RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 HERC2O95714 4834 aa8.81□□□□□ -1
TM9SF1-202ENST00000396854 FAM229BQ4G0N7 80 aa8.79□□□□□ -1
TM9SF1-202ENST00000396854 KRTAP29-1A8MX34 341 aaPredicted RBP8.78□□□□□ -1
TM9SF1-202ENST00000396854 WFDC13Q8IUB5 93 aa8.78□□□□□ -1
TM9SF1-202ENST00000396854 KRTAP4-5Q9BYR2 181 aa8.78□□□□□ -1
TM9SF1-202ENST00000396854 ANAPC11Q9NYG5 84 aa8.78□□□□□ -1
TM9SF1-202ENST00000396854 LINC00472Q9H8W2 130 aa8.77□□□□□ -1.01
TM9SF1-202ENST00000396854 PRR15Q8IV56 129 aa8.76□□□□□ -1.01
TM9SF1-202ENST00000396854 A8MWP4 228 aa8.75□□□□□ -1.01
TM9SF1-202ENST00000396854 A0A087X002 238 aa8.74□□□□□ -1.01
TM9SF1-202ENST00000396854 hDV103S1A0JD37 113 aa8.74□□□□□ -1.01
TM9SF1-202ENST00000396854 CASC2Q6XLA1 102 aa8.73□□□□□ -1.01
TM9SF1-202ENST00000396854 NDUFB1O75438 58 aa8.72□□□□□ -1.01
TM9SF1-202ENST00000396854 MP68P56378 58 aa8.72□□□□□ -1.01
TM9SF1-202ENST00000396854 KRTAP13-2Q52LG2 175 aa8.71□□□□□ -1.01
TM9SF1-202ENST00000396854 CYP4F30PQ9H0H9 118 aa8.71□□□□□ -1.01
TM9SF1-202ENST00000396854 IGLV9-49A0A0B4J1Y8 123 aa8.71□□□□□ -1.02
TM9SF1-202ENST00000396854 C1orf64Q8NEQ6 169 aa8.69□□□□□ -1.02
TM9SF1-202ENST00000396854 TRAV22A0A0B4J277 110 aa8.69□□□□□ -1.02
TM9SF1-202ENST00000396854 H3BPC8 53 aa8.69□□□□□ -1.02
TM9SF1-202ENST00000396854 MOBPQ13875 183 aa8.69□□□□□ -1.02
TM9SF1-202ENST00000396854 PRR26Q8N8Z3 221 aa8.69□□□□□ -1.02
TM9SF1-202ENST00000396854 FAT3Q8TDW7 4589 aa8.68□□□□□ -1.02
TM9SF1-202ENST00000396854 MPLKIPQ8TAP9 179 aa8.67□□□□□ -1.02
TM9SF1-202ENST00000396854 LRP1Q07954 4544 aaKnown RBP8.67□□□□□ -1.02
TM9SF1-202ENST00000396854 SSBP3-AS1Q7Z2R9 100 aa8.66□□□□□ -1.02
TM9SF1-202ENST00000396854 PRO0628Q9UI54 55 aa8.66□□□□□ -1.02
TM9SF1-202ENST00000396854 H0Y9P7 68 aa8.66□□□□□ -1.02
TM9SF1-202ENST00000396854 LINC00208Q96KT6 92 aa8.66□□□□□ -1.02
TM9SF1-202ENST00000396854 FLG2Q5D862 2391 aaPredicted RBP8.66□□□□□ -1.02
TM9SF1-202ENST00000396854 MMP24-AS1A0A0U1RRL7 71 aa8.65□□□□□ -1.02
TM9SF1-202ENST00000396854 TYMSOSQ8TAI1 123 aa8.65□□□□□ -1.02
TM9SF1-202ENST00000396854 Q96NJ1 140 aa8.64□□□□□ -1.03
TM9SF1-202ENST00000396854 MYCBP2O75592 4640 aa8.64□□□□□ -1.03
TM9SF1-202ENST00000396854 KRTAP10-8P60410 259 aa8.63□□□□□ -1.03
TM9SF1-202ENST00000396854 ABCA13Q86UQ4 5058 aa8.62□□□□□ -1.03
TM9SF1-202ENST00000396854 SPANXA2-OT1Q8N9U9 137 aa8.62□□□□□ -1.03
TM9SF1-202ENST00000396854 TNXBP22105 4242 aa8.61□□□□□ -1.03
TM9SF1-202ENST00000396854 Q1T7F1 81 aa8.61□□□□□ -1.03
TM9SF1-202ENST00000396854 PRR4Q16378 134 aa8.6□□□□□ -1.03
TM9SF1-202ENST00000396854 ASB16-AS1Q495Z4 193 aa8.6□□□□□ -1.03
TM9SF1-202ENST00000396854 MT1HL1P0DM35 61 aa8.58□□□□□ -1.04
TM9SF1-202ENST00000396854 CD164Q04900 197 aa8.57□□□□□ -1.04
TM9SF1-202ENST00000396854 LINC00304Q8N9R0 145 aa8.57□□□□□ -1.04
TM9SF1-202ENST00000396854 TP53AIP1Q9HCN2 124 aa8.55□□□□□ -1.04
TM9SF1-202ENST00000396854 C8orf17Q9NRJ1 99 aa8.55□□□□□ -1.04
TM9SF1-202ENST00000396854 SPAG11AQ6PDA7 123 aa8.54□□□□□ -1.04
TM9SF1-202ENST00000396854 BRK1Q8WUW1 75 aa8.54□□□□□ -1.04
TM9SF1-202ENST00000396854 C4orf48Q5BLP8 95 aa8.52□□□□□ -1.05
TM9SF1-202ENST00000396854 A0A1B0GVX0 72 aa8.52□□□□□ -1.05
TM9SF1-202ENST00000396854 SPINK1P00995 79 aa8.52□□□□□ -1.05
TM9SF1-202ENST00000396854 RPS29P62273 56 aaKnown RBP8.5□□□□□ -1.05
TM9SF1-202ENST00000396854 V9GYY9 64 aa8.49□□□□□ -1.05
TM9SF1-202ENST00000396854 IGLV7-46A0A075B6I9 117 aa8.47□□□□□ -1.05
TM9SF1-202ENST00000396854 IGHV6-1A0A0B4J1U7 121 aa8.47□□□□□ -1.05
TM9SF1-202ENST00000396854 LIMD2Q9BT23 127 aa8.46□□□□□ -1.05
TM9SF1-202ENST00000396854 J3QL48 77 aa8.45□□□□□ -1.06
TM9SF1-202ENST00000396854 MRPL34Q9BQ48 92 aaKnown RBP8.45□□□□□ -1.06
TM9SF1-202ENST00000396854 PSPHP1O15172 72 aa8.43□□□□□ -1.06
TM9SF1-202ENST00000396854 PCLOQ9Y6V0 5065 aa8.42□□□□□ -1.06
TM9SF1-202ENST00000396854 NDUFS5O43920 106 aa8.42□□□□□ -1.06
TM9SF1-202ENST00000396854 C1orf195Q5TG92 126 aa8.42□□□□□ -1.06
TM9SF1-202ENST00000396854 DMBT1Q9UGM3 2413 aaPredicted RBP8.41□□□□□ -1.06
TM9SF1-202ENST00000396854 PCOTHQ58A44 107 aa8.4□□□□□ -1.06
TM9SF1-202ENST00000396854 NOTCH2NLQ7Z3S9 236 aa8.4□□□□□ -1.06
TM9SF1-202ENST00000396854 COA5Q86WW8 74 aa8.4□□□□□ -1.06
TM9SF1-202ENST00000396854 Q8N9P0 234 aaPredicted RBP8.4□□□□□ -1.06
TM9SF1-202ENST00000396854 A8MUN3 132 aa8.39□□□□□ -1.07
TM9SF1-202ENST00000396854 Q5VV11 94 aa8.36□□□□□ -1.07
TM9SF1-202ENST00000396854 LOC101927531A0A1B0GV80 90 aa8.33□□□□□ -1.08
TM9SF1-202ENST00000396854 KRTAP13-3Q3SY46 172 aa8.33□□□□□ -1.08
TM9SF1-202ENST00000396854 C8orf87E5RJ46 101 aa8.31□□□□□ -1.08
TM9SF1-202ENST00000396854 RETNLBQ9BQ08 111 aa8.31□□□□□ -1.08
TM9SF1-202ENST00000396854 PRR15LQ9BU68 103 aa8.3□□□□□ -1.08
TM9SF1-202ENST00000396854 Q5W150 140 aa8.29□□□□□ -1.08
TM9SF1-202ENST00000396854 HRES1P13985 223 aa8.27□□□□□ -1.09
TM9SF1-202ENST00000396854 Q75L30 129 aa8.27□□□□□ -1.09
TM9SF1-202ENST00000396854 CHKB-CPT1BH3BT56 60 aa8.26□□□□□ -1.09
TM9SF1-202ENST00000396854 LINC01558Q9Y6Z2 57 aa8.24□□□□□ -1.09
TM9SF1-202ENST00000396854 LINC00313P59037 77 aa8.21□□□□□ -1.1
TM9SF1-202ENST00000396854 A8MU10 97 aa8.18□□□□□ -1.1
TM9SF1-202ENST00000396854 HERC1Q15751 4861 aa8.17□□□□□ -1.1
TM9SF1-202ENST00000396854 A6NED7 52 aa8.15□□□□□ -1.11
TM9SF1-202ENST00000396854 KRTAP16-1A8MUX0 517 aa8.14□□□□□ -1.11
TM9SF1-202ENST00000396854 ACYP2P14621 99 aa8.14□□□□□ -1.11
TM9SF1-202ENST00000396854 TPRXLQ17RH7 258 aa8.14□□□□□ -1.11
TM9SF1-202ENST00000396854 LCA10Q71F78 164 aa8.14□□□□□ -1.11
TM9SF1-202ENST00000396854 DMAC1Q96GE9 116 aa8.13□□□□□ -1.11
TM9SF1-202ENST00000396854 IGKV2-30P06310 120 aa8.12□□□□□ -1.11
TM9SF1-202ENST00000396854 CDC42SE1Q9NRR8 79 aa8.1□□□□□ -1.11
TM9SF1-202ENST00000396854 PMAIP1Q13794 54 aa8.1□□□□□ -1.11
TM9SF1-202ENST00000396854 C9orf92A6NGG3 77 aa8.09□□□□□ -1.11
TM9SF1-202ENST00000396854 ATP11AUNQ6ZP68 121 aa8.09□□□□□ -1.11
TM9SF1-202ENST00000396854 LPAP08519 4548 aa8.05□□□□□ -1.12
TM9SF1-202ENST00000396854 HMCN2Q8NDA2 5059 aa8.04□□□□□ -1.12
TM9SF1-202ENST00000396854 SPINK7P58062 85 aa8.04□□□□□ -1.12
TM9SF1-202ENST00000396854 XP32Q5T750 250 aa8.02□□□□□ -1.12
TM9SF1-202ENST00000396854 SPTSSBQ8NFR3 76 aa8.02□□□□□ -1.12
TM9SF1-202ENST00000396854 C20orf166-AS1Q96NR2 134 aa8□□□□□ -1.13
TM9SF1-202ENST00000396854 A8MUU9 505 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms