99□□□□□ -0.97
HDAC11-204ENST00000404040 SVIPQ8NHG7 77 aa8.99□□□□□ -0.97
HDAC11-204ENST00000404040 IMUPQ9GZP8 106 aa8.98□□□□□ -0.97
HDAC11-204ENST00000404040 C7orf65Q6ZTY9 151 aa8.97□□□□□ -0.97
HDAC11-204ENST00000404040 HRES1P13985 223 aa8.95□□□□□ -0.98
HDAC11-204ENST00000404040 KRTAP9-3Q9BYQ3 159 aa8.94□□□□□ -0.98
HDAC11-204ENST00000404040 IGKV2D-30A0A075B6S6 120 aa8.93□□□□□ -0.98
HDAC11-204ENST00000404040 UQCRQO14949 82 aa8.93□□□□□ -0.98
HDAC11-204ENST00000404040 IGKV2-30P06310 120 aa8.93□□□□□ -0.98
HDAC11-204ENST00000404040 FAM236DA0A1B0GTK5 79 aa8.92□□□□□ -0.98
HDAC11-204ENST00000404040 FAM236CP0DP71 79 aa8.92□□□□□ -0.98
HDAC11-204ENST00000404040 MPLKIPQ8TAP9 179 aa8.91□□□□□ -0.98
HDAC11-204ENST00000404040 TRAV22A0A0B4J277 110 aa8.9□□□□□ -0.98
HDAC11-204ENST00000404040 KRTAP10-10P60014 251 aa8.9□□□□□ -0.98
HDAC11-204ENST00000404040 MT-ATP8P03928 68 aa8.89□□□□□ -0.99
HDAC11-204ENST00000404040 ATOX1O00244 68 aa8.87□□□□□ -0.99
HDAC11-204ENST00000404040 SCGB1A1P11684 91 aa8.87□□□□□ -0.99
HDAC11-204ENST00000404040 LOC101927531A0A1B0GV80 90 aa8.83□□□□□ -1
HDAC11-204ENST00000404040 OCR1Q9BZK8 76 aa8.82□□□□□ -1
HDAC11-204ENST00000404040 H0Y9P7 68 aa8.81□□□□□ -1
HDAC11-204ENST00000404040 PCP4P48539 62 aa8.79□□□□□ -1
HDAC11-204ENST00000404040 MP68P56378 58 aa8.79□□□□□ -1
HDAC11-204ENST00000404040 KRTAP19-6Q3LI70 58 aa8.78□□□□□ -1
HDAC11-204ENST00000404040 C5orf47Q569G3 176 aa8.78□□□□□ -1
HDAC11-204ENST00000404040 SMIM20Q8N5G0 67 aa8.77□□□□□ -1.01
HDAC11-204ENST00000404040 CYP4F30PQ9H0H9 118 aa8.76□□□□□ -1.01
HDAC11-204ENST00000404040 FAM236AA0A1B0GUQ0 79 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms