RNA–Protein interactions for RNA: ENST00000400814.3

PRAMEF1-202, Transcript of PRAME family member 1, humanhuman

TSL 1 (best)

Gene PRAMEF1, Length 1,327 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-202ENST00000400814 KIAA1109Q2LD37 5005 aa5.62□□□□□ -1.51
PRAMEF1-202ENST00000400814 MOBPQ13875 183 aa5.62□□□□□ -1.51
PRAMEF1-202ENST00000400814 C9orf153Q5TBE3 101 aa5.62□□□□□ -1.51
PRAMEF1-202ENST00000400814 VPS25Q9BRG1 176 aa5.6□□□□□ -1.51
PRAMEF1-202ENST00000400814 LINC00846Q9NV44 126 aa5.6□□□□□ -1.51
PRAMEF1-202ENST00000400814 CD164Q04900 197 aa5.58□□□□□ -1.52
PRAMEF1-202ENST00000400814 KRTAP4-5Q9BYR2 181 aa5.57□□□□□ -1.52
PRAMEF1-202ENST00000400814 TRBV7-7A0A0K0K1E9 115 aa5.56□□□□□ -1.52
PRAMEF1-202ENST00000400814 TYMSOSQ8TAI1 123 aa5.56□□□□□ -1.52
PRAMEF1-202ENST00000400814 KRTAP4-2Q9BYR5 136 aa5.56□□□□□ -1.52
PRAMEF1-202ENST00000400814 A0A087WSZ3 146 aa5.54□□□□□ -1.52
PRAMEF1-202ENST00000400814 KRTAP10-8P60410 259 aa5.54□□□□□ -1.52
PRAMEF1-202ENST00000400814 UBL5Q9BZL1 73 aa5.54□□□□□ -1.52
PRAMEF1-202ENST00000400814 NREPQ16612 68 aa5.53□□□□□ -1.52
PRAMEF1-202ENST00000400814 HRCT1Q6UXD1 115 aa5.53□□□□□ -1.52
PRAMEF1-202ENST00000400814 BIRC6Q9NR09 4857 aa5.53□□□□□ -1.52
PRAMEF1-202ENST00000400814 Q5XG85 94 aa5.52□□□□□ -1.53
PRAMEF1-202ENST00000400814 LINC00643Q86TS7 51 aa5.52□□□□□ -1.53
PRAMEF1-202ENST00000400814 SPAG11AQ6PDA7 123 aa5.51□□□□□ -1.53
PRAMEF1-202ENST00000400814 SPINK1P00995 79 aa5.5□□□□□ -1.53
PRAMEF1-202ENST00000400814 MT3P25713 68 aa5.5□□□□□ -1.53
PRAMEF1-202ENST00000400814 SS18L2Q9UHA2 77 aa5.5□□□□□ -1.53
PRAMEF1-202ENST00000400814 RPS29P62273 56 aaKnown RBP5.49□□□□□ -1.53
PRAMEF1-202ENST00000400814 ASB16-AS1Q495Z4 193 aa5.49□□□□□ -1.53
PRAMEF1-202ENST00000400814 LINC00304Q8N9R0 145 aa5.49□□□□□ -1.53
PRAMEF1-202ENST00000400814 LINC00472Q9H8W2 130 aa5.49□□□□□ -1.53
PRAMEF1-202ENST00000400814 Q96NJ1 140 aa5.48□□□□□ -1.53
PRAMEF1-202ENST00000400814 OXTP01178 125 aa5.48□□□□□ -1.53
PRAMEF1-202ENST00000400814 MT-ATP8P03928 68 aa5.48□□□□□ -1.53
PRAMEF1-202ENST00000400814 ATP5EP2Q5VTU8 51 aa5.48□□□□□ -1.53
PRAMEF1-202ENST00000400814 MT1HL1P0DM35 61 aa5.47□□□□□ -1.53
PRAMEF1-202ENST00000400814 SIGMAR1Q99720 223 aa5.47□□□□□ -1.53
PRAMEF1-202ENST00000400814 BPY2O14599 106 aa5.46□□□□□ -1.54
PRAMEF1-202ENST00000400814 LIMD2Q9BT23 127 aa5.46□□□□□ -1.54
PRAMEF1-202ENST00000400814 FLG2Q5D862 2391 aaPredicted RBP5.46□□□□□ -1.54
PRAMEF1-202ENST00000400814 HERC2O95714 4834 aa5.45□□□□□ -1.54
PRAMEF1-202ENST00000400814 IGKV3D-7A0A0C4DH55 119 aa5.45□□□□□ -1.54
PRAMEF1-202ENST00000400814 J3KT08 172 aa5.45□□□□□ -1.54
PRAMEF1-202ENST00000400814 DSCR10P59022 87 aa5.45□□□□□ -1.54
PRAMEF1-202ENST00000400814 FAT3Q8TDW7 4589 aa5.44□□□□□ -1.54
PRAMEF1-202ENST00000400814 DEFB116Q30KQ4 102 aa5.44□□□□□ -1.54
PRAMEF1-202ENST00000400814 IMUPQ9GZP8 106 aa5.44□□□□□ -1.54
PRAMEF1-202ENST00000400814 LRP1Q07954 4544 aaKnown RBP5.43□□□□□ -1.54
PRAMEF1-202ENST00000400814 TNXBP22105 4242 aa5.43□□□□□ -1.54
PRAMEF1-202ENST00000400814 C1orf195Q5TG92 126 aa5.43□□□□□ -1.54
PRAMEF1-202ENST00000400814 IGKV4-1P06312 121 aa5.42□□□□□ -1.54
PRAMEF1-202ENST00000400814 A8MWP4 228 aa5.4□□□□□ -1.55
PRAMEF1-202ENST00000400814 K7EQZ3 153 aa5.39□□□□□ -1.55
PRAMEF1-202ENST00000400814 PRR15Q8IV56 129 aa5.39□□□□□ -1.55
PRAMEF1-202ENST00000400814 Q8N9L7 120 aa5.39□□□□□ -1.55
PRAMEF1-202ENST00000400814 NDUFB1O75438 58 aa5.37□□□□□ -1.55
PRAMEF1-202ENST00000400814 HIST1H4AP62805 103 aaKnown RBP5.37□□□□□ -1.55
PRAMEF1-202ENST00000400814 DMBT1Q9UGM3 2413 aaPredicted RBP5.36□□□□□ -1.55
PRAMEF1-202ENST00000400814 ABCA13Q86UQ4 5058 aa5.36□□□□□ -1.55
PRAMEF1-202ENST00000400814 A0A087WVE0 104 aa5.36□□□□□ -1.55
PRAMEF1-202ENST00000400814 A0A1B0GVX0 72 aa5.36□□□□□ -1.55
PRAMEF1-202ENST00000400814 MYCBP2O75592 4640 aa5.35□□□□□ -1.55
PRAMEF1-202ENST00000400814 IGHV6-1A0A0B4J1U7 121 aa5.32□□□□□ -1.56
PRAMEF1-202ENST00000400814 MMP24-AS1A0A0U1RRL7 71 aa5.32□□□□□ -1.56
PRAMEF1-202ENST00000400814 SCGB1A1P11684 91 aa5.32□□□□□ -1.56
PRAMEF1-202ENST00000400814 C8orf17Q9NRJ1 99 aa5.32□□□□□ -1.56
PRAMEF1-202ENST00000400814 HCG22E2RYF7 251 aa5.31□□□□□ -1.56
PRAMEF1-202ENST00000400814 C8orf87E5RJ46 101 aa5.31□□□□□ -1.56
PRAMEF1-202ENST00000400814 FP248Q71RG6 208 aaPredicted RBP5.31□□□□□ -1.56
PRAMEF1-202ENST00000400814 RETNLBQ9BQ08 111 aa5.31□□□□□ -1.56
PRAMEF1-202ENST00000400814 LINC00313P59037 77 aa5.3□□□□□ -1.56
PRAMEF1-202ENST00000400814 FAM236AA0A1B0GUQ0 79 aa5.29□□□□□ -1.56
PRAMEF1-202ENST00000400814 FAM236BA0A1B0GV22 79 aa5.29□□□□□ -1.56
PRAMEF1-202ENST00000400814 KRTAP9-8Q9BYQ0 159 aa5.29□□□□□ -1.56
PRAMEF1-202ENST00000400814 hDV103S1A0JD37 113 aa5.28□□□□□ -1.56
PRAMEF1-202ENST00000400814 CASC2Q6XLA1 102 aa5.28□□□□□ -1.56
PRAMEF1-202ENST00000400814 WFDC13Q8IUB5 93 aa5.27□□□□□ -1.57
PRAMEF1-202ENST00000400814 TMEM254Q8TBM7 123 aa5.27□□□□□ -1.57
PRAMEF1-202ENST00000400814 MRPL34Q9BQ48 92 aaKnown RBP5.25□□□□□ -1.57
PRAMEF1-202ENST00000400814 ATOX1O00244 68 aa5.24□□□□□ -1.57
PRAMEF1-202ENST00000400814 PCLOQ9Y6V0 5065 aa5.23□□□□□ -1.57
PRAMEF1-202ENST00000400814 SMIM20Q8N5G0 67 aa5.23□□□□□ -1.57
PRAMEF1-202ENST00000400814 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
PRAMEF1-202ENST00000400814 C9orf92A6NGG3 77 aa5.22□□□□□ -1.57
PRAMEF1-202ENST00000400814 KRTAP13-3Q3SY46 172 aa5.22□□□□□ -1.57
PRAMEF1-202ENST00000400814 TRAV7A0A075B6U4 112 aa5.2□□□□□ -1.58
PRAMEF1-202ENST00000400814 TP53AIP1Q9HCN2 124 aa5.2□□□□□ -1.58
PRAMEF1-202ENST00000400814 A8MUU9 505 aa5.19□□□□□ -1.58
PRAMEF1-202ENST00000400814 TPRXLQ17RH7 258 aa5.19□□□□□ -1.58
PRAMEF1-202ENST00000400814 SERP2Q8N6R1 65 aa5.19□□□□□ -1.58
PRAMEF1-202ENST00000400814 C20orf166-AS1Q96NR2 134 aa5.19□□□□□ -1.58
PRAMEF1-202ENST00000400814 UQCRQO14949 82 aa5.18□□□□□ -1.58
PRAMEF1-202ENST00000400814 ANAPC13Q9BS18 74 aa5.18□□□□□ -1.58
PRAMEF1-202ENST00000400814 NDUFS5O43920 106 aa5.17□□□□□ -1.58
PRAMEF1-202ENST00000400814 COX7CP15954 63 aa5.16□□□□□ -1.58
PRAMEF1-202ENST00000400814 C5orf47Q569G3 176 aa5.15□□□□□ -1.59
PRAMEF1-202ENST00000400814 Q5W150 140 aa5.14□□□□□ -1.59
PRAMEF1-202ENST00000400814 CAMK2N1Q7Z7J9 78 aa5.14□□□□□ -1.59
PRAMEF1-202ENST00000400814 RPL37P61927 97 aaKnown RBP5.12□□□□□ -1.59
PRAMEF1-202ENST00000400814 TRAV22A0A0B4J277 110 aa5.11□□□□□ -1.59
PRAMEF1-202ENST00000400814 ZCCHC13Q8WW36 166 aaKnown RBP5.11□□□□□ -1.59
PRAMEF1-202ENST00000400814 H0Y9P7 68 aa5.1□□□□□ -1.59
PRAMEF1-202ENST00000400814 H3BPC8 53 aa5.1□□□□□ -1.59
PRAMEF1-202ENST00000400814 V9GYY9 64 aa5.1□□□□□ -1.59
PRAMEF1-202ENST00000400814 MP68P56378 58 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms