RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 HRCT1Q6UXD1 115 aa11.45□□□□□ -0.58
PDLIM2-204ENST00000397760 FP248Q71RG6 208 aaPredicted RBP11.45□□□□□ -0.58
PDLIM2-204ENST00000397760 DEFB116Q30KQ4 102 aa11.44□□□□□ -0.58
PDLIM2-204ENST00000397760 H3BPC8 53 aa11.43□□□□□ -0.58
PDLIM2-204ENST00000397760 MP68P56378 58 aa11.42□□□□□ -0.58
PDLIM2-204ENST00000397760 MOBPQ13875 183 aa11.42□□□□□ -0.58
PDLIM2-204ENST00000397760 FAM229BQ4G0N7 80 aa11.42□□□□□ -0.58
PDLIM2-204ENST00000397760 KRTAP17-1Q9BYP8 105 aa11.42□□□□□ -0.58
PDLIM2-204ENST00000397760 A0A087X002 238 aa11.41□□□□□ -0.58
PDLIM2-204ENST00000397760 WFDC13Q8IUB5 93 aa11.41□□□□□ -0.58
PDLIM2-204ENST00000397760 Q8N1X5 172 aa11.41□□□□□ -0.58
PDLIM2-204ENST00000397760 CASC2Q6XLA1 102 aa11.4□□□□□ -0.58
PDLIM2-204ENST00000397760 CYP4F30PQ9H0H9 118 aa11.38□□□□□ -0.59
PDLIM2-204ENST00000397760 KRTAP13-2Q52LG2 175 aa11.37□□□□□ -0.59
PDLIM2-204ENST00000397760 hDV103S1A0JD37 113 aa11.35□□□□□ -0.59
PDLIM2-204ENST00000397760 PKHD1L1Q86WI1 4243 aa11.35□□□□□ -0.59
PDLIM2-204ENST00000397760 SSBP3-AS1Q7Z2R9 100 aa11.34□□□□□ -0.59
PDLIM2-204ENST00000397760 TRAV22A0A0B4J277 110 aa11.32□□□□□ -0.6
PDLIM2-204ENST00000397760 PRR26Q8N8Z3 221 aa11.3□□□□□ -0.6
PDLIM2-204ENST00000397760 BIRC6Q9NR09 4857 aa11.29□□□□□ -0.6
PDLIM2-204ENST00000397760 SPANXA2-OT1Q8N9U9 137 aa11.29□□□□□ -0.6
PDLIM2-204ENST00000397760 MMP24-AS1A0A0U1RRL7 71 aa11.28□□□□□ -0.6
PDLIM2-204ENST00000397760 H0Y9P7 68 aa11.28□□□□□ -0.6
PDLIM2-204ENST00000397760 C1orf64Q8NEQ6 169 aa11.28□□□□□ -0.6
PDLIM2-204ENST00000397760 TYMSOSQ8TAI1 123 aa11.28□□□□□ -0.6
PDLIM2-204ENST00000397760 LINC00208Q96KT6 92 aa11.28□□□□□ -0.6
PDLIM2-204ENST00000397760 ASB16-AS1Q495Z4 193 aa11.27□□□□□ -0.61
PDLIM2-204ENST00000397760 Q96NJ1 140 aa11.27□□□□□ -0.61
PDLIM2-204ENST00000397760 TP53AIP1Q9HCN2 124 aa11.25□□□□□ -0.61
PDLIM2-204ENST00000397760 PRO0628Q9UI54 55 aa11.22□□□□□ -0.61
PDLIM2-204ENST00000397760 CD164Q04900 197 aa11.21□□□□□ -0.61
PDLIM2-204ENST00000397760 Q1T7F1 81 aa11.21□□□□□ -0.61
PDLIM2-204ENST00000397760 MPLKIPQ8TAP9 179 aa11.19□□□□□ -0.62
PDLIM2-204ENST00000397760 KRTAP4-5Q9BYR2 181 aa11.18□□□□□ -0.62
PDLIM2-204ENST00000397760 C8orf17Q9NRJ1 99 aa11.17□□□□□ -0.62
PDLIM2-204ENST00000397760 C4orf48Q5BLP8 95 aa11.16□□□□□ -0.62
PDLIM2-204ENST00000397760 A0A1B0GVX0 72 aa11.16□□□□□ -0.62
PDLIM2-204ENST00000397760 LINC00304Q8N9R0 145 aa11.14□□□□□ -0.63
PDLIM2-204ENST00000397760 V9GYY9 64 aa11.13□□□□□ -0.63
PDLIM2-204ENST00000397760 LRP1Q07954 4544 aaKnown RBP11.11□□□□□ -0.63
PDLIM2-204ENST00000397760 HERC2O95714 4834 aa11.11□□□□□ -0.63
PDLIM2-204ENST00000397760 SPINK1P00995 79 aa11.11□□□□□ -0.63
PDLIM2-204ENST00000397760 KRTAP10-8P60410 259 aa11.11□□□□□ -0.63
PDLIM2-204ENST00000397760 SPAG11AQ6PDA7 123 aa11.11□□□□□ -0.63
PDLIM2-204ENST00000397760 PRR4Q16378 134 aa11.1□□□□□ -0.63
PDLIM2-204ENST00000397760 FAT3Q8TDW7 4589 aa11.1□□□□□ -0.63
PDLIM2-204ENST00000397760 IGLV7-46A0A075B6I9 117 aa11.08□□□□□ -0.64
PDLIM2-204ENST00000397760 MRPL34Q9BQ48 92 aaKnown RBP11.07□□□□□ -0.64
PDLIM2-204ENST00000397760 FLG2Q5D862 2391 aaPredicted RBP11.06□□□□□ -0.64
PDLIM2-204ENST00000397760 IGHV6-1A0A0B4J1U7 121 aa11.06□□□□□ -0.64
PDLIM2-204ENST00000397760 LIMD2Q9BT23 127 aa11.06□□□□□ -0.64
PDLIM2-204ENST00000397760 TNXBP22105 4242 aa11.05□□□□□ -0.64
PDLIM2-204ENST00000397760 C1orf195Q5TG92 126 aa11.03□□□□□ -0.64
PDLIM2-204ENST00000397760 RPS29P62273 56 aaKnown RBP11.02□□□□□ -0.64
PDLIM2-204ENST00000397760 BRK1Q8WUW1 75 aa11.02□□□□□ -0.64
PDLIM2-204ENST00000397760 MYCBP2O75592 4640 aa11□□□□□ -0.65
PDLIM2-204ENST00000397760 MT1HL1P0DM35 61 aa11□□□□□ -0.65
PDLIM2-204ENST00000397760 ABCA13Q86UQ4 5058 aa10.97□□□□□ -0.65
PDLIM2-204ENST00000397760 NDUFS5O43920 106 aa10.97□□□□□ -0.65
PDLIM2-204ENST00000397760 C8orf87E5RJ46 101 aa10.96□□□□□ -0.65
PDLIM2-204ENST00000397760 LOC101927531A0A1B0GV80 90 aa10.92□□□□□ -0.66
PDLIM2-204ENST00000397760 COA5Q86WW8 74 aa10.92□□□□□ -0.66
PDLIM2-204ENST00000397760 Q8N9P0 234 aaPredicted RBP10.92□□□□□ -0.66
PDLIM2-204ENST00000397760 NOTCH2NLQ7Z3S9 236 aa10.91□□□□□ -0.66
PDLIM2-204ENST00000397760 PCOTHQ58A44 107 aa10.91□□□□□ -0.66
PDLIM2-204ENST00000397760 PSPHP1O15172 72 aa10.88□□□□□ -0.67
PDLIM2-204ENST00000397760 KRTAP13-3Q3SY46 172 aa10.86□□□□□ -0.67
PDLIM2-204ENST00000397760 A8MUN3 132 aa10.85□□□□□ -0.67
PDLIM2-204ENST00000397760 RETNLBQ9BQ08 111 aa10.84□□□□□ -0.67
PDLIM2-204ENST00000397760 Q5VV11 94 aa10.83□□□□□ -0.68
PDLIM2-204ENST00000397760 DMBT1Q9UGM3 2413 aaPredicted RBP10.82□□□□□ -0.68
PDLIM2-204ENST00000397760 J3QL48 77 aa10.81□□□□□ -0.68
PDLIM2-204ENST00000397760 LINC00313P59037 77 aa10.79□□□□□ -0.68
PDLIM2-204ENST00000397760 Q5W150 140 aa10.78□□□□□ -0.68
PDLIM2-204ENST00000397760 Q75L30 129 aa10.76□□□□□ -0.69
PDLIM2-204ENST00000397760 HRES1P13985 223 aa10.75□□□□□ -0.69
PDLIM2-204ENST00000397760 PRR15LQ9BU68 103 aa10.74□□□□□ -0.69
PDLIM2-204ENST00000397760 LINC01558Q9Y6Z2 57 aa10.74□□□□□ -0.69
PDLIM2-204ENST00000397760 CHKB-CPT1BH3BT56 60 aa10.71□□□□□ -0.69
PDLIM2-204ENST00000397760 PCLOQ9Y6V0 5065 aa10.69□□□□□ -0.7
PDLIM2-204ENST00000397760 ACYP2P14621 99 aa10.68□□□□□ -0.7
PDLIM2-204ENST00000397760 KRTAP16-1A8MUX0 517 aa10.64□□□□□ -0.71
PDLIM2-204ENST00000397760 IGKV2-30P06310 120 aa10.63□□□□□ -0.71
PDLIM2-204ENST00000397760 DMAC1Q96GE9 116 aa10.63□□□□□ -0.71
PDLIM2-204ENST00000397760 C9orf92A6NGG3 77 aa10.63□□□□□ -0.71
PDLIM2-204ENST00000397760 A6NED7 52 aa10.57□□□□□ -0.72
PDLIM2-204ENST00000397760 CDC42SE1Q9NRR8 79 aa10.54□□□□□ -0.72
PDLIM2-204ENST00000397760 ATP11AUNQ6ZP68 121 aa10.54□□□□□ -0.72
PDLIM2-204ENST00000397760 LCA10Q71F78 164 aa10.51□□□□□ -0.73
PDLIM2-204ENST00000397760 PMAIP1Q13794 54 aa10.48□□□□□ -0.73
PDLIM2-204ENST00000397760 A8MU10 97 aa10.47□□□□□ -0.73
PDLIM2-204ENST00000397760 TPRXLQ17RH7 258 aa10.46□□□□□ -0.74
PDLIM2-204ENST00000397760 C20orf166-AS1Q96NR2 134 aa10.45□□□□□ -0.74
PDLIM2-204ENST00000397760 A8MUU9 505 aa10.44□□□□□ -0.74
PDLIM2-204ENST00000397760 XP32Q5T750 250 aa10.42□□□□□ -0.74
PDLIM2-204ENST00000397760 SPINK7P58062 85 aa10.38□□□□□ -0.75
PDLIM2-204ENST00000397760 IGKV2D-30A0A075B6S6 120 aa10.37□□□□□ -0.75
PDLIM2-204ENST00000397760 HERC1Q15751 4861 aa10.37□□□□□ -0.75
PDLIM2-204ENST00000397760 SPTSSBQ8NFR3 76 aa10.36□□□□□ -0.75
PDLIM2-204ENST00000397760 C7orf65Q6ZTY9 151 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms