RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 SRRM2Q9UQ35 2752 aaKnown RBP0.5□□□□□ -2.33
RPS4XP3-201ENST00000398541 C9orf92A6NGG3 77 aa0.5□□□□□ -2.33
RPS4XP3-201ENST00000398541 CELSR1Q9NYQ6 3014 aa0.5□□□□□ -2.33
RPS4XP3-201ENST00000398541 KMT2AQ03164 3969 aa0.49□□□□□ -2.33
RPS4XP3-201ENST00000398541 ACACAQ13085 2346 aa0.49□□□□□ -2.33
RPS4XP3-201ENST00000398541 LYSTQ99698 3801 aa0.49□□□□□ -2.33
RPS4XP3-201ENST00000398541 DMBT1Q9UGM3 2413 aaPredicted RBP0.48□□□□□ -2.33
RPS4XP3-201ENST00000398541 MMP24-AS1A0A0U1RRL7 71 aa0.48□□□□□ -2.33
RPS4XP3-201ENST00000398541 A8MTW9 85 aa0.48□□□□□ -2.33
RPS4XP3-201ENST00000398541 LPAP08519 4548 aa0.48□□□□□ -2.33
RPS4XP3-201ENST00000398541 FLNBO75369 2602 aaKnown RBP0.48□□□□□ -2.33
RPS4XP3-201ENST00000398541 RIF1Q5UIP0 2472 aaKnown RBP0.47□□□□□ -2.33
RPS4XP3-201ENST00000398541 SPRR2DP22532 72 aa0.47□□□□□ -2.33
RPS4XP3-201ENST00000398541 SNRPGP62308 76 aaKnown RBP0.47□□□□□ -2.33
RPS4XP3-201ENST00000398541 MTORP42345 2549 aa0.46□□□□□ -2.34
RPS4XP3-201ENST00000398541 NF1P21359 2839 aa0.46□□□□□ -2.34
RPS4XP3-201ENST00000398541 LRRK2Q5S007 2527 aa0.46□□□□□ -2.34
RPS4XP3-201ENST00000398541 NSD1Q96L73 2696 aaPredicted RBP0.46□□□□□ -2.34
RPS4XP3-201ENST00000398541 SPG11Q96JI7 2443 aa0.46□□□□□ -2.34
RPS4XP3-201ENST00000398541 DCHS2Q6V1P9 2916 aa0.45□□□□□ -2.34
RPS4XP3-201ENST00000398541 M0QZ58 72 aa0.45□□□□□ -2.34
RPS4XP3-201ENST00000398541 DEFB110Q30KQ9 67 aa0.45□□□□□ -2.34
RPS4XP3-201ENST00000398541 TENM3Q9P273 2699 aa0.44□□□□□ -2.34
RPS4XP3-201ENST00000398541 SETD2Q9BYW2 2564 aaPredicted RBP0.44□□□□□ -2.34
RPS4XP3-201ENST00000398541 SPTBN4Q9H254 2564 aa0.44□□□□□ -2.34
RPS4XP3-201ENST00000398541 TNP1P09430 55 aa0.44□□□□□ -2.34
RPS4XP3-201ENST00000398541 FLNCQ14315 2725 aa0.44□□□□□ -2.34
RPS4XP3-201ENST00000398541 HRNRQ86YZ3 2850 aaPredicted RBP0.44□□□□□ -2.34
RPS4XP3-201ENST00000398541 FAM186AA6NE01 2351 aa0.43□□□□□ -2.34
RPS4XP3-201ENST00000398541 A0A0C4DFX4 3053 aa0.43□□□□□ -2.34
RPS4XP3-201ENST00000398541 EPG5Q9HCE0 2579 aa0.43□□□□□ -2.34
RPS4XP3-201ENST00000398541 FAT4Q6V0I7 4981 aa0.43□□□□□ -2.34
RPS4XP3-201ENST00000398541 POLR2KP53803 58 aaKnown RBP0.43□□□□□ -2.34
RPS4XP3-201ENST00000398541 GCN1Q92616 2671 aaKnown RBP0.42□□□□□ -2.34
RPS4XP3-201ENST00000398541 FLNAP21333 2647 aaKnown RBP0.42□□□□□ -2.34
RPS4XP3-201ENST00000398541 SPRR2BP35325 72 aa0.42□□□□□ -2.34
RPS4XP3-201ENST00000398541 ZZEF1O43149 2961 aa0.42□□□□□ -2.34
RPS4XP3-201ENST00000398541 ANKHD1Q8IWZ3 2542 aaKnown RBP0.41□□□□□ -2.34
RPS4XP3-201ENST00000398541 COL6A5A8TX70 2615 aa0.41□□□□□ -2.34
RPS4XP3-201ENST00000398541 VPS13BQ7Z7G8 4022 aa0.41□□□□□ -2.34
RPS4XP3-201ENST00000398541 SONP18583 2426 aaKnown RBP0.41□□□□□ -2.34
RPS4XP3-201ENST00000398541 TOMM7Q9P0U1 55 aa0.41□□□□□ -2.34
RPS4XP3-201ENST00000398541 SPTBN5Q9NRC6 3674 aaKnown RBP0.41□□□□□ -2.34
RPS4XP3-201ENST00000398541 PKD1P98161 4303 aa0.4□□□□□ -2.35
RPS4XP3-201ENST00000398541 SPART-AS1P0CW21 52 aa0.4□□□□□ -2.35
RPS4XP3-201ENST00000398541 RPL39P62891 51 aaKnown RBP0.4□□□□□ -2.35
RPS4XP3-201ENST00000398541 STAB1Q9NY15 2570 aa0.4□□□□□ -2.35
RPS4XP3-201ENST00000398541 DNAH9Q9NYC9 4486 aa0.4□□□□□ -2.35
RPS4XP3-201ENST00000398541 MAST4O15021 2626 aa0.39□□□□□ -2.35
RPS4XP3-201ENST00000398541 AHNAKQ09666 5890 aaKnown RBP0.39□□□□□ -2.35
RPS4XP3-201ENST00000398541 SACSQ9NZJ4 4579 aa0.39□□□□□ -2.35
RPS4XP3-201ENST00000398541 TENM2Q9NT68 2774 aa0.39□□□□□ -2.35
RPS4XP3-201ENST00000398541 FASNP49327 2511 aaKnown RBP0.38□□□□□ -2.35
RPS4XP3-201ENST00000398541 DMXL1Q9Y485 3027 aa0.38□□□□□ -2.35
RPS4XP3-201ENST00000398541 DMDP11532 3685 aa0.38□□□□□ -2.35
RPS4XP3-201ENST00000398541 UTP20O75691 2785 aaKnown RBP0.38□□□□□ -2.35
RPS4XP3-201ENST00000398541 CCDC168Q8NDH2 2452 aa0.38□□□□□ -2.35
RPS4XP3-201ENST00000398541 CLPSL2Q6UWE3 100 aa0.38□□□□□ -2.35
RPS4XP3-201ENST00000398541 UTRNP46939 3433 aa0.38□□□□□ -2.35
RPS4XP3-201ENST00000398541 GCC2Q8IWJ2 1684 aa0.37□□□□□ -2.35
RPS4XP3-201ENST00000398541 HECTD4Q9Y4D8 3996 aa0.37□□□□□ -2.35
RPS4XP3-201ENST00000398541 PDZD2O15018 2839 aa0.37□□□□□ -2.35
RPS4XP3-201ENST00000398541 MROH2BQ7Z745 1585 aa0.36□□□□□ -2.35
RPS4XP3-201ENST00000398541 COL7A1Q02388 2944 aa0.36□□□□□ -2.35
RPS4XP3-201ENST00000398541 HSPG2P98160 4391 aa0.36□□□□□ -2.35
RPS4XP3-201ENST00000398541 ZFHX4Q86UP3 3567 aa0.36□□□□□ -2.35
RPS4XP3-201ENST00000398541 RPL39LQ96EH5 51 aaKnown RBP0.36□□□□□ -2.35
RPS4XP3-201ENST00000398541 NBPF19A0A087WUL8 3843 aa0.36□□□□□ -2.35
RPS4XP3-201ENST00000398541 SRCAPQ6ZRS2 3230 aa0.36□□□□□ -2.35
RPS4XP3-201ENST00000398541 MYO15AQ9UKN7 3530 aa0.35□□□□□ -2.35
RPS4XP3-201ENST00000398541 LAMA5O15230 3695 aa0.35□□□□□ -2.35
RPS4XP3-201ENST00000398541 SPENQ96T58 3664 aaKnown RBP0.35□□□□□ -2.35
RPS4XP3-201ENST00000398541 ANKRD11Q6UB99 2663 aaPredicted RBP0.35□□□□□ -2.35
RPS4XP3-201ENST00000398541 LEAP2Q969E1 77 aa0.35□□□□□ -2.35
RPS4XP3-201ENST00000398541 NBEAL2Q6ZNJ1 2754 aa0.35□□□□□ -2.35
RPS4XP3-201ENST00000398541 CUBNO60494 3623 aa0.35□□□□□ -2.35
RPS4XP3-201ENST00000398541 SMG1Q96Q15 3661 aaKnown RBP0.35□□□□□ -2.35
RPS4XP3-201ENST00000398541 DNAH3Q8TD57 4116 aa0.35□□□□□ -2.35
RPS4XP3-201ENST00000398541 NBEAQ8NFP9 2946 aa0.34□□□□□ -2.35
RPS4XP3-201ENST00000398541 FLGP20930 4061 aaPredicted RBP0.34□□□□□ -2.35
RPS4XP3-201ENST00000398541 AKAP9Q99996 3911 aa0.34□□□□□ -2.35
RPS4XP3-201ENST00000398541 ANK3Q12955 4377 aaKnown RBP0.34□□□□□ -2.35
RPS4XP3-201ENST00000398541 PHGR1C9JFL3 82 aa0.34□□□□□ -2.36
RPS4XP3-201ENST00000398541 DUOX1Q9NRD9 1551 aa0.34□□□□□ -2.36
RPS4XP3-201ENST00000398541 MUC3AQ02505 3323 aa0.34□□□□□ -2.36
RPS4XP3-201ENST00000398541 USP34Q70CQ2 3546 aa0.33□□□□□ -2.36
RPS4XP3-201ENST00000398541 MYO18BQ8IUG5 2567 aa0.33□□□□□ -2.36
RPS4XP3-201ENST00000398541 PCNTO95613 3336 aa0.33□□□□□ -2.36
RPS4XP3-201ENST00000398541 ACACBO00763 2458 aa0.33□□□□□ -2.36
RPS4XP3-201ENST00000398541 DNAH11Q96DT5 4516 aa0.33□□□□□ -2.36
RPS4XP3-201ENST00000398541 DNAH14Q0VDD8 3507 aa0.33□□□□□ -2.36
RPS4XP3-201ENST00000398541 WDFY3Q8IZQ1 3526 aa0.33□□□□□ -2.36
RPS4XP3-201ENST00000398541 MUC5BQ9HC84 5762 aaPredicted RBP0.33□□□□□ -2.36
RPS4XP3-201ENST00000398541 KALRNO60229 2985 aa0.33□□□□□ -2.36
RPS4XP3-201ENST00000398541 VPS13CQ709C8 3753 aa0.32□□□□□ -2.36
RPS4XP3-201ENST00000398541 HMCN2Q8NDA2 5059 aa0.32□□□□□ -2.36
RPS4XP3-201ENST00000398541 COL12A1Q99715 3063 aa0.32□□□□□ -2.36
RPS4XP3-201ENST00000398541 LRP1BQ9NZR2 4599 aa0.32□□□□□ -2.36
RPS4XP3-201ENST00000398541 ASPMQ8IZT6 3477 aa0.32□□□□□ -2.36
RPS4XP3-201ENST00000398541 PKHD1P08F94 4074 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms