RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 RETNLBQ9BQ08 111 aa5.96□□□□□ -1.46
TRIM39-203ENST00000396547 VPS13DQ5THJ4 4388 aa5.95□□□□□ -1.46
TRIM39-203ENST00000396547 PLECQ15149 4684 aaKnown RBP5.95□□□□□ -1.46
TRIM39-203ENST00000396547 SACSQ9NZJ4 4579 aa5.94□□□□□ -1.46
TRIM39-203ENST00000396547 SPRR1BP22528 89 aa5.94□□□□□ -1.46
TRIM39-203ENST00000396547 C7orf65Q6ZTY9 151 aa5.94□□□□□ -1.46
TRIM39-203ENST00000396547 LINC01558Q9Y6Z2 57 aa5.94□□□□□ -1.46
TRIM39-203ENST00000396547 TP53AIP1Q9HCN2 124 aa5.94□□□□□ -1.46
TRIM39-203ENST00000396547 STARD9Q9P2P6 4700 aa5.93□□□□□ -1.46
TRIM39-203ENST00000396547 Q96NJ1 140 aa5.93□□□□□ -1.46
TRIM39-203ENST00000396547 NUPR2A6NF83 97 aa5.92□□□□□ -1.46
TRIM39-203ENST00000396547 RYR2Q92736 4967 aa5.92□□□□□ -1.46
TRIM39-203ENST00000396547 MRPL34Q9BQ48 92 aaKnown RBP5.92□□□□□ -1.46
TRIM39-203ENST00000396547 A0A1B0GVX0 72 aa5.92□□□□□ -1.46
TRIM39-203ENST00000396547 PRAC1Q96KF2 57 aa5.92□□□□□ -1.46
TRIM39-203ENST00000396547 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.9□□□□□ -1.47
TRIM39-203ENST00000396547 C14orf177Q52M58 125 aa5.9□□□□□ -1.47
TRIM39-203ENST00000396547 Q5W150 140 aa5.89□□□□□ -1.47
TRIM39-203ENST00000396547 Q6ZR54 194 aa5.88□□□□□ -1.47
TRIM39-203ENST00000396547 DNAH17Q9UFH2 4485 aa5.87□□□□□ -1.47
TRIM39-203ENST00000396547 CIRBP-AS1Q8TBR5 109 aa5.87□□□□□ -1.47
TRIM39-203ENST00000396547 ADM2Q7Z4H4 148 aa5.87□□□□□ -1.47
TRIM39-203ENST00000396547 APLNQ9ULZ1 77 aa5.85□□□□□ -1.47
TRIM39-203ENST00000396547 LINC00313P59037 77 aa5.84□□□□□ -1.47
TRIM39-203ENST00000396547 KRTAP13-1Q8IUC0 172 aa5.84□□□□□ -1.47
TRIM39-203ENST00000396547 PLAC8Q9NZF1 115 aa5.84□□□□□ -1.47
TRIM39-203ENST00000396547 ASB16-AS1Q495Z4 193 aa5.83□□□□□ -1.48
TRIM39-203ENST00000396547 PSORS1C2Q9UIG4 136 aa5.83□□□□□ -1.48
TRIM39-203ENST00000396547 KMT2CQ8NEZ4 4911 aaKnown RBP5.83□□□□□ -1.48
TRIM39-203ENST00000396547 LINC01554Q52M75 96 aa5.83□□□□□ -1.48
TRIM39-203ENST00000396547 ACYP2P14621 99 aa5.81□□□□□ -1.48
TRIM39-203ENST00000396547 RYR3Q15413 4870 aa5.81□□□□□ -1.48
TRIM39-203ENST00000396547 FRAS1Q86XX4 4008 aa5.8□□□□□ -1.48
TRIM39-203ENST00000396547 NBDYA0A0U1RRE5 68 aa5.8□□□□□ -1.48
TRIM39-203ENST00000396547 A0A1B0GU69 56 aa5.8□□□□□ -1.48
TRIM39-203ENST00000396547 DNAH2Q9P225 4427 aa5.79□□□□□ -1.48
TRIM39-203ENST00000396547 ZNF706Q9Y5V0 76 aaPredicted RBP5.79□□□□□ -1.48
TRIM39-203ENST00000396547 SPACA4Q8TDM5 124 aa5.78□□□□□ -1.48
TRIM39-203ENST00000396547 KMT2AQ03164 3969 aa5.77□□□□□ -1.49
TRIM39-203ENST00000396547 HYDINQ4G0P3 5121 aa5.76□□□□□ -1.49
TRIM39-203ENST00000396547 ZNF861PO60384 105 aa5.76□□□□□ -1.49
TRIM39-203ENST00000396547 LINC00483Q53H64 154 aa5.75□□□□□ -1.49
TRIM39-203ENST00000396547 IGKV2D-30A0A075B6S6 120 aa5.75□□□□□ -1.49
TRIM39-203ENST00000396547 IGLV5-52A0A0A0MRZ9 124 aa5.75□□□□□ -1.49
TRIM39-203ENST00000396547 SPINK1P00995 79 aa5.75□□□□□ -1.49
TRIM39-203ENST00000396547 IGKV2-30P06310 120 aa5.75□□□□□ -1.49
TRIM39-203ENST00000396547 RTL8CO15255 209 aa5.74□□□□□ -1.49
TRIM39-203ENST00000396547 FAT2Q9NYQ8 4349 aa5.73□□□□□ -1.49
TRIM39-203ENST00000396547 A0A087WTM6 91 aa5.72□□□□□ -1.49
TRIM39-203ENST00000396547 DYNC1H1Q14204 4646 aaKnown RBP5.72□□□□□ -1.49
TRIM39-203ENST00000396547 Q6ZRN7 208 aaPredicted RBP5.72□□□□□ -1.49
TRIM39-203ENST00000396547 MIR22HGQ0VDD5 57 aa5.71□□□□□ -1.49
TRIM39-203ENST00000396547 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
TRIM39-203ENST00000396547 HECTD4Q9Y4D8 3996 aa5.69□□□□□ -1.5
TRIM39-203ENST00000396547 DMAC1Q96GE9 116 aa5.69□□□□□ -1.5
TRIM39-203ENST00000396547 DNAH8Q96JB1 4490 aa5.68□□□□□ -1.5
TRIM39-203ENST00000396547 UQCR11O14957 56 aa5.68□□□□□ -1.5
TRIM39-203ENST00000396547 BIRC6Q9NR09 4857 aa5.67□□□□□ -1.5
TRIM39-203ENST00000396547 FAM229AH3BQW9 127 aa5.67□□□□□ -1.5
TRIM39-203ENST00000396547 DNAH11Q96DT5 4516 aa5.67□□□□□ -1.5
TRIM39-203ENST00000396547 A0A1B0GVY2 172 aa5.66□□□□□ -1.5
TRIM39-203ENST00000396547 IGLV7-43P04211 117 aa5.66□□□□□ -1.5
TRIM39-203ENST00000396547 PKD1P98161 4303 aa5.66□□□□□ -1.5
TRIM39-203ENST00000396547 CSAG1Q6PB30 78 aa5.66□□□□□ -1.5
TRIM39-203ENST00000396547 PLA2G1BP04054 148 aaKnown RBP5.65□□□□□ -1.5
TRIM39-203ENST00000396547 SPATA8Q6RVD6 105 aa5.65□□□□□ -1.51
TRIM39-203ENST00000396547 LY6G6CO95867 125 aa5.64□□□□□ -1.51
TRIM39-203ENST00000396547 Q8N1X5 172 aa5.63□□□□□ -1.51
TRIM39-203ENST00000396547 FLG2Q5D862 2391 aaPredicted RBP5.62□□□□□ -1.51
TRIM39-203ENST00000396547 SSBP3-AS1Q7Z2R9 100 aa5.6□□□□□ -1.51
TRIM39-203ENST00000396547 C1orf134Q5TEV5 83 aa5.57□□□□□ -1.52
TRIM39-203ENST00000396547 EPPK1P58107 5090 aaKnown RBP5.57□□□□□ -1.52
TRIM39-203ENST00000396547 KRTAP13-2Q52LG2 175 aa5.56□□□□□ -1.52
TRIM39-203ENST00000396547 A0A0A0MQY5 61 aa5.55□□□□□ -1.52
TRIM39-203ENST00000396547 HERC2O95714 4834 aa5.54□□□□□ -1.52
TRIM39-203ENST00000396547 DNAH5Q8TE73 4624 aa5.53□□□□□ -1.52
TRIM39-203ENST00000396547 CRIPTQ9P021 101 aa5.53□□□□□ -1.52
TRIM39-203ENST00000396547 KRTAP10-2P60368 255 aa5.52□□□□□ -1.53
TRIM39-203ENST00000396547 KRTAP16-1A8MUX0 517 aa5.51□□□□□ -1.53
TRIM39-203ENST00000396547 PKHD1P08F94 4074 aa5.51□□□□□ -1.53
TRIM39-203ENST00000396547 VPS13BQ7Z7G8 4022 aa5.5□□□□□ -1.53
TRIM39-203ENST00000396547 PKHD1L1Q86WI1 4243 aa5.49□□□□□ -1.53
TRIM39-203ENST00000396547 APOBP04114 4563 aaKnown RBP5.49□□□□□ -1.53
TRIM39-203ENST00000396547 DMBT1Q9UGM3 2413 aaPredicted RBP5.48□□□□□ -1.53
TRIM39-203ENST00000396547 RYR1P21817 5038 aa5.47□□□□□ -1.53
TRIM39-203ENST00000396547 LRP1BQ9NZR2 4599 aa5.47□□□□□ -1.53
TRIM39-203ENST00000396547 TYMSOSQ8TAI1 123 aa5.47□□□□□ -1.53
TRIM39-203ENST00000396547 C9orf92A6NGG3 77 aa5.46□□□□□ -1.54
TRIM39-203ENST00000396547 Q6ZSA8 131 aa5.45□□□□□ -1.54
TRIM39-203ENST00000396547 HSPG2P98160 4391 aa5.45□□□□□ -1.54
TRIM39-203ENST00000396547 ROMO1P60602 79 aa5.44□□□□□ -1.54
TRIM39-203ENST00000396547 H0YAA0 97 aa5.43□□□□□ -1.54
TRIM39-203ENST00000396547 KRTAP10-1P60331 282 aa5.43□□□□□ -1.54
TRIM39-203ENST00000396547 A0A1B0GU33 70 aa5.41□□□□□ -1.54
TRIM39-203ENST00000396547 LINC00304Q8N9R0 145 aa5.4□□□□□ -1.54
TRIM39-203ENST00000396547 KRTAP1-4P0C5Y4 121 aa5.39□□□□□ -1.55
TRIM39-203ENST00000396547 A8MUU9 505 aa5.37□□□□□ -1.55
TRIM39-203ENST00000396547 KRTAP25-1Q3LHN0 102 aa5.37□□□□□ -1.55
TRIM39-203ENST00000396547 P0C880 135 aa5.35□□□□□ -1.55
TRIM39-203ENST00000396547 SMR3BP02814 79 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms