RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 CEND1Q8N111 149 aa5.7□□□□□ -1.5
LINC00544-201ENST00000400540 ORMDL1Q9P0S3 153 aa5.7□□□□□ -1.5
LINC00544-201ENST00000400540 PAM16Q9Y3D7 125 aa5.7□□□□□ -1.5
LINC00544-201ENST00000400540 A8MWP4 228 aa5.69□□□□□ -1.5
LINC00544-201ENST00000400540 C8orf87E5RJ46 101 aa5.69□□□□□ -1.5
LINC00544-201ENST00000400540 S100A6P06703 90 aa5.69□□□□□ -1.5
LINC00544-201ENST00000400540 FXYD2P54710 66 aa5.69□□□□□ -1.5
LINC00544-201ENST00000400540 KRTAP6-3Q3LI67 103 aa5.69□□□□□ -1.5
LINC00544-201ENST00000400540 DNAL4O96015 105 aa5.68□□□□□ -1.5
LINC00544-201ENST00000400540 SPATA45Q537H7 98 aa5.68□□□□□ -1.5
LINC00544-201ENST00000400540 NEBP20929 6669 aa5.68□□□□□ -1.5
LINC00544-201ENST00000400540 WFDC13Q8IUB5 93 aa5.66□□□□□ -1.5
LINC00544-201ENST00000400540 VPS25Q9BRG1 176 aa5.66□□□□□ -1.5
LINC00544-201ENST00000400540 TMEM256-PLSCR3K7ERE1 68 aa5.65□□□□□ -1.5
LINC00544-201ENST00000400540 K7ERJ3 54 aa5.64□□□□□ -1.51
LINC00544-201ENST00000400540 MUC12Q9UKN1 5478 aa5.64□□□□□ -1.51
LINC00544-201ENST00000400540 PSMB2P49721 201 aa5.63□□□□□ -1.51
LINC00544-201ENST00000400540 H3BQ85 93 aa5.62□□□□□ -1.51
LINC00544-201ENST00000400540 VAMP8Q9BV40 100 aa5.62□□□□□ -1.51
LINC00544-201ENST00000400540 UBE2V1Q13404 147 aa5.61□□□□□ -1.51
LINC00544-201ENST00000400540 J3KT08 172 aa5.58□□□□□ -1.52
LINC00544-201ENST00000400540 RBM3P98179 157 aaKnown RBP5.58□□□□□ -1.52
LINC00544-201ENST00000400540 LYRM7Q5U5X0 104 aa5.58□□□□□ -1.52
LINC00544-201ENST00000400540 C8orf17Q9NRJ1 99 aa5.57□□□□□ -1.52
LINC00544-201ENST00000400540 COX6CP09669 75 aa5.56□□□□□ -1.52
LINC00544-201ENST00000400540 S100A1P23297 94 aa5.56□□□□□ -1.52
LINC00544-201ENST00000400540 Q6ZQT0 140 aa5.56□□□□□ -1.52
LINC00544-201ENST00000400540 DSCR8Q96T75 97 aa5.56□□□□□ -1.52
LINC00544-201ENST00000400540 NDUFB1O75438 58 aa5.54□□□□□ -1.52
LINC00544-201ENST00000400540 HSD52Q0P140 79 aa5.54□□□□□ -1.52
LINC00544-201ENST00000400540 TMA7Q9Y2S6 64 aaKnown RBP5.54□□□□□ -1.52
LINC00544-201ENST00000400540 IGKV3D-7A0A0C4DH55 119 aa5.53□□□□□ -1.52
LINC00544-201ENST00000400540 H1FX-AS1Q4G0G2 97 aa5.53□□□□□ -1.52
LINC00544-201ENST00000400540 C9JAW5 83 aa5.52□□□□□ -1.53
LINC00544-201ENST00000400540 Q6ZVQ6 151 aa5.52□□□□□ -1.53
LINC00544-201ENST00000400540 BAALC-AS2P0C853 105 aa5.49□□□□□ -1.53
LINC00544-201ENST00000400540 C21orf62-AS1Q17RA5 79 aa5.49□□□□□ -1.53
LINC00544-201ENST00000400540 SCGB1C2P0DMR2 95 aa5.48□□□□□ -1.53
LINC00544-201ENST00000400540 MMP24-AS1A0A0U1RRL7 71 aa5.47□□□□□ -1.53
LINC00544-201ENST00000400540 PRR15Q8IV56 129 aa5.45□□□□□ -1.54
LINC00544-201ENST00000400540 MRPL34Q9BQ48 92 aaKnown RBP5.45□□□□□ -1.54
LINC00544-201ENST00000400540 A6NN06 94 aa5.44□□□□□ -1.54
LINC00544-201ENST00000400540 TMEM254Q8TBM7 123 aa5.44□□□□□ -1.54
LINC00544-201ENST00000400540 MDN1Q9NU22 5596 aa5.44□□□□□ -1.54
LINC00544-201ENST00000400540 IGKV2D-30A0A075B6S6 120 aa5.43□□□□□ -1.54
LINC00544-201ENST00000400540 LOC110117498A0A087WWA1 95 aa5.43□□□□□ -1.54
LINC00544-201ENST00000400540 IGKV2-30P06310 120 aa5.43□□□□□ -1.54
LINC00544-201ENST00000400540 MT1BP07438 61 aa5.43□□□□□ -1.54
LINC00544-201ENST00000400540 PYY3Q5JQD4 70 aa5.43□□□□□ -1.54
LINC00544-201ENST00000400540 H3BS24 57 aa5.42□□□□□ -1.54
LINC00544-201ENST00000400540 NDUFS5O43920 106 aa5.41□□□□□ -1.54
LINC00544-201ENST00000400540 KRTAP20-1Q3LI63 56 aa5.41□□□□□ -1.54
LINC00544-201ENST00000400540 C14orf132Q9NPU4 83 aa5.41□□□□□ -1.54
LINC00544-201ENST00000400540 JMJD7-PLA2G4BH0Y9G9 81 aa5.4□□□□□ -1.54
LINC00544-201ENST00000400540 Q5W150 140 aa5.4□□□□□ -1.54
LINC00544-201ENST00000400540 A0A1B0GW54 56 aa5.39□□□□□ -1.55
LINC00544-201ENST00000400540 hDV103S1A0JD37 113 aa5.39□□□□□ -1.55
LINC00544-201ENST00000400540 K7EQZ3 153 aa5.39□□□□□ -1.55
LINC00544-201ENST00000400540 C7orf65Q6ZTY9 151 aa5.39□□□□□ -1.55
LINC00544-201ENST00000400540 UQCR10Q9UDW1 63 aa5.39□□□□□ -1.55
LINC00544-201ENST00000400540 KMT2DO14686 5537 aa5.38□□□□□ -1.55
LINC00544-201ENST00000400540 NREPQ16612 68 aa5.38□□□□□ -1.55
LINC00544-201ENST00000400540 NAA38Q9BRA0 125 aaKnown RBP5.38□□□□□ -1.55
LINC00544-201ENST00000400540 FAM236AA0A1B0GUQ0 79 aa5.37□□□□□ -1.55
LINC00544-201ENST00000400540 FAM236BA0A1B0GV22 79 aa5.37□□□□□ -1.55
LINC00544-201ENST00000400540 C4orf26Q17RF5 130 aa5.37□□□□□ -1.55
LINC00544-201ENST00000400540 C5orf47Q569G3 176 aa5.37□□□□□ -1.55
LINC00544-201ENST00000400540 Q5VV11 94 aa5.37□□□□□ -1.55
LINC00544-201ENST00000400540 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
LINC00544-201ENST00000400540 ATXN8Q156A1 80 aa5.36□□□□□ -1.55
LINC00544-201ENST00000400540 PDE6GP18545 87 aa5.35□□□□□ -1.55
LINC00544-201ENST00000400540 KRTAP19-8Q3LI54 63 aa5.35□□□□□ -1.55
LINC00544-201ENST00000400540 KRTAP10-5P60370 271 aa5.34□□□□□ -1.55
LINC00544-201ENST00000400540 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
LINC00544-201ENST00000400540 SPRR2GQ9BYE4 73 aa5.33□□□□□ -1.56
LINC00544-201ENST00000400540 KRTAP3-1Q9BYR8 98 aa5.3□□□□□ -1.56
LINC00544-201ENST00000400540 HCG22E2RYF7 251 aa5.29□□□□□ -1.56
LINC00544-201ENST00000400540 S4R3F8 94 aa5.29□□□□□ -1.56
LINC00544-201ENST00000400540 Q8N9L7 120 aa5.28□□□□□ -1.56
LINC00544-201ENST00000400540 BPY2O14599 106 aa5.27□□□□□ -1.57
LINC00544-201ENST00000400540 LCA10Q71F78 164 aa5.27□□□□□ -1.57
LINC00544-201ENST00000400540 CASC2Q6XLA1 102 aa5.26□□□□□ -1.57
LINC00544-201ENST00000400540 CSAG1Q6PB30 78 aa5.24□□□□□ -1.57
LINC00544-201ENST00000400540 M0R143 59 aa5.22□□□□□ -1.57
LINC00544-201ENST00000400540 KLKP1Q107X0 134 aa5.22□□□□□ -1.57
LINC00544-201ENST00000400540 SVIPQ8NHG7 77 aa5.22□□□□□ -1.57
LINC00544-201ENST00000400540 CXCL6P80162 114 aa5.21□□□□□ -1.58
LINC00544-201ENST00000400540 C1orf64Q8NEQ6 169 aa5.21□□□□□ -1.58
LINC00544-201ENST00000400540 KRTAP4-12Q9BQ66 201 aa5.21□□□□□ -1.58
LINC00544-201ENST00000400540 IMUPQ9GZP8 106 aa5.19□□□□□ -1.58
LINC00544-201ENST00000400540 KRTAP2-3P0C7H8 128 aa5.18□□□□□ -1.58
LINC00544-201ENST00000400540 KRTAP2-4Q9BYR9 128 aa5.18□□□□□ -1.58
LINC00544-201ENST00000400540 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
LINC00544-201ENST00000400540 H3BT86 120 aa5.16□□□□□ -1.58
LINC00544-201ENST00000400540 SPRR2FQ96RM1 72 aa5.13□□□□□ -1.59
LINC00544-201ENST00000400540 TSTD3H0UI37 97 aa5.12□□□□□ -1.59
LINC00544-201ENST00000400540 SPRR2EP22531 72 aa5.12□□□□□ -1.59
LINC00544-201ENST00000400540 SPRR2BP35325 72 aa5.12□□□□□ -1.59
LINC00544-201ENST00000400540 SPRR2AP35326 72 aa5.12□□□□□ -1.59
LINC00544-201ENST00000400540 BATFQ16520 125 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms