RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 CYSTM1Q9H1C7 97 aa2.01□□□□□ -2.09
KNL1-202ENST00000399668 SPANXA2-OT1Q8N9U9 137 aa2.01□□□□□ -2.09
KNL1-202ENST00000399668 KRTAP1-5Q9BYS1 174 aa2.01□□□□□ -2.09
KNL1-202ENST00000399668 RBM12B-AS1Q9P1G2 102 aa2.01□□□□□ -2.09
KNL1-202ENST00000399668 CMYA5Q8N3K9 4069 aa2□□□□□ -2.09
KNL1-202ENST00000399668 CRIPTQ9P021 101 aa1.99□□□□□ -2.09
KNL1-202ENST00000399668 KMT2AQ03164 3969 aa1.98□□□□□ -2.09
KNL1-202ENST00000399668 SPRR1AP35321 89 aa1.98□□□□□ -2.09
KNL1-202ENST00000399668 Q1T7F1 81 aa1.98□□□□□ -2.09
KNL1-202ENST00000399668 KRTAP26-1Q6PEX3 210 aa1.97□□□□□ -2.09
KNL1-202ENST00000399668 IGLV7-46A0A075B6I9 117 aa1.97□□□□□ -2.09
KNL1-202ENST00000399668 CD164Q04900 197 aa1.97□□□□□ -2.09
KNL1-202ENST00000399668 PLAC8Q9NZF1 115 aa1.97□□□□□ -2.09
KNL1-202ENST00000399668 HRES1P13985 223 aa1.97□□□□□ -2.09
KNL1-202ENST00000399668 KTN1-AS1Q86SY8 53 aa1.97□□□□□ -2.09
KNL1-202ENST00000399668 KRTAP10-2P60368 255 aa1.97□□□□□ -2.09
KNL1-202ENST00000399668 LINC00472Q9H8W2 130 aa1.96□□□□□ -2.09
KNL1-202ENST00000399668 Q6ZSA8 131 aa1.96□□□□□ -2.1
KNL1-202ENST00000399668 Q8N9P0 234 aaPredicted RBP1.96□□□□□ -2.1
KNL1-202ENST00000399668 PANO1I0J062 215 aa1.96□□□□□ -2.1
KNL1-202ENST00000399668 MMP24-AS1A0A0U1RRL7 71 aa1.95□□□□□ -2.1
KNL1-202ENST00000399668 KRTAP10-1P60331 282 aa1.95□□□□□ -2.1
KNL1-202ENST00000399668 CDC42SE1Q9NRR8 79 aa1.95□□□□□ -2.1
KNL1-202ENST00000399668 FP248Q71RG6 208 aaPredicted RBP1.95□□□□□ -2.1
KNL1-202ENST00000399668 A0A1B0GU33 70 aa1.95□□□□□ -2.1
KNL1-202ENST00000399668 M0R2T5 61 aa1.95□□□□□ -2.1
KNL1-202ENST00000399668 A0A087X002 238 aa1.94□□□□□ -2.1
KNL1-202ENST00000399668 DNAH7Q8WXX0 4024 aa1.94□□□□□ -2.1
KNL1-202ENST00000399668 Q5W150 140 aa1.94□□□□□ -2.1
KNL1-202ENST00000399668 KRTAP4-16G5E9R7 235 aaPredicted RBP1.93□□□□□ -2.1
KNL1-202ENST00000399668 SPINK7P58062 85 aa1.93□□□□□ -2.1
KNL1-202ENST00000399668 Q5XG85 94 aa1.93□□□□□ -2.1
KNL1-202ENST00000399668 ZCCHC13Q8WW36 166 aaKnown RBP1.93□□□□□ -2.1
KNL1-202ENST00000399668 Q75L30 129 aa1.93□□□□□ -2.1
KNL1-202ENST00000399668 KRTAP11-1Q8IUC1 163 aa1.93□□□□□ -2.1
KNL1-202ENST00000399668 KRTAP17-1Q9BYP8 105 aa1.93□□□□□ -2.1
KNL1-202ENST00000399668 S4R3F8 94 aa1.93□□□□□ -2.1
KNL1-202ENST00000399668 LCA10Q71F78 164 aa1.93□□□□□ -2.1
KNL1-202ENST00000399668 OXTP01178 125 aa1.92□□□□□ -2.1
KNL1-202ENST00000399668 Q5VSD8 79 aa1.92□□□□□ -2.1
KNL1-202ENST00000399668 Q5VV11 94 aa1.92□□□□□ -2.1
KNL1-202ENST00000399668 CAMK2N1Q7Z7J9 78 aa1.91□□□□□ -2.1
KNL1-202ENST00000399668 SPRR1BP22528 89 aa1.91□□□□□ -2.1
KNL1-202ENST00000399668 NOTCH2NLQ7Z3S9 236 aa1.91□□□□□ -2.1
KNL1-202ENST00000399668 LINC00483Q53H64 154 aa1.91□□□□□ -2.1
KNL1-202ENST00000399668 LUZP6Q538Z0 58 aa1.9□□□□□ -2.1
KNL1-202ENST00000399668 ANK3Q12955 4377 aaKnown RBP1.9□□□□□ -2.11
KNL1-202ENST00000399668 CSAG1Q6PB30 78 aa1.9□□□□□ -2.11
KNL1-202ENST00000399668 R4GN34 69 aa1.89□□□□□ -2.11
KNL1-202ENST00000399668 Q6ZR54 194 aa1.89□□□□□ -2.11
KNL1-202ENST00000399668 DMAC1Q96GE9 116 aa1.89□□□□□ -2.11
KNL1-202ENST00000399668 LINC01558Q9Y6Z2 57 aa1.89□□□□□ -2.11
KNL1-202ENST00000399668 PRAC1Q96KF2 57 aa1.89□□□□□ -2.11
KNL1-202ENST00000399668 LCE6AA0A183 80 aa1.88□□□□□ -2.11
KNL1-202ENST00000399668 KRTAP7-1Q8IUC3 87 aa1.88□□□□□ -2.11
KNL1-202ENST00000399668 HUWE1Q7Z6Z7 4374 aaKnown RBP1.88□□□□□ -2.11
KNL1-202ENST00000399668 VPS13BQ7Z7G8 4022 aa1.88□□□□□ -2.11
KNL1-202ENST00000399668 HECTD4Q9Y4D8 3996 aa1.87□□□□□ -2.11
KNL1-202ENST00000399668 Q6ZRN7 208 aaPredicted RBP1.87□□□□□ -2.11
KNL1-202ENST00000399668 KRTAP29-1A8MX34 341 aaPredicted RBP1.87□□□□□ -2.11
KNL1-202ENST00000399668 SPATA8Q6RVD6 105 aa1.87□□□□□ -2.11
KNL1-202ENST00000399668 SEC61BP60468 96 aaKnown RBP1.86□□□□□ -2.11
KNL1-202ENST00000399668 ADM2Q7Z4H4 148 aa1.86□□□□□ -2.11
KNL1-202ENST00000399668 M0QZ58 72 aa1.85□□□□□ -2.11
KNL1-202ENST00000399668 H1FX-AS1Q4G0G2 97 aa1.85□□□□□ -2.11
KNL1-202ENST00000399668 RPL37P61927 97 aaKnown RBP1.84□□□□□ -2.11
KNL1-202ENST00000399668 ASB16-AS1Q495Z4 193 aa1.83□□□□□ -2.12
KNL1-202ENST00000399668 ROMO1P60602 79 aa1.83□□□□□ -2.12
KNL1-202ENST00000399668 KRTAP13-2Q52LG2 175 aa1.83□□□□□ -2.12
KNL1-202ENST00000399668 KRTAP13-1Q8IUC0 172 aa1.82□□□□□ -2.12
KNL1-202ENST00000399668 PRKDCP78527 4128 aaKnown RBP1.82□□□□□ -2.12
KNL1-202ENST00000399668 A8MU10 97 aa1.82□□□□□ -2.12
KNL1-202ENST00000399668 A8MUU9 505 aa1.81□□□□□ -2.12
KNL1-202ENST00000399668 DNAH6Q9C0G6 4158 aa1.81□□□□□ -2.12
KNL1-202ENST00000399668 H3BS24 57 aa1.8□□□□□ -2.12
KNL1-202ENST00000399668 DNAH3Q8TD57 4116 aa1.8□□□□□ -2.12
KNL1-202ENST00000399668 KRTAP21-3Q3LHN1 58 aa1.79□□□□□ -2.12
KNL1-202ENST00000399668 RPS29P62273 56 aaKnown RBP1.79□□□□□ -2.12
KNL1-202ENST00000399668 DNAH10Q8IVF4 4471 aa1.79□□□□□ -2.12
KNL1-202ENST00000399668 PLAC4Q8WY50 150 aa1.79□□□□□ -2.12
KNL1-202ENST00000399668 C20orf166-AS1Q96NR2 134 aa1.77□□□□□ -2.13
KNL1-202ENST00000399668 PKHD1P08F94 4074 aa1.75□□□□□ -2.13
KNL1-202ENST00000399668 A6NN06 94 aa1.75□□□□□ -2.13
KNL1-202ENST00000399668 PCLOQ9Y6V0 5065 aa1.75□□□□□ -2.13
KNL1-202ENST00000399668 DNAH2Q9P225 4427 aa1.75□□□□□ -2.13
KNL1-202ENST00000399668 KRTAP25-1Q3LHN0 102 aa1.75□□□□□ -2.13
KNL1-202ENST00000399668 KRTAP1-4P0C5Y4 121 aa1.74□□□□□ -2.13
KNL1-202ENST00000399668 A0A0A0MQY5 61 aa1.73□□□□□ -2.13
KNL1-202ENST00000399668 A0A1B0GVY2 172 aa1.73□□□□□ -2.13
KNL1-202ENST00000399668 H0YAA0 97 aa1.72□□□□□ -2.13
KNL1-202ENST00000399668 XP32Q5T750 250 aa1.72□□□□□ -2.13
KNL1-202ENST00000399668 ALMS1Q8TCU4 4167 aa1.72□□□□□ -2.13
KNL1-202ENST00000399668 DNAH1Q9P2D7 4330 aa1.71□□□□□ -2.14
KNL1-202ENST00000399668 NDUFAF8A1L188 74 aa1.71□□□□□ -2.14
KNL1-202ENST00000399668 TNP1P09430 55 aa1.7□□□□□ -2.14
KNL1-202ENST00000399668 KRTAP10-8P60410 259 aa1.7□□□□□ -2.14
KNL1-202ENST00000399668 C10orf95Q9H7T3 257 aa1.7□□□□□ -2.14
KNL1-202ENST00000399668 EPPK1P58107 5090 aaKnown RBP1.69□□□□□ -2.14
KNL1-202ENST00000399668 KRTAP16-1A8MUX0 517 aa1.69□□□□□ -2.14
KNL1-202ENST00000399668 DNAH9Q9NYC9 4486 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms