RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 FAM168BA1KXE4 195 aa1.72□□□□□ -2.13
CHD9-202ENST00000398510 Q8N377 158 aa1.72□□□□□ -2.13
CHD9-202ENST00000398510 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.72□□□□□ -2.13
CHD9-202ENST00000398510 DSCR10P59022 87 aa1.72□□□□□ -2.13
CHD9-202ENST00000398510 A0A1B0GU33 70 aa1.71□□□□□ -2.14
CHD9-202ENST00000398510 CUBNO60494 3623 aa1.71□□□□□ -2.14
CHD9-202ENST00000398510 SPRR1BP22528 89 aa1.71□□□□□ -2.14
CHD9-202ENST00000398510 Q75L30 129 aa1.7□□□□□ -2.14
CHD9-202ENST00000398510 URB1-AS1Q96HZ7 61 aa1.7□□□□□ -2.14
CHD9-202ENST00000398510 LYSTQ99698 3801 aa1.7□□□□□ -2.14
CHD9-202ENST00000398510 GAS8-AS1O95177 125 aa1.7□□□□□ -2.14
CHD9-202ENST00000398510 LINC00310P59036 64 aa1.7□□□□□ -2.14
CHD9-202ENST00000398510 KRTAP19-4Q3LI73 84 aa1.7□□□□□ -2.14
CHD9-202ENST00000398510 FAM218AQ96MZ4 157 aa1.7□□□□□ -2.14
CHD9-202ENST00000398510 CSMD3Q7Z407 3707 aa1.7□□□□□ -2.14
CHD9-202ENST00000398510 KRTAP1-1Q07627 177 aa1.7□□□□□ -2.14
CHD9-202ENST00000398510 ANK2Q01484 3957 aa1.7□□□□□ -2.14
CHD9-202ENST00000398510 PRO0461Q9UI25 63 aa1.69□□□□□ -2.14
CHD9-202ENST00000398510 GIG44P09565 113 aaPredicted RBP1.69□□□□□ -2.14
CHD9-202ENST00000398510 PRO2289Q9P1D8 64 aa1.69□□□□□ -2.14
CHD9-202ENST00000398510 KRTAP1-3Q8IUG1 177 aa1.69□□□□□ -2.14
CHD9-202ENST00000398510 A0A087X002 238 aa1.69□□□□□ -2.14
CHD9-202ENST00000398510 HECTD4Q9Y4D8 3996 aa1.68□□□□□ -2.14
CHD9-202ENST00000398510 LCA10Q71F78 164 aa1.68□□□□□ -2.14
CHD9-202ENST00000398510 SMR3BP02814 79 aaPredicted RBP1.68□□□□□ -2.14
CHD9-202ENST00000398510 SPRR1AP35321 89 aa1.68□□□□□ -2.14
CHD9-202ENST00000398510 PANO1I0J062 215 aa1.67□□□□□ -2.14
CHD9-202ENST00000398510 PP632Q6XCG6 107 aa1.67□□□□□ -2.14
CHD9-202ENST00000398510 H1FX-AS1Q4G0G2 97 aa1.67□□□□□ -2.14
CHD9-202ENST00000398510 OCR1Q9BZK8 76 aa1.67□□□□□ -2.14
CHD9-202ENST00000398510 A0A1W2PNM2 257 aa1.67□□□□□ -2.14
CHD9-202ENST00000398510 Q6ZR54 194 aa1.66□□□□□ -2.14
CHD9-202ENST00000398510 DNAH3Q8TD57 4116 aa1.66□□□□□ -2.14
CHD9-202ENST00000398510 TENM2Q9NT68 2774 aa1.66□□□□□ -2.14
CHD9-202ENST00000398510 RPL37P61927 97 aaKnown RBP1.66□□□□□ -2.14
CHD9-202ENST00000398510 FBN1P35555 2871 aaKnown RBP1.65□□□□□ -2.15
CHD9-202ENST00000398510 SPINK7P58062 85 aa1.65□□□□□ -2.15
CHD9-202ENST00000398510 ROMO1P60602 79 aa1.65□□□□□ -2.15
CHD9-202ENST00000398510 LINC00472Q9H8W2 130 aa1.65□□□□□ -2.15
CHD9-202ENST00000398510 A0A0D9SG42 100 aa1.64□□□□□ -2.15
CHD9-202ENST00000398510 A0A1W2PNN7 141 aa1.64□□□□□ -2.15
CHD9-202ENST00000398510 TPRXLQ17RH7 258 aa1.64□□□□□ -2.15
CHD9-202ENST00000398510 Q8N1X5 172 aa1.64□□□□□ -2.15
CHD9-202ENST00000398510 DNAH7Q8WXX0 4024 aa1.64□□□□□ -2.15
CHD9-202ENST00000398510 KRTAP10-3P60369 221 aa1.64□□□□□ -2.15
CHD9-202ENST00000398510 CYSTM1Q9H1C7 97 aa1.64□□□□□ -2.15
CHD9-202ENST00000398510 LINC01558Q9Y6Z2 57 aa1.64□□□□□ -2.15
CHD9-202ENST00000398510 TNP1P09430 55 aa1.64□□□□□ -2.15
CHD9-202ENST00000398510 OTOGQ6ZRI0 2925 aa1.63□□□□□ -2.15
CHD9-202ENST00000398510 ANAPC11Q9NYG5 84 aa1.63□□□□□ -2.15
CHD9-202ENST00000398510 Q5W150 140 aa1.63□□□□□ -2.15
CHD9-202ENST00000398510 MMP24-AS1A0A0U1RRL7 71 aa1.62□□□□□ -2.15
CHD9-202ENST00000398510 Q8N9P0 234 aaPredicted RBP1.61□□□□□ -2.15
CHD9-202ENST00000398510 Q6ZRN7 208 aaPredicted RBP1.59□□□□□ -2.15
CHD9-202ENST00000398510 KRTAP3-3Q9BYR6 98 aa1.59□□□□□ -2.15
CHD9-202ENST00000398510 KRTAP3-2Q9BYR7 98 aa1.59□□□□□ -2.15
CHD9-202ENST00000398510 C20orf166-AS1Q96NR2 134 aa1.59□□□□□ -2.15
CHD9-202ENST00000398510 COL7A1Q02388 2944 aa1.59□□□□□ -2.16
CHD9-202ENST00000398510 SPATA8Q6RVD6 105 aa1.58□□□□□ -2.16
CHD9-202ENST00000398510 A8MUU9 505 aa1.58□□□□□ -2.16
CHD9-202ENST00000398510 KRTAP4-16G5E9R7 235 aaPredicted RBP1.58□□□□□ -2.16
CHD9-202ENST00000398510 TGP01266 2768 aa1.58□□□□□ -2.16
CHD9-202ENST00000398510 KRTAP16-1A8MUX0 517 aa1.58□□□□□ -2.16
CHD9-202ENST00000398510 ADM2Q7Z4H4 148 aa1.58□□□□□ -2.16
CHD9-202ENST00000398510 Q5VV11 94 aa1.57□□□□□ -2.16
CHD9-202ENST00000398510 ANK3Q12955 4377 aaKnown RBP1.56□□□□□ -2.16
CHD9-202ENST00000398510 KRTAP26-1Q6PEX3 210 aa1.56□□□□□ -2.16
CHD9-202ENST00000398510 LCE2DQ5TA82 110 aaPredicted RBP1.56□□□□□ -2.16
CHD9-202ENST00000398510 A6NN06 94 aa1.55□□□□□ -2.16
CHD9-202ENST00000398510 KRTAP10-2P60368 255 aa1.55□□□□□ -2.16
CHD9-202ENST00000398510 KRTAP1-5Q9BYS1 174 aa1.55□□□□□ -2.16
CHD9-202ENST00000398510 PRAC1Q96KF2 57 aa1.55□□□□□ -2.16
CHD9-202ENST00000398510 KRTAP10-1P60331 282 aa1.55□□□□□ -2.16
CHD9-202ENST00000398510 KRTAP29-1A8MX34 341 aaPredicted RBP1.54□□□□□ -2.16
CHD9-202ENST00000398510 P0C880 135 aa1.53□□□□□ -2.16
CHD9-202ENST00000398510 KRTAP25-1Q3LHN0 102 aa1.53□□□□□ -2.16
CHD9-202ENST00000398510 MEGF8Q7Z7M0 2845 aa1.53□□□□□ -2.17
CHD9-202ENST00000398510 KRTAP13-1Q8IUC0 172 aa1.52□□□□□ -2.17
CHD9-202ENST00000398510 A0A0G2JQZ4 141 aa1.52□□□□□ -2.17
CHD9-202ENST00000398510 Q8NDZ9 215 aa1.52□□□□□ -2.17
CHD9-202ENST00000398510 A8MU10 97 aa1.52□□□□□ -2.17
CHD9-202ENST00000398510 H0YAA0 97 aa1.51□□□□□ -2.17
CHD9-202ENST00000398510 FRAS1Q86XX4 4008 aa1.51□□□□□ -2.17
CHD9-202ENST00000398510 KRTAP23-1A1A580 65 aa1.5□□□□□ -2.17
CHD9-202ENST00000398510 KRTAP17-1Q9BYP8 105 aa1.5□□□□□ -2.17
CHD9-202ENST00000398510 FBN3Q75N90 2809 aa1.5□□□□□ -2.17
CHD9-202ENST00000398510 XP32Q5T750 250 aa1.5□□□□□ -2.17
CHD9-202ENST00000398510 DNAH6Q9C0G6 4158 aa1.49□□□□□ -2.17
CHD9-202ENST00000398510 DNAH10Q8IVF4 4471 aa1.48□□□□□ -2.17
CHD9-202ENST00000398510 KMT2AQ03164 3969 aa1.48□□□□□ -2.17
CHD9-202ENST00000398510 NDUFAF8A1L188 74 aa1.47□□□□□ -2.17
CHD9-202ENST00000398510 DNHD1Q96M86 4753 aa1.46□□□□□ -2.17
CHD9-202ENST00000398510 KRTAP13-3Q3SY46 172 aa1.46□□□□□ -2.18
CHD9-202ENST00000398510 KRTAP13-2Q52LG2 175 aa1.46□□□□□ -2.18
CHD9-202ENST00000398510 ALMS1Q8TCU4 4167 aa1.46□□□□□ -2.18
CHD9-202ENST00000398510 PRKDCP78527 4128 aaKnown RBP1.46□□□□□ -2.18
CHD9-202ENST00000398510 KRTAP10-8P60410 259 aa1.46□□□□□ -2.18
CHD9-202ENST00000398510 DYNC2H1Q8NCM8 4307 aaKnown RBP1.45□□□□□ -2.18
CHD9-202ENST00000398510 VPS13BQ7Z7G8 4022 aa1.45□□□□□ -2.18
CHD9-202ENST00000398510 C10orf95Q9H7T3 257 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms