RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 KRTAP21-3Q3LHN1 58 aa13.57□□□□□ -0.24
RABGGTA-202ENST00000399409 BRK1Q8WUW1 75 aa13.56□□□□□ -0.24
RABGGTA-202ENST00000399409 A0A087X002 238 aa13.55□□□□□ -0.24
RABGGTA-202ENST00000399409 NOTCH2NLQ7Z3S9 236 aa13.55□□□□□ -0.24
RABGGTA-202ENST00000399409 SPINK6Q6UWN8 80 aa13.53□□□□□ -0.24
RABGGTA-202ENST00000399409 PCOTHQ58A44 107 aa13.52□□□□□ -0.25
RABGGTA-202ENST00000399409 TGP01266 2768 aa13.51□□□□□ -0.25
RABGGTA-202ENST00000399409 Q6ZSA8 131 aa13.51□□□□□ -0.25
RABGGTA-202ENST00000399409 C8orf87E5RJ46 101 aa13.5□□□□□ -0.25
RABGGTA-202ENST00000399409 C1orf195Q5TG92 126 aa13.49□□□□□ -0.25
RABGGTA-202ENST00000399409 COA5Q86WW8 74 aa13.47□□□□□ -0.25
RABGGTA-202ENST00000399409 FRAS1Q86XX4 4008 aa13.46□□□□□ -0.25
RABGGTA-202ENST00000399409 LOC101927531A0A1B0GV80 90 aa13.44□□□□□ -0.26
RABGGTA-202ENST00000399409 PSPHP1O15172 72 aa13.44□□□□□ -0.26
RABGGTA-202ENST00000399409 KRTAP10-1P60331 282 aa13.43□□□□□ -0.26
RABGGTA-202ENST00000399409 LIMD2Q9BT23 127 aa13.43□□□□□ -0.26
RABGGTA-202ENST00000399409 Q8N9P0 234 aaPredicted RBP13.42□□□□□ -0.26
RABGGTA-202ENST00000399409 KRTAP13-3Q3SY46 172 aa13.39□□□□□ -0.27
RABGGTA-202ENST00000399409 KRTAP13-2Q52LG2 175 aa13.39□□□□□ -0.27
RABGGTA-202ENST00000399409 ALMS1Q8TCU4 4167 aa13.39□□□□□ -0.27
RABGGTA-202ENST00000399409 A8MUN3 132 aa13.38□□□□□ -0.27
RABGGTA-202ENST00000399409 DNAH5Q8TE73 4624 aa13.36□□□□□ -0.27
RABGGTA-202ENST00000399409 DNAH11Q96DT5 4516 aa13.36□□□□□ -0.27
RABGGTA-202ENST00000399409 Q5W150 140 aa13.36□□□□□ -0.27
RABGGTA-202ENST00000399409 LINC00313P59037 77 aa13.34□□□□□ -0.27
RABGGTA-202ENST00000399409 Q5VV11 94 aa13.32□□□□□ -0.28
RABGGTA-202ENST00000399409 KRTAP1-4P0C5Y4 121 aa13.28□□□□□ -0.28
RABGGTA-202ENST00000399409 HRES1P13985 223 aa13.27□□□□□ -0.29
RABGGTA-202ENST00000399409 FAM229AH3BQW9 127 aa13.26□□□□□ -0.29
RABGGTA-202ENST00000399409 PRR15LQ9BU68 103 aa13.26□□□□□ -0.29
RABGGTA-202ENST00000399409 PKD1P98161 4303 aa13.21□□□□□ -0.29
RABGGTA-202ENST00000399409 CHKB-CPT1BH3BT56 60 aa13.19□□□□□ -0.3
RABGGTA-202ENST00000399409 Q75L30 129 aa13.19□□□□□ -0.3
RABGGTA-202ENST00000399409 LINC01558Q9Y6Z2 57 aa13.19□□□□□ -0.3
RABGGTA-202ENST00000399409 C4orf48Q5BLP8 95 aa13.17□□□□□ -0.3
RABGGTA-202ENST00000399409 KRTAP16-1A8MUX0 517 aa13.15□□□□□ -0.3
RABGGTA-202ENST00000399409 PLA2G1BP04054 148 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-202ENST00000399409 FAT2Q9NYQ8 4349 aa13.14□□□□□ -0.31
RABGGTA-202ENST00000399409 LRP1BQ9NZR2 4599 aa13.14□□□□□ -0.31
RABGGTA-202ENST00000399409 ACYP2P14621 99 aa13.13□□□□□ -0.31
RABGGTA-202ENST00000399409 SPAG11AQ6PDA7 123 aa13.13□□□□□ -0.31
RABGGTA-202ENST00000399409 TYMSOSQ8TAI1 123 aa13.13□□□□□ -0.31
RABGGTA-202ENST00000399409 SPINK1P00995 79 aa13.11□□□□□ -0.31
RABGGTA-202ENST00000399409 IGKV2-30P06310 120 aa13.11□□□□□ -0.31
RABGGTA-202ENST00000399409 DMAC1Q96GE9 116 aa13.08□□□□□ -0.32
RABGGTA-202ENST00000399409 RETNLBQ9BQ08 111 aa13.06□□□□□ -0.32
RABGGTA-202ENST00000399409 HYDINQ4G0P3 5121 aa13.05□□□□□ -0.32
RABGGTA-202ENST00000399409 A6NED7 52 aa13.02□□□□□ -0.32
RABGGTA-202ENST00000399409 RPS29P62273 56 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-202ENST00000399409 PRR26Q8N8Z3 221 aa12.99□□□□□ -0.33
RABGGTA-202ENST00000399409 VPS13BQ7Z7G8 4022 aa12.96□□□□□ -0.33
RABGGTA-202ENST00000399409 LINC00304Q8N9R0 145 aa12.96□□□□□ -0.34
RABGGTA-202ENST00000399409 A8MU10 97 aa12.95□□□□□ -0.34
RABGGTA-202ENST00000399409 LCA10Q71F78 164 aa12.93□□□□□ -0.34
RABGGTA-202ENST00000399409 CDC42SE1Q9NRR8 79 aa12.92□□□□□ -0.34
RABGGTA-202ENST00000399409 IGKV2D-30A0A075B6S6 120 aa12.89□□□□□ -0.35
RABGGTA-202ENST00000399409 ATP11AUNQ6ZP68 121 aa12.88□□□□□ -0.35
RABGGTA-202ENST00000399409 PMAIP1Q13794 54 aa12.83□□□□□ -0.35
RABGGTA-202ENST00000399409 SPINK7P58062 85 aa12.81□□□□□ -0.36
RABGGTA-202ENST00000399409 SACSQ9NZJ4 4579 aa12.8□□□□□ -0.36
RABGGTA-202ENST00000399409 A0A1B0GVY2 172 aa12.8□□□□□ -0.36
RABGGTA-202ENST00000399409 SMR3BP02814 79 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-202ENST00000399409 SPTSSBQ8NFR3 76 aa12.79□□□□□ -0.36
RABGGTA-202ENST00000399409 C7orf65Q6ZTY9 151 aa12.77□□□□□ -0.37
RABGGTA-202ENST00000399409 KRTAP10-4P60372 401 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-202ENST00000399409 A0A1B0GU69 56 aa12.71□□□□□ -0.37
RABGGTA-202ENST00000399409 PKHD1P08F94 4074 aa12.69□□□□□ -0.38
RABGGTA-202ENST00000399409 DYNC1H1Q14204 4646 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-202ENST00000399409 A8MUU9 505 aa12.64□□□□□ -0.39
RABGGTA-202ENST00000399409 C20orf166-AS1Q96NR2 134 aa12.64□□□□□ -0.39
RABGGTA-202ENST00000399409 A6NN06 94 aa12.64□□□□□ -0.39
RABGGTA-202ENST00000399409 C9orf92A6NGG3 77 aa12.58□□□□□ -0.4
RABGGTA-202ENST00000399409 KMT2CQ8NEZ4 4911 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-202ENST00000399409 KTN1-AS1Q86SY8 53 aa12.57□□□□□ -0.4
RABGGTA-202ENST00000399409 PKHD1L1Q86WI1 4243 aa12.55□□□□□ -0.4
RABGGTA-202ENST00000399409 Q8N1X5 172 aa12.54□□□□□ -0.4
RABGGTA-202ENST00000399409 APOBP04114 4563 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-202ENST00000399409 SPATA8Q6RVD6 105 aa12.5□□□□□ -0.41
RABGGTA-202ENST00000399409 UQCR11O14957 56 aa12.49□□□□□ -0.41
RABGGTA-202ENST00000399409 MIR22HGQ0VDD5 57 aa12.42□□□□□ -0.42
RABGGTA-202ENST00000399409 FAT1Q14517 4588 aa12.42□□□□□ -0.42
RABGGTA-202ENST00000399409 SEC61GP60059 68 aa12.39□□□□□ -0.43
RABGGTA-202ENST00000399409 RYR2Q92736 4967 aa12.38□□□□□ -0.43
RABGGTA-202ENST00000399409 KRTAP3-1Q9BYR8 98 aa12.31□□□□□ -0.44
RABGGTA-202ENST00000399409 RYR3Q15413 4870 aa12.31□□□□□ -0.44
RABGGTA-202ENST00000399409 KRTAP10-8P60410 259 aa12.27□□□□□ -0.44
RABGGTA-202ENST00000399409 FLG2Q5D862 2391 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-202ENST00000399409 COX6B2Q6YFQ2 88 aa12.22□□□□□ -0.45
RABGGTA-202ENST00000399409 Q5VSD8 79 aa12.2□□□□□ -0.46
RABGGTA-202ENST00000399409 RBM12B-AS1Q9P1G2 102 aa12.16□□□□□ -0.46
RABGGTA-202ENST00000399409 RPL37P61927 97 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-202ENST00000399409 FAT3Q8TDW7 4589 aa12.08□□□□□ -0.48
RABGGTA-202ENST00000399409 TNXBP22105 4242 aa12.06□□□□□ -0.48
RABGGTA-202ENST00000399409 A0A1B0GU33 70 aa12.06□□□□□ -0.48
RABGGTA-202ENST00000399409 H1FX-AS1Q4G0G2 97 aa12.02□□□□□ -0.49
RABGGTA-202ENST00000399409 H0YAA0 97 aa12.02□□□□□ -0.49
RABGGTA-202ENST00000399409 XP32Q5T750 250 aa11.99□□□□□ -0.49
RABGGTA-202ENST00000399409 HSPG2P98160 4391 aa11.97□□□□□ -0.49
RABGGTA-202ENST00000399409 LRP1Q07954 4544 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-202ENST00000399409 PRAC1Q96KF2 57 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms