RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 DEFB116Q30KQ4 102 aa7.74□□□□□ -1.17
MCF2L-209ENST00000397036 NDUFB1O75438 58 aa7.73□□□□□ -1.17
MCF2L-209ENST00000397036 PRR15Q8IV56 129 aa7.73□□□□□ -1.17
MCF2L-209ENST00000397036 MYCBP2O75592 4640 aa7.72□□□□□ -1.17
MCF2L-209ENST00000397036 HIST1H4AP62805 103 aaKnown RBP7.7□□□□□ -1.18
MCF2L-209ENST00000397036 K7EQZ3 153 aa7.69□□□□□ -1.18
MCF2L-209ENST00000397036 Q8N9L7 120 aa7.68□□□□□ -1.18
MCF2L-209ENST00000397036 A0A1B0GVX0 72 aa7.68□□□□□ -1.18
MCF2L-209ENST00000397036 SCGB1A1P11684 91 aa7.67□□□□□ -1.18
MCF2L-209ENST00000397036 A0A087WVE0 104 aa7.64□□□□□ -1.19
MCF2L-209ENST00000397036 C8orf87E5RJ46 101 aa7.64□□□□□ -1.19
MCF2L-209ENST00000397036 FP248Q71RG6 208 aaPredicted RBP7.63□□□□□ -1.19
MCF2L-209ENST00000397036 ABCA13Q86UQ4 5058 aa7.63□□□□□ -1.19
MCF2L-209ENST00000397036 HCG22E2RYF7 251 aa7.62□□□□□ -1.19
MCF2L-209ENST00000397036 LORP23490 312 aaPredicted RBP7.62□□□□□ -1.19
MCF2L-209ENST00000397036 C8orf17Q9NRJ1 99 aa7.62□□□□□ -1.19
MCF2L-209ENST00000397036 IGHV6-1A0A0B4J1U7 121 aa7.61□□□□□ -1.19
MCF2L-209ENST00000397036 MMP24-AS1A0A0U1RRL7 71 aa7.6□□□□□ -1.19
MCF2L-209ENST00000397036 FAM236AA0A1B0GUQ0 79 aa7.59□□□□□ -1.19
MCF2L-209ENST00000397036 FAM236BA0A1B0GV22 79 aa7.59□□□□□ -1.19
MCF2L-209ENST00000397036 J3QL48 77 aa7.58□□□□□ -1.2
MCF2L-209ENST00000397036 LINC00313P59037 77 aa7.58□□□□□ -1.2
MCF2L-209ENST00000397036 hDV103S1A0JD37 113 aa7.57□□□□□ -1.2
MCF2L-209ENST00000397036 CASC2Q6XLA1 102 aa7.57□□□□□ -1.2
MCF2L-209ENST00000397036 NOTCH2NLQ7Z3S9 236 aa7.56□□□□□ -1.2
MCF2L-209ENST00000397036 TMEM254Q8TBM7 123 aa7.56□□□□□ -1.2
MCF2L-209ENST00000397036 RETNLBQ9BQ08 111 aa7.56□□□□□ -1.2
MCF2L-209ENST00000397036 ATOX1O00244 68 aa7.55□□□□□ -1.2
MCF2L-209ENST00000397036 WFDC13Q8IUB5 93 aa7.53□□□□□ -1.2
MCF2L-209ENST00000397036 SMIM20Q8N5G0 67 aa7.53□□□□□ -1.2
MCF2L-209ENST00000397036 MRPL34Q9BQ48 92 aaKnown RBP7.52□□□□□ -1.2
MCF2L-209ENST00000397036 IGLV7-46A0A075B6I9 117 aa7.51□□□□□ -1.21
MCF2L-209ENST00000397036 KRTAP16-1A8MUX0 517 aa7.51□□□□□ -1.21
MCF2L-209ENST00000397036 Q8N9P0 234 aaPredicted RBP7.5□□□□□ -1.21
MCF2L-209ENST00000397036 OCR1Q9BZK8 76 aa7.49□□□□□ -1.21
MCF2L-209ENST00000397036 TRAV7A0A075B6U4 112 aa7.47□□□□□ -1.21
MCF2L-209ENST00000397036 TP53AIP1Q9HCN2 124 aa7.47□□□□□ -1.21
MCF2L-209ENST00000397036 KRTAP13-3Q3SY46 172 aa7.46□□□□□ -1.22
MCF2L-209ENST00000397036 SERP2Q8N6R1 65 aa7.46□□□□□ -1.22
MCF2L-209ENST00000397036 PRR4Q16378 134 aa7.45□□□□□ -1.22
MCF2L-209ENST00000397036 UQCRQO14949 82 aa7.44□□□□□ -1.22
MCF2L-209ENST00000397036 ANAPC13Q9BS18 74 aa7.44□□□□□ -1.22
MCF2L-209ENST00000397036 PCLOQ9Y6V0 5065 aa7.43□□□□□ -1.22
MCF2L-209ENST00000397036 TPRXLQ17RH7 258 aa7.43□□□□□ -1.22
MCF2L-209ENST00000397036 C20orf166-AS1Q96NR2 134 aa7.43□□□□□ -1.22
MCF2L-209ENST00000397036 A8MUU9 505 aa7.42□□□□□ -1.22
MCF2L-209ENST00000397036 C9orf92A6NGG3 77 aa7.42□□□□□ -1.22
MCF2L-209ENST00000397036 NDUFS5O43920 106 aa7.4□□□□□ -1.22
MCF2L-209ENST00000397036 COX7CP15954 63 aa7.4□□□□□ -1.22
MCF2L-209ENST00000397036 C5orf47Q569G3 176 aa7.4□□□□□ -1.22
MCF2L-209ENST00000397036 Q75L30 129 aa7.4□□□□□ -1.22
MCF2L-209ENST00000397036 TRAV22A0A0B4J277 110 aa7.35□□□□□ -1.23
MCF2L-209ENST00000397036 H3BPC8 53 aa7.35□□□□□ -1.23
MCF2L-209ENST00000397036 XP32Q5T750 250 aa7.35□□□□□ -1.23
MCF2L-209ENST00000397036 PCP4P48539 62 aa7.34□□□□□ -1.23
MCF2L-209ENST00000397036 MP68P56378 58 aa7.32□□□□□ -1.24
MCF2L-209ENST00000397036 RPL37P61927 97 aaKnown RBP7.32□□□□□ -1.24
MCF2L-209ENST00000397036 Q5W150 140 aa7.32□□□□□ -1.24
MCF2L-209ENST00000397036 ZCCHC13Q8WW36 166 aaKnown RBP7.32□□□□□ -1.24
MCF2L-209ENST00000397036 H0Y9P7 68 aa7.31□□□□□ -1.24
MCF2L-209ENST00000397036 A0A0U1RQV1 116 aa7.28□□□□□ -1.24
MCF2L-209ENST00000397036 KLKP1Q107X0 134 aa7.28□□□□□ -1.24
MCF2L-209ENST00000397036 C20orf197Q8N268 126 aa7.27□□□□□ -1.25
MCF2L-209ENST00000397036 ATP11AUNQ6ZP68 121 aa7.27□□□□□ -1.25
MCF2L-209ENST00000397036 CCDC179H3BU77 68 aa7.26□□□□□ -1.25
MCF2L-209ENST00000397036 LINC00208Q96KT6 92 aa7.26□□□□□ -1.25
MCF2L-209ENST00000397036 LOC101927531A0A1B0GV80 90 aa7.25□□□□□ -1.25
MCF2L-209ENST00000397036 C1orf64Q8NEQ6 169 aa7.25□□□□□ -1.25
MCF2L-209ENST00000397036 HERC1Q15751 4861 aa7.24□□□□□ -1.25
MCF2L-209ENST00000397036 NDUFC1O43677 76 aa7.22□□□□□ -1.25
MCF2L-209ENST00000397036 IGKV2-30P06310 120 aa7.22□□□□□ -1.25
MCF2L-209ENST00000397036 CYP4F30PQ9H0H9 118 aa7.2□□□□□ -1.26
MCF2L-209ENST00000397036 SNURFQ9Y675 71 aa7.2□□□□□ -1.26
MCF2L-209ENST00000397036 LPAP08519 4548 aa7.19□□□□□ -1.26
MCF2L-209ENST00000397036 LRP2P98164 4655 aa7.19□□□□□ -1.26
MCF2L-209ENST00000397036 SEC61BP60468 96 aaKnown RBP7.17□□□□□ -1.26
MCF2L-209ENST00000397036 HMCN2Q8NDA2 5059 aa7.17□□□□□ -1.26
MCF2L-209ENST00000397036 C7orf65Q6ZTY9 151 aa7.17□□□□□ -1.26
MCF2L-209ENST00000397036 PCOTHQ58A44 107 aa7.15□□□□□ -1.27
MCF2L-209ENST00000397036 H7BZZ5 65 aa7.14□□□□□ -1.27
MCF2L-209ENST00000397036 CYSTM1Q9H1C7 97 aa7.14□□□□□ -1.27
MCF2L-209ENST00000397036 IGKV2D-30A0A075B6S6 120 aa7.13□□□□□ -1.27
MCF2L-209ENST00000397036 SPINK7P58062 85 aa7.13□□□□□ -1.27
MCF2L-209ENST00000397036 SPANXA2-OT1Q8N9U9 137 aa7.1□□□□□ -1.27
MCF2L-209ENST00000397036 KRTAP4-8Q9BYQ9 185 aa7.1□□□□□ -1.27
MCF2L-209ENST00000397036 MUC17Q685J3 4493 aa7.09□□□□□ -1.27
MCF2L-209ENST00000397036 TMEM258P61165 79 aa7.06□□□□□ -1.28
MCF2L-209ENST00000397036 HRES1P13985 223 aa7.05□□□□□ -1.28
MCF2L-209ENST00000397036 ATP5EP56381 51 aaPredicted RBP7.02□□□□□ -1.29
MCF2L-209ENST00000397036 MPLKIPQ8TAP9 179 aa6.99□□□□□ -1.29
MCF2L-209ENST00000397036 FAM236DA0A1B0GTK5 79 aa6.97□□□□□ -1.29
MCF2L-209ENST00000397036 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.97□□□□□ -1.29
MCF2L-209ENST00000397036 FAM236CP0DP71 79 aa6.97□□□□□ -1.29
MCF2L-209ENST00000397036 A8MUN3 132 aa6.96□□□□□ -1.29
MCF2L-209ENST00000397036 KRTAP9-2Q9BYQ4 174 aa6.96□□□□□ -1.29
MCF2L-209ENST00000397036 KRTAP4-1Q9BYQ7 146 aa6.96□□□□□ -1.29
MCF2L-209ENST00000397036 C4orf26Q17RF5 130 aa6.96□□□□□ -1.3
MCF2L-209ENST00000397036 COX6B2Q6YFQ2 88 aa6.96□□□□□ -1.3
MCF2L-209ENST00000397036 DMAC1Q96GE9 116 aa6.96□□□□□ -1.3
MCF2L-209ENST00000397036 KRTAP9-6A0A140TA67 174 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms