RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 A0A1B0GV72 72 aa8.25□□□□□ -1.09
CXCL12-206ENST00000395795 MTURNQ8N3F0 131 aa8.25□□□□□ -1.09
CXCL12-206ENST00000395795 DSCR8Q96T75 97 aa8.25□□□□□ -1.09
CXCL12-206ENST00000395795 NOTCH2NLQ7Z3S9 236 aa8.24□□□□□ -1.09
CXCL12-206ENST00000395795 KRTAP9-8Q9BYQ0 159 aa8.23□□□□□ -1.09
CXCL12-206ENST00000395795 TRBV7-4A0A0J9YYF1 115 aa8.22□□□□□ -1.09
CXCL12-206ENST00000395795 PRO0461Q9UI25 63 aa8.22□□□□□ -1.09
CXCL12-206ENST00000395795 F8W1H4 67 aa8.21□□□□□ -1.1
CXCL12-206ENST00000395795 LINC00472Q9H8W2 130 aa8.21□□□□□ -1.1
CXCL12-206ENST00000395795 PDE6GP18545 87 aa8.2□□□□□ -1.1
CXCL12-206ENST00000395795 SMCPP49901 116 aaPredicted RBP8.2□□□□□ -1.1
CXCL12-206ENST00000395795 CCKP06307 115 aa8.18□□□□□ -1.1
CXCL12-206ENST00000395795 SIGMAR1Q99720 223 aa8.18□□□□□ -1.1
CXCL12-206ENST00000395795 LOC110117498A0A087WWA1 95 aa8.17□□□□□ -1.1
CXCL12-206ENST00000395795 A0A1B0GV90 55 aa8.17□□□□□ -1.1
CXCL12-206ENST00000395795 IGKV4-1P06312 121 aa8.17□□□□□ -1.1
CXCL12-206ENST00000395795 C21orf62-AS1Q17RA5 79 aa8.17□□□□□ -1.1
CXCL12-206ENST00000395795 LINC00313P59037 77 aa8.16□□□□□ -1.1
CXCL12-206ENST00000395795 MPLKIPQ8TAP9 179 aa8.16□□□□□ -1.1
CXCL12-206ENST00000395795 C14orf132Q9NPU4 83 aa8.16□□□□□ -1.1
CXCL12-206ENST00000395795 DEFB116Q30KQ4 102 aa8.15□□□□□ -1.1
CXCL12-206ENST00000395795 Q6ZQT0 140 aa8.15□□□□□ -1.1
CXCL12-206ENST00000395795 VPS25Q9BRG1 176 aa8.15□□□□□ -1.1
CXCL12-206ENST00000395795 HRES1P13985 223 aa8.13□□□□□ -1.11
CXCL12-206ENST00000395795 A0A1B0GW54 56 aa8.12□□□□□ -1.11
CXCL12-206ENST00000395795 ETDBQ3ZM63 59 aa8.09□□□□□ -1.11
CXCL12-206ENST00000395795 MT2AP02795 61 aa8.07□□□□□ -1.12
CXCL12-206ENST00000395795 IGHV6-1A0A0B4J1U7 121 aa8.06□□□□□ -1.12
CXCL12-206ENST00000395795 A0A1B0GVX0 72 aa8.04□□□□□ -1.12
CXCL12-206ENST00000395795 USH2AO75445 5202 aa8.02□□□□□ -1.13
CXCL12-206ENST00000395795 MT1FP04733 61 aa8.02□□□□□ -1.13
CXCL12-206ENST00000395795 C8orf87E5RJ46 101 aa8□□□□□ -1.13
CXCL12-206ENST00000395795 NREPQ16612 68 aa7.99□□□□□ -1.13
CXCL12-206ENST00000395795 SSPOA2VEC9 5147 aa7.99□□□□□ -1.13
CXCL12-206ENST00000395795 LCE2BO14633 110 aa7.97□□□□□ -1.13
CXCL12-206ENST00000395795 KRTAP9-3Q9BYQ3 159 aa7.97□□□□□ -1.13
CXCL12-206ENST00000395795 J3KT08 172 aa7.96□□□□□ -1.14
CXCL12-206ENST00000395795 FAM236DA0A1B0GTK5 79 aa7.95□□□□□ -1.14
CXCL12-206ENST00000395795 FAM236CP0DP71 79 aa7.95□□□□□ -1.14
CXCL12-206ENST00000395795 Q8N9P0 234 aaPredicted RBP7.95□□□□□ -1.14
CXCL12-206ENST00000395795 ZCCHC13Q8WW36 166 aaKnown RBP7.95□□□□□ -1.14
CXCL12-206ENST00000395795 RBM12B-AS1Q9P1G2 102 aa7.94□□□□□ -1.14
CXCL12-206ENST00000395795 LINC00846Q9NV44 126 aa7.92□□□□□ -1.14
CXCL12-206ENST00000395795 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.91□□□□□ -1.14
CXCL12-206ENST00000395795 ACYP1P07311 99 aa7.91□□□□□ -1.14
CXCL12-206ENST00000395795 SPINK7P58062 85 aa7.91□□□□□ -1.14
CXCL12-206ENST00000395795 UBL5Q9BZL1 73 aa7.91□□□□□ -1.14
CXCL12-206ENST00000395795 Q6ZVQ6 151 aa7.9□□□□□ -1.14
CXCL12-206ENST00000395795 IGKV3D-7A0A0C4DH55 119 aa7.89□□□□□ -1.15
CXCL12-206ENST00000395795 NDUFB1O75438 58 aa7.89□□□□□ -1.15
CXCL12-206ENST00000395795 C8orf17Q9NRJ1 99 aa7.89□□□□□ -1.15
CXCL12-206ENST00000395795 FAM240AA0A1B0GVK7 77 aa7.88□□□□□ -1.15
CXCL12-206ENST00000395795 A8MWP4 228 aa7.88□□□□□ -1.15
CXCL12-206ENST00000395795 BPY2O14599 106 aa7.87□□□□□ -1.15
CXCL12-206ENST00000395795 J3QR89 54 aa7.85□□□□□ -1.15
CXCL12-206ENST00000395795 KRTAP10-10P60014 251 aa7.85□□□□□ -1.15
CXCL12-206ENST00000395795 KRTAP19-1Q8IUB9 90 aa7.83□□□□□ -1.16
CXCL12-206ENST00000395795 FCGBPQ9Y6R7 5405 aaPredicted RBP7.83□□□□□ -1.16
CXCL12-206ENST00000395795 KRTAP9-7A8MTY7 169 aa7.81□□□□□ -1.16
CXCL12-206ENST00000395795 PRR15Q8IV56 129 aa7.81□□□□□ -1.16
CXCL12-206ENST00000395795 MMP24-AS1A0A0U1RRL7 71 aa7.79□□□□□ -1.16
CXCL12-206ENST00000395795 WFDC13Q8IUB5 93 aa7.78□□□□□ -1.16
CXCL12-206ENST00000395795 K7EQZ3 153 aa7.77□□□□□ -1.17
CXCL12-206ENST00000395795 CXCL6P80162 114 aa7.77□□□□□ -1.17
CXCL12-206ENST00000395795 K7ERU9 68 aa7.73□□□□□ -1.17
CXCL12-206ENST00000395795 ATP5EP2Q5VTU8 51 aa7.73□□□□□ -1.17
CXCL12-206ENST00000395795 LINC00643Q86TS7 51 aa7.73□□□□□ -1.17
CXCL12-206ENST00000395795 TMEM254Q8TBM7 123 aa7.73□□□□□ -1.17
CXCL12-206ENST00000395795 Q8N9L7 120 aa7.72□□□□□ -1.17
CXCL12-206ENST00000395795 MRPL34Q9BQ48 92 aaKnown RBP7.72□□□□□ -1.17
CXCL12-206ENST00000395795 hDV103S1A0JD37 113 aa7.69□□□□□ -1.18
CXCL12-206ENST00000395795 KRTAP19-6Q3LI70 58 aa7.68□□□□□ -1.18
CXCL12-206ENST00000395795 Q5W150 140 aa7.67□□□□□ -1.18
CXCL12-206ENST00000395795 CASC2Q6XLA1 102 aa7.66□□□□□ -1.18
CXCL12-206ENST00000395795 HCG22E2RYF7 251 aa7.65□□□□□ -1.18
CXCL12-206ENST00000395795 HIST1H4AP62805 103 aaKnown RBP7.62□□□□□ -1.19
CXCL12-206ENST00000395795 H1FX-AS1Q4G0G2 97 aa7.62□□□□□ -1.19
CXCL12-206ENST00000395795 NDUFS5O43920 106 aa7.6□□□□□ -1.19
CXCL12-206ENST00000395795 MACF1Q9UPN3 7388 aaKnown RBP7.6□□□□□ -1.19
CXCL12-206ENST00000395795 IGKV2D-30A0A075B6S6 120 aa7.56□□□□□ -1.2
CXCL12-206ENST00000395795 IGKV2-30P06310 120 aa7.56□□□□□ -1.2
CXCL12-206ENST00000395795 C7orf65Q6ZTY9 151 aa7.53□□□□□ -1.2
CXCL12-206ENST00000395795 SYNE2Q8WXH0 6885 aaKnown RBP7.52□□□□□ -1.21
CXCL12-206ENST00000395795 A0A087WVE0 104 aa7.52□□□□□ -1.21
CXCL12-206ENST00000395795 IMUPQ9GZP8 106 aa7.52□□□□□ -1.21
CXCL12-206ENST00000395795 TP53AIP1Q9HCN2 124 aa7.51□□□□□ -1.21
CXCL12-206ENST00000395795 KRTAP3-1Q9BYR8 98 aa7.5□□□□□ -1.21
CXCL12-206ENST00000395795 MT-ATP8P03928 68 aa7.49□□□□□ -1.21
CXCL12-206ENST00000395795 C4orf26Q17RF5 130 aa7.48□□□□□ -1.21
CXCL12-206ENST00000395795 UQCRQO14949 82 aa7.41□□□□□ -1.22
CXCL12-206ENST00000395795 SCGB1A1P11684 91 aa7.4□□□□□ -1.22
CXCL12-206ENST00000395795 TRAV22A0A0B4J277 110 aa7.36□□□□□ -1.23
CXCL12-206ENST00000395795 C5orf47Q569G3 176 aa7.36□□□□□ -1.23
CXCL12-206ENST00000395795 MT1BP07438 61 aa7.35□□□□□ -1.23
CXCL12-206ENST00000395795 OCR1Q9BZK8 76 aa7.35□□□□□ -1.23
CXCL12-206ENST00000395795 KRTAP6-3Q3LI67 103 aa7.34□□□□□ -1.23
CXCL12-206ENST00000395795 FAM236AA0A1B0GUQ0 79 aa7.33□□□□□ -1.24
CXCL12-206ENST00000395795 FAM236BA0A1B0GV22 79 aa7.33□□□□□ -1.24
CXCL12-206ENST00000395795 ATOX1O00244 68 aa7.32□□□□□ -1.24
CXCL12-206ENST00000395795 H0Y9P7 68 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms