RNA–Protein interactions for RNA: ENST00000402255.5

APOBEC3A-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene APOBEC3A, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-202ENST00000402255 C21orf62-AS1Q17RA5 79 aa8.52□□□□□ -1.05
APOBEC3A-202ENST00000402255 KRTAP4-12Q9BQ66 201 aa8.51□□□□□ -1.05
APOBEC3A-202ENST00000402255 MUC17Q685J3 4493 aa8.51□□□□□ -1.05
APOBEC3A-202ENST00000402255 C9orf92A6NGG3 77 aa8.51□□□□□ -1.05
APOBEC3A-202ENST00000402255 DEFB116Q30KQ4 102 aa8.51□□□□□ -1.05
APOBEC3A-202ENST00000402255 LCE3BQ5TA77 95 aa8.49□□□□□ -1.05
APOBEC3A-202ENST00000402255 IGKV4-1P06312 121 aa8.47□□□□□ -1.05
APOBEC3A-202ENST00000402255 SEC61BP60468 96 aaKnown RBP8.47□□□□□ -1.05
APOBEC3A-202ENST00000402255 SIGMAR1Q99720 223 aa8.46□□□□□ -1.05
APOBEC3A-202ENST00000402255 NREPQ16612 68 aa8.43□□□□□ -1.06
APOBEC3A-202ENST00000402255 LINC00846Q9NV44 126 aa8.42□□□□□ -1.06
APOBEC3A-202ENST00000402255 RNF213Q63HN8 5207 aa8.42□□□□□ -1.06
APOBEC3A-202ENST00000402255 Q6ZVQ6 151 aa8.4□□□□□ -1.06
APOBEC3A-202ENST00000402255 J3KT08 172 aa8.39□□□□□ -1.07
APOBEC3A-202ENST00000402255 DSCR10P59022 87 aa8.38□□□□□ -1.07
APOBEC3A-202ENST00000402255 A0A0U1RQV1 116 aa8.37□□□□□ -1.07
APOBEC3A-202ENST00000402255 NOTCH2NLQ7Z3S9 236 aa8.37□□□□□ -1.07
APOBEC3A-202ENST00000402255 A0A1B0GVX0 72 aa8.36□□□□□ -1.07
APOBEC3A-202ENST00000402255 IGHV6-1A0A0B4J1U7 121 aa8.35□□□□□ -1.07
APOBEC3A-202ENST00000402255 A8MWP4 228 aa8.35□□□□□ -1.07
APOBEC3A-202ENST00000402255 KRTAP19-1Q8IUB9 90 aa8.35□□□□□ -1.07
APOBEC3A-202ENST00000402255 IGKV3D-7A0A0C4DH55 119 aa8.34□□□□□ -1.07
APOBEC3A-202ENST00000402255 RPL37P61927 97 aaKnown RBP8.34□□□□□ -1.07
APOBEC3A-202ENST00000402255 KRTAP9-9Q9BYP9 154 aa8.34□□□□□ -1.07
APOBEC3A-202ENST00000402255 KRTAP9-4Q9BYQ2 154 aa8.34□□□□□ -1.07
APOBEC3A-202ENST00000402255 LINC00313P59037 77 aa8.32□□□□□ -1.08
APOBEC3A-202ENST00000402255 PCOTHQ58A44 107 aa8.32□□□□□ -1.08
APOBEC3A-202ENST00000402255 UBL5Q9BZL1 73 aa8.32□□□□□ -1.08
APOBEC3A-202ENST00000402255 KRTAP16-1A8MUX0 517 aa8.32□□□□□ -1.08
APOBEC3A-202ENST00000402255 BPY2O14599 106 aa8.32□□□□□ -1.08
APOBEC3A-202ENST00000402255 FAM240AA0A1B0GVK7 77 aa8.3□□□□□ -1.08
APOBEC3A-202ENST00000402255 K7EQZ3 153 aa8.3□□□□□ -1.08
APOBEC3A-202ENST00000402255 C8orf87E5RJ46 101 aa8.29□□□□□ -1.08
APOBEC3A-202ENST00000402255 NDUFB1O75438 58 aa8.29□□□□□ -1.08
APOBEC3A-202ENST00000402255 Q75L30 129 aa8.29□□□□□ -1.08
APOBEC3A-202ENST00000402255 PRR15Q8IV56 129 aa8.29□□□□□ -1.08
APOBEC3A-202ENST00000402255 MUC2Q02817 5179 aa8.29□□□□□ -1.08
APOBEC3A-202ENST00000402255 ACYP1P07311 99 aa8.28□□□□□ -1.08
APOBEC3A-202ENST00000402255 Q8N9L7 120 aa8.26□□□□□ -1.09
APOBEC3A-202ENST00000402255 C20orf166-AS1Q96NR2 134 aa8.26□□□□□ -1.09
APOBEC3A-202ENST00000402255 A8MUU9 505 aa8.26□□□□□ -1.09
APOBEC3A-202ENST00000402255 ATP11AUNQ6ZP68 121 aa8.26□□□□□ -1.09
APOBEC3A-202ENST00000402255 C8orf17Q9NRJ1 99 aa8.26□□□□□ -1.09
APOBEC3A-202ENST00000402255 KRTAP4-1Q9BYQ7 146 aa8.24□□□□□ -1.09
APOBEC3A-202ENST00000402255 MMP24-AS1A0A0U1RRL7 71 aa8.23□□□□□ -1.09
APOBEC3A-202ENST00000402255 KRTAP4-8A0A0G2JLE6 195 aa8.21□□□□□ -1.09
APOBEC3A-202ENST00000402255 CXCL6P80162 114 aa8.2□□□□□ -1.1
APOBEC3A-202ENST00000402255 J3QR89 54 aa8.18□□□□□ -1.1
APOBEC3A-202ENST00000402255 Q8N9P0 234 aaPredicted RBP8.16□□□□□ -1.1
APOBEC3A-202ENST00000402255 TMEM254Q8TBM7 123 aa8.16□□□□□ -1.1
APOBEC3A-202ENST00000402255 hDV103S1A0JD37 113 aa8.15□□□□□ -1.1
APOBEC3A-202ENST00000402255 WFDC13Q8IUB5 93 aa8.14□□□□□ -1.11
APOBEC3A-202ENST00000402255 MRPL34Q9BQ48 92 aaKnown RBP8.14□□□□□ -1.11
APOBEC3A-202ENST00000402255 ATP5EP2Q5VTU8 51 aa8.13□□□□□ -1.11
APOBEC3A-202ENST00000402255 LINC00643Q86TS7 51 aa8.13□□□□□ -1.11
APOBEC3A-202ENST00000402255 HCG22E2RYF7 251 aa8.11□□□□□ -1.11
APOBEC3A-202ENST00000402255 CASC2Q6XLA1 102 aa8.11□□□□□ -1.11
APOBEC3A-202ENST00000402255 K7ERU9 68 aa8.07□□□□□ -1.12
APOBEC3A-202ENST00000402255 FAT4Q6V0I7 4981 aa8.07□□□□□ -1.12
APOBEC3A-202ENST00000402255 ZCCHC13Q8WW36 166 aaKnown RBP8.06□□□□□ -1.12
APOBEC3A-202ENST00000402255 NDUFS5O43920 106 aa8.04□□□□□ -1.12
APOBEC3A-202ENST00000402255 HIST1H4AP62805 103 aaKnown RBP8.04□□□□□ -1.12
APOBEC3A-202ENST00000402255 A0A087WVE0 104 aa8.01□□□□□ -1.13
APOBEC3A-202ENST00000402255 COX6B2Q6YFQ2 88 aa8.01□□□□□ -1.13
APOBEC3A-202ENST00000402255 KRTAP19-2Q3LHN2 52 aa8□□□□□ -1.13
APOBEC3A-202ENST00000402255 Q5W150 140 aa7.98□□□□□ -1.13
APOBEC3A-202ENST00000402255 MT-ATP8P03928 68 aa7.94□□□□□ -1.14
APOBEC3A-202ENST00000402255 LCE1DQ5T752 114 aa7.94□□□□□ -1.14
APOBEC3A-202ENST00000402255 KRTAP4-7Q9BYR0 210 aa7.93□□□□□ -1.14
APOBEC3A-202ENST00000402255 SPINK7P58062 85 aa7.92□□□□□ -1.14
APOBEC3A-202ENST00000402255 HRES1P13985 223 aa7.9□□□□□ -1.14
APOBEC3A-202ENST00000402255 MT1HP80294 61 aa7.9□□□□□ -1.14
APOBEC3A-202ENST00000402255 TP53AIP1Q9HCN2 124 aa7.9□□□□□ -1.14
APOBEC3A-202ENST00000402255 RBM12B-AS1Q9P1G2 102 aa7.89□□□□□ -1.15
APOBEC3A-202ENST00000402255 IMUPQ9GZP8 106 aa7.87□□□□□ -1.15
APOBEC3A-202ENST00000402255 FAM236DA0A1B0GTK5 79 aa7.86□□□□□ -1.15
APOBEC3A-202ENST00000402255 FAM236CP0DP71 79 aa7.86□□□□□ -1.15
APOBEC3A-202ENST00000402255 FLGP20930 4061 aaPredicted RBP7.86□□□□□ -1.15
APOBEC3A-202ENST00000402255 MPLKIPQ8TAP9 179 aa7.85□□□□□ -1.15
APOBEC3A-202ENST00000402255 IGKV2D-30A0A075B6S6 120 aa7.84□□□□□ -1.15
APOBEC3A-202ENST00000402255 M0R2T5 61 aa7.84□□□□□ -1.15
APOBEC3A-202ENST00000402255 IGKV2-30P06310 120 aa7.84□□□□□ -1.15
APOBEC3A-202ENST00000402255 C7orf65Q6ZTY9 151 aa7.81□□□□□ -1.16
APOBEC3A-202ENST00000402255 OCR1Q9BZK8 76 aa7.81□□□□□ -1.16
APOBEC3A-202ENST00000402255 UQCRQO14949 82 aa7.8□□□□□ -1.16
APOBEC3A-202ENST00000402255 TRAV22A0A0B4J277 110 aa7.79□□□□□ -1.16
APOBEC3A-202ENST00000402255 FAM236AA0A1B0GUQ0 79 aa7.75□□□□□ -1.17
APOBEC3A-202ENST00000402255 FAM236BA0A1B0GV22 79 aa7.75□□□□□ -1.17
APOBEC3A-202ENST00000402255 H0Y9P7 68 aa7.75□□□□□ -1.17
APOBEC3A-202ENST00000402255 SCGB1A1P11684 91 aa7.74□□□□□ -1.17
APOBEC3A-202ENST00000402255 KRTAP4-9Q9BYQ8 210 aa7.73□□□□□ -1.17
APOBEC3A-202ENST00000402255 LOC101927531A0A1B0GV80 90 aa7.7□□□□□ -1.18
APOBEC3A-202ENST00000402255 KRTAP10-6P60371 365 aaPredicted RBP7.7□□□□□ -1.18
APOBEC3A-202ENST00000402255 CYP4F30PQ9H0H9 118 aa7.7□□□□□ -1.18
APOBEC3A-202ENST00000402255 ATOX1O00244 68 aa7.69□□□□□ -1.18
APOBEC3A-202ENST00000402255 C4orf26Q17RF5 130 aa7.67□□□□□ -1.18
APOBEC3A-202ENST00000402255 C5orf47Q569G3 176 aa7.66□□□□□ -1.18
APOBEC3A-202ENST00000402255 MP68P56378 58 aa7.65□□□□□ -1.18
APOBEC3A-202ENST00000402255 C1orf64Q8NEQ6 169 aa7.65□□□□□ -1.18
APOBEC3A-202ENST00000402255 LINC00208Q96KT6 92 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms