RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 SPACA4Q8TDM5 124 aa8.51□□□□□ -1.05
ATG3-202ENST00000402314 A6NN06 94 aa8.51□□□□□ -1.05
ATG3-202ENST00000402314 SPRR1BP22528 89 aa8.51□□□□□ -1.05
ATG3-202ENST00000402314 A0A087X002 238 aa8.5□□□□□ -1.05
ATG3-202ENST00000402314 H3BPC8 53 aa8.5□□□□□ -1.05
ATG3-202ENST00000402314 NOTCH2NLQ7Z3S9 236 aa8.5□□□□□ -1.05
ATG3-202ENST00000402314 DNAH17Q9UFH2 4485 aa8.49□□□□□ -1.05
ATG3-202ENST00000402314 HRES1P13985 223 aa8.48□□□□□ -1.05
ATG3-202ENST00000402314 SPINK6Q6UWN8 80 aa8.48□□□□□ -1.05
ATG3-202ENST00000402314 CDC42SE1Q9NRR8 79 aa8.48□□□□□ -1.05
ATG3-202ENST00000402314 RTL8CO15255 209 aa8.48□□□□□ -1.05
ATG3-202ENST00000402314 PRAC1Q96KF2 57 aa8.48□□□□□ -1.05
ATG3-202ENST00000402314 PSORS1C2Q9UIG4 136 aa8.46□□□□□ -1.05
ATG3-202ENST00000402314 DNAH6Q9C0G6 4158 aa8.45□□□□□ -1.06
ATG3-202ENST00000402314 RETNLBQ9BQ08 111 aa8.44□□□□□ -1.06
ATG3-202ENST00000402314 C8orf17Q9NRJ1 99 aa8.44□□□□□ -1.06
ATG3-202ENST00000402314 ADM2Q7Z4H4 148 aa8.43□□□□□ -1.06
ATG3-202ENST00000402314 LINC01558Q9Y6Z2 57 aa8.42□□□□□ -1.06
ATG3-202ENST00000402314 Q96NJ1 140 aa8.42□□□□□ -1.06
ATG3-202ENST00000402314 DNAH11Q96DT5 4516 aa8.41□□□□□ -1.06
ATG3-202ENST00000402314 CDK2AP2O75956 126 aa8.41□□□□□ -1.06
ATG3-202ENST00000402314 C7orf65Q6ZTY9 151 aa8.4□□□□□ -1.06
ATG3-202ENST00000402314 Q6ZR54 194 aa8.4□□□□□ -1.07
ATG3-202ENST00000402314 LY6G6CO95867 125 aa8.39□□□□□ -1.07
ATG3-202ENST00000402314 IGLV5-52A0A0A0MRZ9 124 aa8.38□□□□□ -1.07
ATG3-202ENST00000402314 WWC2-AS2Q96NR7 200 aa8.37□□□□□ -1.07
ATG3-202ENST00000402314 Q5W150 140 aa8.37□□□□□ -1.07
ATG3-202ENST00000402314 TP53AIP1Q9HCN2 124 aa8.35□□□□□ -1.07
ATG3-202ENST00000402314 A0A1B0GVX0 72 aa8.35□□□□□ -1.07
ATG3-202ENST00000402314 LINC00313P59037 77 aa8.35□□□□□ -1.07
ATG3-202ENST00000402314 C1orf134Q5TEV5 83 aa8.34□□□□□ -1.07
ATG3-202ENST00000402314 MRPL34Q9BQ48 92 aaKnown RBP8.34□□□□□ -1.07
ATG3-202ENST00000402314 PLAC8Q9NZF1 115 aa8.34□□□□□ -1.07
ATG3-202ENST00000402314 DNAH5Q8TE73 4624 aa8.34□□□□□ -1.07
ATG3-202ENST00000402314 ZNF861PO60384 105 aa8.33□□□□□ -1.08
ATG3-202ENST00000402314 LINC00483Q53H64 154 aa8.33□□□□□ -1.08
ATG3-202ENST00000402314 HYDINQ4G0P3 5121 aa8.32□□□□□ -1.08
ATG3-202ENST00000402314 KRTAP10-2P60368 255 aa8.31□□□□□ -1.08
ATG3-202ENST00000402314 ALMS1Q8TCU4 4167 aa8.29□□□□□ -1.08
ATG3-202ENST00000402314 LRP1BQ9NZR2 4599 aa8.29□□□□□ -1.08
ATG3-202ENST00000402314 CIRBP-AS1Q8TBR5 109 aa8.28□□□□□ -1.08
ATG3-202ENST00000402314 ASB16-AS1Q495Z4 193 aa8.27□□□□□ -1.08
ATG3-202ENST00000402314 ZNF706Q9Y5V0 76 aaPredicted RBP8.27□□□□□ -1.09
ATG3-202ENST00000402314 IGLV7-43P04211 117 aa8.26□□□□□ -1.09
ATG3-202ENST00000402314 C8orf87E5RJ46 101 aa8.23□□□□□ -1.09
ATG3-202ENST00000402314 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
ATG3-202ENST00000402314 A0A1B0GU69 56 aa8.2□□□□□ -1.1
ATG3-202ENST00000402314 ACYP2P14621 99 aa8.19□□□□□ -1.1
ATG3-202ENST00000402314 KRTAP10-1P60331 282 aa8.17□□□□□ -1.1
ATG3-202ENST00000402314 PKD1P98161 4303 aa8.17□□□□□ -1.1
ATG3-202ENST00000402314 FAT2Q9NYQ8 4349 aa8.17□□□□□ -1.1
ATG3-202ENST00000402314 FLG2Q5D862 2391 aaPredicted RBP8.15□□□□□ -1.1
ATG3-202ENST00000402314 VPS13BQ7Z7G8 4022 aa8.14□□□□□ -1.11
ATG3-202ENST00000402314 SPINK1P00995 79 aa8.13□□□□□ -1.11
ATG3-202ENST00000402314 IGKV2D-30A0A075B6S6 120 aa8.12□□□□□ -1.11
ATG3-202ENST00000402314 IGKV2-30P06310 120 aa8.12□□□□□ -1.11
ATG3-202ENST00000402314 PKHD1P08F94 4074 aa8.11□□□□□ -1.11
ATG3-202ENST00000402314 KRTAP13-2Q52LG2 175 aa8.11□□□□□ -1.11
ATG3-202ENST00000402314 KRTAP13-3Q3SY46 172 aa8.1□□□□□ -1.11
ATG3-202ENST00000402314 MIR22HGQ0VDD5 57 aa8.09□□□□□ -1.11
ATG3-202ENST00000402314 LINC01554Q52M75 96 aa8.08□□□□□ -1.12
ATG3-202ENST00000402314 CSAG1Q6PB30 78 aa8.07□□□□□ -1.12
ATG3-202ENST00000402314 DMAC1Q96GE9 116 aa8.06□□□□□ -1.12
ATG3-202ENST00000402314 H3BS24 57 aa8.06□□□□□ -1.12
ATG3-202ENST00000402314 SSBP3-AS1Q7Z2R9 100 aa8.05□□□□□ -1.12
ATG3-202ENST00000402314 PLA2G1BP04054 148 aaKnown RBP8.04□□□□□ -1.12
ATG3-202ENST00000402314 Q6ZSA8 131 aa8.03□□□□□ -1.12
ATG3-202ENST00000402314 UQCR11O14957 56 aa8.03□□□□□ -1.12
ATG3-202ENST00000402314 SPATA8Q6RVD6 105 aa8.01□□□□□ -1.13
ATG3-202ENST00000402314 KRTAP1-4P0C5Y4 121 aa8□□□□□ -1.13
ATG3-202ENST00000402314 SACSQ9NZJ4 4579 aa7.99□□□□□ -1.13
ATG3-202ENST00000402314 Q8N1X5 172 aa7.98□□□□□ -1.13
ATG3-202ENST00000402314 FAT1Q14517 4588 aa7.98□□□□□ -1.13
ATG3-202ENST00000402314 FAM229AH3BQW9 127 aa7.97□□□□□ -1.13
ATG3-202ENST00000402314 SMR3BP02814 79 aaPredicted RBP7.95□□□□□ -1.14
ATG3-202ENST00000402314 DMBT1Q9UGM3 2413 aaPredicted RBP7.94□□□□□ -1.14
ATG3-202ENST00000402314 DYNC1H1Q14204 4646 aaKnown RBP7.94□□□□□ -1.14
ATG3-202ENST00000402314 CRIPTQ9P021 101 aa7.9□□□□□ -1.14
ATG3-202ENST00000402314 TYMSOSQ8TAI1 123 aa7.9□□□□□ -1.14
ATG3-202ENST00000402314 KRTAP16-1A8MUX0 517 aa7.88□□□□□ -1.15
ATG3-202ENST00000402314 KMT2CQ8NEZ4 4911 aaKnown RBP7.79□□□□□ -1.16
ATG3-202ENST00000402314 APOBP04114 4563 aaKnown RBP7.78□□□□□ -1.16
ATG3-202ENST00000402314 LINC00304Q8N9R0 145 aa7.77□□□□□ -1.17
ATG3-202ENST00000402314 H0YAA0 97 aa7.75□□□□□ -1.17
ATG3-202ENST00000402314 C9orf92A6NGG3 77 aa7.75□□□□□ -1.17
ATG3-202ENST00000402314 RYR2Q92736 4967 aa7.72□□□□□ -1.17
ATG3-202ENST00000402314 LRP1Q07954 4544 aaKnown RBP7.68□□□□□ -1.18
ATG3-202ENST00000402314 A0A1B0GVY2 172 aa7.65□□□□□ -1.18
ATG3-202ENST00000402314 A8MUU9 505 aa7.65□□□□□ -1.18
ATG3-202ENST00000402314 A0A1B0GU33 70 aa7.65□□□□□ -1.19
ATG3-202ENST00000402314 KRTAP10-4P60372 401 aaPredicted RBP7.65□□□□□ -1.19
ATG3-202ENST00000402314 KRTAP25-1Q3LHN0 102 aa7.64□□□□□ -1.19
ATG3-202ENST00000402314 PKHD1L1Q86WI1 4243 aa7.62□□□□□ -1.19
ATG3-202ENST00000402314 KRTAP21-3Q3LHN1 58 aa7.62□□□□□ -1.19
ATG3-202ENST00000402314 ROMO1P60602 79 aa7.59□□□□□ -1.19
ATG3-202ENST00000402314 MYCBP2O75592 4640 aa7.59□□□□□ -1.19
ATG3-202ENST00000402314 KRTAP3-1Q9BYR8 98 aa7.56□□□□□ -1.2
ATG3-202ENST00000402314 H1FX-AS1Q4G0G2 97 aa7.54□□□□□ -1.2
ATG3-202ENST00000402314 RPS29P62273 56 aaKnown RBP7.54□□□□□ -1.2
ATG3-202ENST00000402314 A0A0D9SG42 100 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms