RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 UBE2V1Q13404 147 aa7.18□□□□□ -1.26
CXCL12-205ENST00000395794 KRTAP9-3Q9BYQ3 159 aa7.18□□□□□ -1.26
CXCL12-205ENST00000395794 A8MUU9 505 aa7.17□□□□□ -1.26
CXCL12-205ENST00000395794 DSCR10P59022 87 aa7.17□□□□□ -1.26
CXCL12-205ENST00000395794 LINC00313P59037 77 aa7.16□□□□□ -1.26
CXCL12-205ENST00000395794 DSCR8Q96T75 97 aa7.14□□□□□ -1.27
CXCL12-205ENST00000395794 VPS25Q9BRG1 176 aa7.14□□□□□ -1.27
CXCL12-205ENST00000395794 TRBV20-1A0A075B6N2 111 aa7.13□□□□□ -1.27
CXCL12-205ENST00000395794 KRTAP10-6P60371 365 aaPredicted RBP7.13□□□□□ -1.27
CXCL12-205ENST00000395794 RBM3P98179 157 aaKnown RBP7.13□□□□□ -1.27
CXCL12-205ENST00000395794 DEFB116Q30KQ4 102 aa7.11□□□□□ -1.27
CXCL12-205ENST00000395794 FSIP2Q5CZC0 6907 aa7.11□□□□□ -1.27
CXCL12-205ENST00000395794 M0R143 59 aa7.1□□□□□ -1.27
CXCL12-205ENST00000395794 BAALC-AS2P0C853 105 aa7.1□□□□□ -1.27
CXCL12-205ENST00000395794 KRTAP5-3Q6L8H2 238 aa7.1□□□□□ -1.27
CXCL12-205ENST00000395794 LINC00472Q9H8W2 130 aa7.1□□□□□ -1.27
CXCL12-205ENST00000395794 IGHV6-1A0A0B4J1U7 121 aa7.09□□□□□ -1.27
CXCL12-205ENST00000395794 C9JAW5 83 aa7.08□□□□□ -1.28
CXCL12-205ENST00000395794 ATXN8Q156A1 80 aa7.06□□□□□ -1.28
CXCL12-205ENST00000395794 KRTAP16-1A8MUX0 517 aa7.05□□□□□ -1.28
CXCL12-205ENST00000395794 FLGP20930 4061 aaPredicted RBP7.05□□□□□ -1.28
CXCL12-205ENST00000395794 C8orf87E5RJ46 101 aa7.04□□□□□ -1.28
CXCL12-205ENST00000395794 J3KT08 172 aa7.04□□□□□ -1.28
CXCL12-205ENST00000395794 A0A1B0GVX0 72 aa7.03□□□□□ -1.28
CXCL12-205ENST00000395794 JMJD7-PLA2G4BH0Y9G9 81 aa7.03□□□□□ -1.28
CXCL12-205ENST00000395794 NOTCH2NLQ7Z3S9 236 aa7.03□□□□□ -1.28
CXCL12-205ENST00000395794 CRCT1Q9UGL9 99 aa7.03□□□□□ -1.28
CXCL12-205ENST00000395794 FAM236DA0A1B0GTK5 79 aa7.01□□□□□ -1.29
CXCL12-205ENST00000395794 SMIM6P0DI80 62 aa7.01□□□□□ -1.29
CXCL12-205ENST00000395794 FAM236CP0DP71 79 aa7.01□□□□□ -1.29
CXCL12-205ENST00000395794 NAA38Q9BRA0 125 aaKnown RBP7.01□□□□□ -1.29
CXCL12-205ENST00000395794 NDUFB1O75438 58 aa7□□□□□ -1.29
CXCL12-205ENST00000395794 LYRM7Q5U5X0 104 aa7□□□□□ -1.29
CXCL12-205ENST00000395794 Q6ZQT0 140 aa7□□□□□ -1.29
CXCL12-205ENST00000395794 PDE6GP18545 87 aa6.99□□□□□ -1.29
CXCL12-205ENST00000395794 RBM12B-AS1Q9P1G2 102 aa6.99□□□□□ -1.29
CXCL12-205ENST00000395794 A0A1B0GW54 56 aa6.98□□□□□ -1.29
CXCL12-205ENST00000395794 LOC110117498A0A087WWA1 95 aa6.97□□□□□ -1.29
CXCL12-205ENST00000395794 TSTD3H0UI37 97 aa6.96□□□□□ -1.3
CXCL12-205ENST00000395794 BATFQ16520 125 aa6.95□□□□□ -1.3
CXCL12-205ENST00000395794 C14orf132Q9NPU4 83 aa6.93□□□□□ -1.3
CXCL12-205ENST00000395794 A8MWP4 228 aa6.92□□□□□ -1.3
CXCL12-205ENST00000395794 MTURNQ8N3F0 131 aa6.92□□□□□ -1.3
CXCL12-205ENST00000395794 ZCCHC13Q8WW36 166 aaKnown RBP6.92□□□□□ -1.3
CXCL12-205ENST00000395794 HRES1P13985 223 aa6.91□□□□□ -1.3
CXCL12-205ENST00000395794 NREPQ16612 68 aa6.9□□□□□ -1.3
CXCL12-205ENST00000395794 C8orf17Q9NRJ1 99 aa6.89□□□□□ -1.31
CXCL12-205ENST00000395794 Q8N9P0 234 aaPredicted RBP6.88□□□□□ -1.31
CXCL12-205ENST00000395794 MPLKIPQ8TAP9 179 aa6.88□□□□□ -1.31
CXCL12-205ENST00000395794 IGKV3D-7A0A0C4DH55 119 aa6.87□□□□□ -1.31
CXCL12-205ENST00000395794 SPINK7P58062 85 aa6.87□□□□□ -1.31
CXCL12-205ENST00000395794 C9orf118A6NHY6 69 aa6.85□□□□□ -1.31
CXCL12-205ENST00000395794 Q6ZVQ6 151 aa6.85□□□□□ -1.31
CXCL12-205ENST00000395794 KRTAP9-8Q9BYQ0 159 aa6.85□□□□□ -1.31
CXCL12-205ENST00000395794 H3BT86 120 aa6.84□□□□□ -1.31
CXCL12-205ENST00000395794 PRR15Q8IV56 129 aa6.84□□□□□ -1.31
CXCL12-205ENST00000395794 A0A1W2PPM0 123 aa6.82□□□□□ -1.32
CXCL12-205ENST00000395794 TAX1BP3O14907 124 aa6.8□□□□□ -1.32
CXCL12-205ENST00000395794 TMEM254Q8TBM7 123 aa6.79□□□□□ -1.32
CXCL12-205ENST00000395794 MRPL34Q9BQ48 92 aaKnown RBP6.79□□□□□ -1.32
CXCL12-205ENST00000395794 LOC105371267A0A1B0GV96 52 aa6.78□□□□□ -1.32
CXCL12-205ENST00000395794 WFDC13Q8IUB5 93 aa6.78□□□□□ -1.32
CXCL12-205ENST00000395794 BPY2O14599 106 aa6.77□□□□□ -1.33
CXCL12-205ENST00000395794 NDUFS5O43920 106 aa6.77□□□□□ -1.33
CXCL12-205ENST00000395794 MMP24-AS1A0A0U1RRL7 71 aa6.76□□□□□ -1.33
CXCL12-205ENST00000395794 hDV103S1A0JD37 113 aa6.76□□□□□ -1.33
CXCL12-205ENST00000395794 H3BS24 57 aa6.76□□□□□ -1.33
CXCL12-205ENST00000395794 MT2AP02795 61 aa6.76□□□□□ -1.33
CXCL12-205ENST00000395794 K7EQZ3 153 aa6.75□□□□□ -1.33
CXCL12-205ENST00000395794 KRTAP10-10P60014 251 aa6.74□□□□□ -1.33
CXCL12-205ENST00000395794 SPCS1Q9Y6A9 102 aa6.74□□□□□ -1.33
CXCL12-205ENST00000395794 USH2AO75445 5202 aa6.72□□□□□ -1.33
CXCL12-205ENST00000395794 MT1FP04733 61 aa6.7□□□□□ -1.34
CXCL12-205ENST00000395794 COL5A1-AS1Q5SY13 56 aa6.67□□□□□ -1.34
CXCL12-205ENST00000395794 CASC2Q6XLA1 102 aa6.67□□□□□ -1.34
CXCL12-205ENST00000395794 IGKV2D-30A0A075B6S6 120 aa6.65□□□□□ -1.34
CXCL12-205ENST00000395794 IGKV2-30P06310 120 aa6.65□□□□□ -1.34
CXCL12-205ENST00000395794 Q8N9L7 120 aa6.65□□□□□ -1.34
CXCL12-205ENST00000395794 H1FX-AS1Q4G0G2 97 aa6.64□□□□□ -1.35
CXCL12-205ENST00000395794 C7orf65Q6ZTY9 151 aa6.64□□□□□ -1.35
CXCL12-205ENST00000395794 UBL5Q9BZL1 73 aa6.64□□□□□ -1.35
CXCL12-205ENST00000395794 SSPOA2VEC9 5147 aa6.64□□□□□ -1.35
CXCL12-205ENST00000395794 HCG22E2RYF7 251 aa6.62□□□□□ -1.35
CXCL12-205ENST00000395794 CXCL6P80162 114 aa6.61□□□□□ -1.35
CXCL12-205ENST00000395794 Q5W150 140 aa6.61□□□□□ -1.35
CXCL12-205ENST00000395794 K7EP34 96 aa6.6□□□□□ -1.35
CXCL12-205ENST00000395794 LINC00846Q9NV44 126 aa6.59□□□□□ -1.35
CXCL12-205ENST00000395794 PRO0461Q9UI25 63 aa6.58□□□□□ -1.36
CXCL12-205ENST00000395794 GTF2H5Q6ZYL4 71 aa6.56□□□□□ -1.36
CXCL12-205ENST00000395794 C4orf26Q17RF5 130 aa6.53□□□□□ -1.36
CXCL12-205ENST00000395794 FCGBPQ9Y6R7 5405 aaPredicted RBP6.51□□□□□ -1.37
CXCL12-205ENST00000395794 F8W1H4 67 aa6.51□□□□□ -1.37
CXCL12-205ENST00000395794 TP53AIP1Q9HCN2 124 aa6.48□□□□□ -1.37
CXCL12-205ENST00000395794 PCP4L1A6NKN8 68 aa6.47□□□□□ -1.37
CXCL12-205ENST00000395794 ETDBQ3ZM63 59 aa6.46□□□□□ -1.38
CXCL12-205ENST00000395794 C1orf64Q8NEQ6 169 aa6.42□□□□□ -1.38
CXCL12-205ENST00000395794 C5orf47Q569G3 176 aa6.41□□□□□ -1.38
CXCL12-205ENST00000395794 S4R3F8 94 aa6.41□□□□□ -1.38
CXCL12-205ENST00000395794 KRTAP19-6Q3LI70 58 aa6.4□□□□□ -1.38
CXCL12-205ENST00000395794 FAM236AA0A1B0GUQ0 79 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms