RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 WNK1Q9H4A3 2382 aa1.79□□□□□ -2.12
HMGB1P10-201ENST00000395823 MEGF8Q7Z7M0 2845 aa1.79□□□□□ -2.12
HMGB1P10-201ENST00000395823 ETDCA0A1B0GVM5 59 aa1.79□□□□□ -2.12
HMGB1P10-201ENST00000395823 M0R1W7 72 aa1.79□□□□□ -2.12
HMGB1P10-201ENST00000395823 ZANQ9Y493 2812 aa1.78□□□□□ -2.12
HMGB1P10-201ENST00000395823 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.78□□□□□ -2.12
HMGB1P10-201ENST00000395823 IGIPA6NJ69 53 aa1.78□□□□□ -2.12
HMGB1P10-201ENST00000395823 H0YGX0 51 aa1.78□□□□□ -2.12
HMGB1P10-201ENST00000395823 ARL14EPLP0DKL9 152 aa1.78□□□□□ -2.12
HMGB1P10-201ENST00000395823 I3L3M4 83 aa1.77□□□□□ -2.13
HMGB1P10-201ENST00000395823 ANGP03950 147 aaKnown RBP1.77□□□□□ -2.13
HMGB1P10-201ENST00000395823 DEFB124Q8NES8 71 aa1.77□□□□□ -2.13
HMGB1P10-201ENST00000395823 NCOA6Q14686 2063 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P10-201ENST00000395823 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
HMGB1P10-201ENST00000395823 CRIPTQ9P021 101 aa1.76□□□□□ -2.13
HMGB1P10-201ENST00000395823 MUC2Q02817 5179 aa1.76□□□□□ -2.13
HMGB1P10-201ENST00000395823 ACANP16112 2415 aa1.75□□□□□ -2.13
HMGB1P10-201ENST00000395823 DEFB131BA0A096LNP1 70 aa1.75□□□□□ -2.13
HMGB1P10-201ENST00000395823 LINC01546A6NGU7 62 aa1.75□□□□□ -2.13
HMGB1P10-201ENST00000395823 ANK2Q01484 3957 aa1.75□□□□□ -2.13
HMGB1P10-201ENST00000395823 NSD1Q96L73 2696 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P10-201ENST00000395823 COX6B1P14854 86 aa1.74□□□□□ -2.13
HMGB1P10-201ENST00000395823 USMG5Q96IX5 58 aa1.74□□□□□ -2.13
HMGB1P10-201ENST00000395823 VPS13CQ709C8 3753 aa1.74□□□□□ -2.13
HMGB1P10-201ENST00000395823 HERC1Q15751 4861 aa1.73□□□□□ -2.13
HMGB1P10-201ENST00000395823 DEFB119Q8N690 84 aa1.73□□□□□ -2.13
HMGB1P10-201ENST00000395823 SVEP1Q4LDE5 3571 aa1.72□□□□□ -2.13
HMGB1P10-201ENST00000395823 ABCA13Q86UQ4 5058 aa1.72□□□□□ -2.13
HMGB1P10-201ENST00000395823 PIGYQ3MUY2 71 aa1.71□□□□□ -2.14
HMGB1P10-201ENST00000395823 COX6B2Q6YFQ2 88 aa1.71□□□□□ -2.14
HMGB1P10-201ENST00000395823 TENM3Q9P273 2699 aa1.71□□□□□ -2.14
HMGB1P10-201ENST00000395823 MXRA5Q9NR99 2828 aa1.71□□□□□ -2.14
HMGB1P10-201ENST00000395823 SONP18583 2426 aaKnown RBP1.7□□□□□ -2.14
HMGB1P10-201ENST00000395823 F5P12259 2224 aa1.7□□□□□ -2.14
HMGB1P10-201ENST00000395823 SNRPGP62308 76 aaKnown RBP1.7□□□□□ -2.14
HMGB1P10-201ENST00000395823 ABCA1O95477 2261 aa1.7□□□□□ -2.14
HMGB1P10-201ENST00000395823 ASCC3Q8N3C0 2202 aaKnown RBP1.7□□□□□ -2.14
HMGB1P10-201ENST00000395823 PRKDCP78527 4128 aaKnown RBP1.69□□□□□ -2.14
HMGB1P10-201ENST00000395823 TMEM167BQ9NRX6 74 aa1.69□□□□□ -2.14
HMGB1P10-201ENST00000395823 TIMM8BQ9Y5J9 83 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P10-201ENST00000395823 TENM2Q9NT68 2774 aa1.68□□□□□ -2.14
HMGB1P10-201ENST00000395823 CCL22O00626 93 aa1.68□□□□□ -2.14
HMGB1P10-201ENST00000395823 Q6ZSA8 131 aa1.68□□□□□ -2.14
HMGB1P10-201ENST00000395823 TP53AIP1Q9HCN2 124 aa1.68□□□□□ -2.14
HMGB1P10-201ENST00000395823 ZNF469Q96JG9 3925 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P10-201ENST00000395823 PLXNB2O15031 1838 aa1.68□□□□□ -2.14
HMGB1P10-201ENST00000395823 MAP1AP78559 2803 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P10-201ENST00000395823 TNCP24821 2201 aa1.67□□□□□ -2.14
HMGB1P10-201ENST00000395823 SPINK4O60575 86 aa1.67□□□□□ -2.14
HMGB1P10-201ENST00000395823 NDUFA3O95167 84 aa1.67□□□□□ -2.14
HMGB1P10-201ENST00000395823 LYNX1P0DP58 116 aa1.67□□□□□ -2.14
HMGB1P10-201ENST00000395823 K7EIL1 84 aa1.66□□□□□ -2.14
HMGB1P10-201ENST00000395823 K7EQZ3 153 aa1.66□□□□□ -2.14
HMGB1P10-201ENST00000395823 CRIP1P50238 77 aa1.66□□□□□ -2.14
HMGB1P10-201ENST00000395823 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
HMGB1P10-201ENST00000395823 CACNA1CQ13936 2221 aa1.66□□□□□ -2.14
HMGB1P10-201ENST00000395823 LINC00158P58513 81 aa1.65□□□□□ -2.15
HMGB1P10-201ENST00000395823 Q8IZM0 81 aa1.64□□□□□ -2.15
HMGB1P10-201ENST00000395823 SMR3AQ99954 134 aa1.64□□□□□ -2.15
HMGB1P10-201ENST00000395823 MRPL34Q9BQ48 92 aaKnown RBP1.64□□□□□ -2.15
HMGB1P10-201ENST00000395823 CNFNQ9BYD5 112 aa1.64□□□□□ -2.15
HMGB1P10-201ENST00000395823 CDKN2A-AS1Q9UH64 79 aa1.64□□□□□ -2.15
HMGB1P10-201ENST00000395823 TACC2O95359 2948 aa1.64□□□□□ -2.15
HMGB1P10-201ENST00000395823 SACSQ9NZJ4 4579 aa1.63□□□□□ -2.15
HMGB1P10-201ENST00000395823 GOLGA4Q13439 2230 aaKnown RBP1.63□□□□□ -2.15
HMGB1P10-201ENST00000395823 TRRAPQ9Y4A5 3859 aa1.62□□□□□ -2.15
HMGB1P10-201ENST00000395823 LYNX1G3V0Z9 82 aa1.62□□□□□ -2.15
HMGB1P10-201ENST00000395823 CNTRLQ7Z7A1 2325 aa1.61□□□□□ -2.15
HMGB1P10-201ENST00000395823 I3L2K1 104 aa1.61□□□□□ -2.15
HMGB1P10-201ENST00000395823 KRTAP10-4P60372 401 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P10-201ENST00000395823 SPINK9Q5DT21 86 aa1.6□□□□□ -2.15
HMGB1P10-201ENST00000395823 LINC00308Q8TCZ7 52 aa1.6□□□□□ -2.15
HMGB1P10-201ENST00000395823 CRCT1Q9UGL9 99 aa1.6□□□□□ -2.15
HMGB1P10-201ENST00000395823 KNTC1P50748 2209 aa1.59□□□□□ -2.15
HMGB1P10-201ENST00000395823 DYNC2H1Q8NCM8 4307 aaKnown RBP1.59□□□□□ -2.16
HMGB1P10-201ENST00000395823 COL7A1Q02388 2944 aa1.59□□□□□ -2.16
HMGB1P10-201ENST00000395823 FAT4Q6V0I7 4981 aa1.59□□□□□ -2.16
HMGB1P10-201ENST00000395823 DNAH1Q9P2D7 4330 aa1.58□□□□□ -2.16
HMGB1P10-201ENST00000395823 CADP27708 2225 aa1.58□□□□□ -2.16
HMGB1P10-201ENST00000395823 PKDREJQ9NTG1 2253 aa1.58□□□□□ -2.16
HMGB1P10-201ENST00000395823 COX6A2Q02221 97 aa1.58□□□□□ -2.16
HMGB1P10-201ENST00000395823 MINOS1Q5TGZ0 78 aa1.57□□□□□ -2.16
HMGB1P10-201ENST00000395823 SMIM2Q9BVW6 85 aa1.57□□□□□ -2.16
HMGB1P10-201ENST00000395823 FSIP2Q5CZC0 6907 aa1.57□□□□□ -2.16
HMGB1P10-201ENST00000395823 FLG2Q5D862 2391 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P10-201ENST00000395823 PRO0255Q9UI72 69 aa1.56□□□□□ -2.16
HMGB1P10-201ENST00000395823 RPS27LQ71UM5 84 aaKnown RBP1.55□□□□□ -2.16
HMGB1P10-201ENST00000395823 C6orf48Q9UBA6 75 aa1.54□□□□□ -2.16
HMGB1P10-201ENST00000395823 STAB2Q8WWQ8 2551 aa1.54□□□□□ -2.16
HMGB1P10-201ENST00000395823 RNF213Q63HN8 5207 aa1.54□□□□□ -2.16
HMGB1P10-201ENST00000395823 AKAP6Q13023 2319 aa1.54□□□□□ -2.16
HMGB1P10-201ENST00000395823 C10orf95Q9H7T3 257 aa1.53□□□□□ -2.16
HMGB1P10-201ENST00000395823 HECTD4Q9Y4D8 3996 aa1.53□□□□□ -2.16
HMGB1P10-201ENST00000395823 DMBT1Q9UGM3 2413 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P10-201ENST00000395823 CMYA5Q8N3K9 4069 aa1.52□□□□□ -2.17
HMGB1P10-201ENST00000395823 NDUFA1O15239 70 aa1.52□□□□□ -2.17
HMGB1P10-201ENST00000395823 Q5VSD8 79 aa1.52□□□□□ -2.17
HMGB1P10-201ENST00000395823 FRAS1Q86XX4 4008 aa1.51□□□□□ -2.17
HMGB1P10-201ENST00000395823 ANK3Q12955 4377 aaKnown RBP1.51□□□□□ -2.17
HMGB1P10-201ENST00000395823 H0YAA0 97 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms