RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 ZCCHC13Q8WW36 166 aaKnown RBP7.08□□□□□ -1.28
CLIP4-203ENST00000401617 IGHV6-1A0A0B4J1U7 121 aa7.07□□□□□ -1.28
CLIP4-203ENST00000401617 PKHD1L1Q86WI1 4243 aa7.06□□□□□ -1.28
CLIP4-203ENST00000401617 C1orf195Q5TG92 126 aa7.05□□□□□ -1.28
CLIP4-203ENST00000401617 TYMSOSQ8TAI1 123 aa7.05□□□□□ -1.28
CLIP4-203ENST00000401617 NOTCH2NLQ7Z3S9 236 aa7.05□□□□□ -1.28
CLIP4-203ENST00000401617 LIMD2Q9BT23 127 aa7.03□□□□□ -1.28
CLIP4-203ENST00000401617 FAM236DA0A1B0GTK5 79 aa7.02□□□□□ -1.29
CLIP4-203ENST00000401617 SPINK1P00995 79 aa7.02□□□□□ -1.29
CLIP4-203ENST00000401617 FAM236CP0DP71 79 aa7.02□□□□□ -1.29
CLIP4-203ENST00000401617 RPS28P62857 69 aaKnown RBP7.02□□□□□ -1.29
CLIP4-203ENST00000401617 PRR26Q8N8Z3 221 aa7.02□□□□□ -1.29
CLIP4-203ENST00000401617 MRPL34Q9BQ48 92 aaKnown RBP7.02□□□□□ -1.29
CLIP4-203ENST00000401617 TP53AIP1Q9HCN2 124 aa7.02□□□□□ -1.29
CLIP4-203ENST00000401617 RYR3Q15413 4870 aa7.02□□□□□ -1.29
CLIP4-203ENST00000401617 C8orf87E5RJ46 101 aa7.01□□□□□ -1.29
CLIP4-203ENST00000401617 H3BPC8 53 aa7.01□□□□□ -1.29
CLIP4-203ENST00000401617 MP68P56378 58 aa7.01□□□□□ -1.29
CLIP4-203ENST00000401617 C4orf48Q5BLP8 95 aa7.01□□□□□ -1.29
CLIP4-203ENST00000401617 RPS29P62273 56 aaKnown RBP7□□□□□ -1.29
CLIP4-203ENST00000401617 H0Y9P7 68 aa6.99□□□□□ -1.29
CLIP4-203ENST00000401617 ATP5EP56381 51 aaPredicted RBP6.98□□□□□ -1.29
CLIP4-203ENST00000401617 TRAV22A0A0B4J277 110 aa6.98□□□□□ -1.29
CLIP4-203ENST00000401617 SPAG11AQ6PDA7 123 aa6.98□□□□□ -1.29
CLIP4-203ENST00000401617 LINC00304Q8N9R0 145 aa6.98□□□□□ -1.29
CLIP4-203ENST00000401617 LINC00208Q96KT6 92 aa6.97□□□□□ -1.29
CLIP4-203ENST00000401617 HSPG2P98160 4391 aa6.96□□□□□ -1.29
CLIP4-203ENST00000401617 LINC00313P59037 77 aa6.95□□□□□ -1.3
CLIP4-203ENST00000401617 NDUFS5O43920 106 aa6.93□□□□□ -1.3
CLIP4-203ENST00000401617 OXTP01178 125 aa6.93□□□□□ -1.3
CLIP4-203ENST00000401617 C1orf64Q8NEQ6 169 aa6.93□□□□□ -1.3
CLIP4-203ENST00000401617 SERP1Q9Y6X1 66 aa6.93□□□□□ -1.3
CLIP4-203ENST00000401617 RYR1P21817 5038 aa6.92□□□□□ -1.3
CLIP4-203ENST00000401617 KRTAP16-1A8MUX0 517 aa6.92□□□□□ -1.3
CLIP4-203ENST00000401617 FAM229AH3BQW9 127 aa6.92□□□□□ -1.3
CLIP4-203ENST00000401617 Q8N9P0 234 aaPredicted RBP6.92□□□□□ -1.3
CLIP4-203ENST00000401617 KRTAP13-3Q3SY46 172 aa6.91□□□□□ -1.3
CLIP4-203ENST00000401617 Q5W150 140 aa6.88□□□□□ -1.31
CLIP4-203ENST00000401617 SPANXA2-OT1Q8N9U9 137 aa6.87□□□□□ -1.31
CLIP4-203ENST00000401617 CYP4F30PQ9H0H9 118 aa6.87□□□□□ -1.31
CLIP4-203ENST00000401617 Q5VSD8 79 aa6.86□□□□□ -1.31
CLIP4-203ENST00000401617 TNXBP22105 4242 aa6.86□□□□□ -1.31
CLIP4-203ENST00000401617 FLG2Q5D862 2391 aaPredicted RBP6.84□□□□□ -1.32
CLIP4-203ENST00000401617 KRTAP17-1Q9BYP8 105 aa6.84□□□□□ -1.32
CLIP4-203ENST00000401617 KRTAP10-8P60410 259 aa6.83□□□□□ -1.32
CLIP4-203ENST00000401617 LOC101927531A0A1B0GV80 90 aa6.82□□□□□ -1.32
CLIP4-203ENST00000401617 LRP1Q07954 4544 aaKnown RBP6.81□□□□□ -1.32
CLIP4-203ENST00000401617 IGLV7-46A0A075B6I9 117 aa6.81□□□□□ -1.32
CLIP4-203ENST00000401617 FAT3Q8TDW7 4589 aa6.8□□□□□ -1.32
CLIP4-203ENST00000401617 PRR4Q16378 134 aa6.78□□□□□ -1.32
CLIP4-203ENST00000401617 PCOTHQ58A44 107 aa6.78□□□□□ -1.32
CLIP4-203ENST00000401617 Q8N1X5 172 aa6.78□□□□□ -1.32
CLIP4-203ENST00000401617 KIAA1109Q2LD37 5005 aa6.78□□□□□ -1.32
CLIP4-203ENST00000401617 SMIM26A0A096LP01 95 aa6.77□□□□□ -1.33
CLIP4-203ENST00000401617 IGKV2-30P06310 120 aa6.75□□□□□ -1.33
CLIP4-203ENST00000401617 EPPK1P58107 5090 aaKnown RBP6.75□□□□□ -1.33
CLIP4-203ENST00000401617 FP248Q71RG6 208 aaPredicted RBP6.74□□□□□ -1.33
CLIP4-203ENST00000401617 RETNLBQ9BQ08 111 aa6.73□□□□□ -1.33
CLIP4-203ENST00000401617 C20orf166-AS1Q96NR2 134 aa6.72□□□□□ -1.33
CLIP4-203ENST00000401617 A8MUU9 505 aa6.71□□□□□ -1.33
CLIP4-203ENST00000401617 DMBT1Q9UGM3 2413 aaPredicted RBP6.69□□□□□ -1.34
CLIP4-203ENST00000401617 C9orf92A6NGG3 77 aa6.68□□□□□ -1.34
CLIP4-203ENST00000401617 MT1HL1P0DM35 61 aa6.68□□□□□ -1.34
CLIP4-203ENST00000401617 HRES1P13985 223 aa6.67□□□□□ -1.34
CLIP4-203ENST00000401617 C4orf26Q17RF5 130 aa6.65□□□□□ -1.34
CLIP4-203ENST00000401617 COA5Q86WW8 74 aa6.65□□□□□ -1.34
CLIP4-203ENST00000401617 MYCBP2O75592 4640 aa6.64□□□□□ -1.35
CLIP4-203ENST00000401617 IGKV2D-30A0A075B6S6 120 aa6.63□□□□□ -1.35
CLIP4-203ENST00000401617 Q1T7F1 81 aa6.62□□□□□ -1.35
CLIP4-203ENST00000401617 Q75L30 129 aa6.62□□□□□ -1.35
CLIP4-203ENST00000401617 DMAC1Q96GE9 116 aa6.62□□□□□ -1.35
CLIP4-203ENST00000401617 PRO0628Q9UI54 55 aa6.62□□□□□ -1.35
CLIP4-203ENST00000401617 C7orf65Q6ZTY9 151 aa6.61□□□□□ -1.35
CLIP4-203ENST00000401617 MPLKIPQ8TAP9 179 aa6.59□□□□□ -1.35
CLIP4-203ENST00000401617 ACYP2P14621 99 aa6.58□□□□□ -1.36
CLIP4-203ENST00000401617 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
CLIP4-203ENST00000401617 V9GYY9 64 aa6.54□□□□□ -1.36
CLIP4-203ENST00000401617 SEC61GP60059 68 aa6.52□□□□□ -1.37
CLIP4-203ENST00000401617 XP32Q5T750 250 aa6.51□□□□□ -1.37
CLIP4-203ENST00000401617 RPL37P61927 97 aaKnown RBP6.51□□□□□ -1.37
CLIP4-203ENST00000401617 SPINK7P58062 85 aa6.5□□□□□ -1.37
CLIP4-203ENST00000401617 A8MUN3 132 aa6.48□□□□□ -1.37
CLIP4-203ENST00000401617 ATP11AUNQ6ZP68 121 aa6.47□□□□□ -1.37
CLIP4-203ENST00000401617 LINC01558Q9Y6Z2 57 aa6.47□□□□□ -1.37
CLIP4-203ENST00000401617 BIRC6Q9NR09 4857 aa6.47□□□□□ -1.37
CLIP4-203ENST00000401617 CHKB-CPT1BH3BT56 60 aa6.44□□□□□ -1.38
CLIP4-203ENST00000401617 PSPHP1O15172 72 aa6.44□□□□□ -1.38
CLIP4-203ENST00000401617 HERC2O95714 4834 aa6.44□□□□□ -1.38
CLIP4-203ENST00000401617 TPRXLQ17RH7 258 aa6.44□□□□□ -1.38
CLIP4-203ENST00000401617 Q5VV11 94 aa6.43□□□□□ -1.38
CLIP4-203ENST00000401617 ABCA13Q86UQ4 5058 aa6.43□□□□□ -1.38
CLIP4-203ENST00000401617 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
CLIP4-203ENST00000401617 PRR15LQ9BU68 103 aa6.4□□□□□ -1.38
CLIP4-203ENST00000401617 COX6B2Q6YFQ2 88 aa6.38□□□□□ -1.39
CLIP4-203ENST00000401617 LCE2DQ5TA82 110 aaPredicted RBP6.36□□□□□ -1.39
CLIP4-203ENST00000401617 LRP2P98164 4655 aa6.34□□□□□ -1.39
CLIP4-203ENST00000401617 J3QL48 77 aa6.31□□□□□ -1.4
CLIP4-203ENST00000401617 BRK1Q8WUW1 75 aa6.31□□□□□ -1.4
CLIP4-203ENST00000401617 LPAP08519 4548 aa6.3□□□□□ -1.4
CLIP4-203ENST00000401617 SPTSSBQ8NFR3 76 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms