RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 A0A087X002 238 aa5.46□□□□□ -1.54
CDRT1-203ENST00000395667 NOTCH2NLQ7Z3S9 236 aa5.46□□□□□ -1.54
CDRT1-203ENST00000395667 PSPHP1O15172 72 aa5.45□□□□□ -1.54
CDRT1-203ENST00000395667 IGLV7-46A0A075B6I9 117 aa5.43□□□□□ -1.54
CDRT1-203ENST00000395667 SSBP3-AS1Q7Z2R9 100 aa5.43□□□□□ -1.54
CDRT1-203ENST00000395667 DNAH6Q9C0G6 4158 aa5.43□□□□□ -1.54
CDRT1-203ENST00000395667 CD164Q04900 197 aa5.42□□□□□ -1.54
CDRT1-203ENST00000395667 V9GYY9 64 aa5.42□□□□□ -1.54
CDRT1-203ENST00000395667 COA5Q86WW8 74 aa5.41□□□□□ -1.54
CDRT1-203ENST00000395667 DNAH11Q96DT5 4516 aa5.4□□□□□ -1.54
CDRT1-203ENST00000395667 DNAH5Q8TE73 4624 aa5.4□□□□□ -1.55
CDRT1-203ENST00000395667 A8MUN3 132 aa5.4□□□□□ -1.55
CDRT1-203ENST00000395667 KRTAP10-1P60331 282 aa5.4□□□□□ -1.55
CDRT1-203ENST00000395667 ALMS1Q8TCU4 4167 aa5.39□□□□□ -1.55
CDRT1-203ENST00000395667 C8orf87E5RJ46 101 aa5.37□□□□□ -1.55
CDRT1-203ENST00000395667 Q8N9P0 234 aaPredicted RBP5.37□□□□□ -1.55
CDRT1-203ENST00000395667 LOC101927531A0A1B0GV80 90 aa5.37□□□□□ -1.55
CDRT1-203ENST00000395667 LIMD2Q9BT23 127 aa5.37□□□□□ -1.55
CDRT1-203ENST00000395667 KRTAP13-2Q52LG2 175 aa5.37□□□□□ -1.55
CDRT1-203ENST00000395667 C1orf195Q5TG92 126 aa5.37□□□□□ -1.55
CDRT1-203ENST00000395667 Q5W150 140 aa5.37□□□□□ -1.55
CDRT1-203ENST00000395667 Q6ZSA8 131 aa5.37□□□□□ -1.55
CDRT1-203ENST00000395667 LINC00313P59037 77 aa5.36□□□□□ -1.55
CDRT1-203ENST00000395667 PRR15LQ9BU68 103 aa5.35□□□□□ -1.55
CDRT1-203ENST00000395667 C4orf48Q5BLP8 95 aa5.35□□□□□ -1.55
CDRT1-203ENST00000395667 Q5VV11 94 aa5.34□□□□□ -1.55
CDRT1-203ENST00000395667 SEC61GP60059 68 aa5.34□□□□□ -1.56
CDRT1-203ENST00000395667 CHKB-CPT1BH3BT56 60 aa5.33□□□□□ -1.56
CDRT1-203ENST00000395667 RETNLBQ9BQ08 111 aa5.32□□□□□ -1.56
CDRT1-203ENST00000395667 HRES1P13985 223 aa5.32□□□□□ -1.56
CDRT1-203ENST00000395667 KRTAP13-3Q3SY46 172 aa5.32□□□□□ -1.56
CDRT1-203ENST00000395667 LRP1BQ9NZR2 4599 aa5.32□□□□□ -1.56
CDRT1-203ENST00000395667 SPAG11AQ6PDA7 123 aa5.31□□□□□ -1.56
CDRT1-203ENST00000395667 HYDINQ4G0P3 5121 aa5.31□□□□□ -1.56
CDRT1-203ENST00000395667 FAM229AH3BQW9 127 aa5.3□□□□□ -1.56
CDRT1-203ENST00000395667 KRTAP1-4P0C5Y4 121 aa5.3□□□□□ -1.56
CDRT1-203ENST00000395667 PLA2G1BP04054 148 aaKnown RBP5.3□□□□□ -1.56
CDRT1-203ENST00000395667 PKD1P98161 4303 aa5.3□□□□□ -1.56
CDRT1-203ENST00000395667 TYMSOSQ8TAI1 123 aa5.28□□□□□ -1.56
CDRT1-203ENST00000395667 FAT2Q9NYQ8 4349 aa5.28□□□□□ -1.56
CDRT1-203ENST00000395667 VPS13BQ7Z7G8 4022 aa5.28□□□□□ -1.56
CDRT1-203ENST00000395667 A6NED7 52 aa5.26□□□□□ -1.57
CDRT1-203ENST00000395667 Q75L30 129 aa5.26□□□□□ -1.57
CDRT1-203ENST00000395667 ACYP2P14621 99 aa5.26□□□□□ -1.57
CDRT1-203ENST00000395667 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
CDRT1-203ENST00000395667 A8MU10 97 aa5.25□□□□□ -1.57
CDRT1-203ENST00000395667 PRR26Q8N8Z3 221 aa5.25□□□□□ -1.57
CDRT1-203ENST00000395667 KRTAP16-1A8MUX0 517 aa5.24□□□□□ -1.57
CDRT1-203ENST00000395667 IGKV2-30P06310 120 aa5.24□□□□□ -1.57
CDRT1-203ENST00000395667 SPINK1P00995 79 aa5.23□□□□□ -1.57
CDRT1-203ENST00000395667 IGKV2D-30A0A075B6S6 120 aa5.22□□□□□ -1.57
CDRT1-203ENST00000395667 DMAC1Q96GE9 116 aa5.22□□□□□ -1.57
CDRT1-203ENST00000395667 SPTSSBQ8NFR3 76 aa5.21□□□□□ -1.58
CDRT1-203ENST00000395667 SMR3BP02814 79 aaPredicted RBP5.2□□□□□ -1.58
CDRT1-203ENST00000395667 LINC00304Q8N9R0 145 aa5.2□□□□□ -1.58
CDRT1-203ENST00000395667 LCA10Q71F78 164 aa5.2□□□□□ -1.58
CDRT1-203ENST00000395667 PKHD1P08F94 4074 aa5.19□□□□□ -1.58
CDRT1-203ENST00000395667 PMAIP1Q13794 54 aa5.19□□□□□ -1.58
CDRT1-203ENST00000395667 KRTAP21-3Q3LHN1 58 aa5.18□□□□□ -1.58
CDRT1-203ENST00000395667 CDC42SE1Q9NRR8 79 aa5.17□□□□□ -1.58
CDRT1-203ENST00000395667 SPINK7P58062 85 aa5.16□□□□□ -1.58
CDRT1-203ENST00000395667 ATP11AUNQ6ZP68 121 aa5.15□□□□□ -1.58
CDRT1-203ENST00000395667 C7orf65Q6ZTY9 151 aa5.15□□□□□ -1.58
CDRT1-203ENST00000395667 SACSQ9NZJ4 4579 aa5.14□□□□□ -1.59
CDRT1-203ENST00000395667 RPS29P62273 56 aaKnown RBP5.14□□□□□ -1.59
CDRT1-203ENST00000395667 DYNC1H1Q14204 4646 aaKnown RBP5.12□□□□□ -1.59
CDRT1-203ENST00000395667 A0A1B0GU69 56 aa5.12□□□□□ -1.59
CDRT1-203ENST00000395667 C9orf92A6NGG3 77 aa5.1□□□□□ -1.59
CDRT1-203ENST00000395667 A0A1B0GVY2 172 aa5.09□□□□□ -1.6
CDRT1-203ENST00000395667 Q8N1X5 172 aa5.08□□□□□ -1.6
CDRT1-203ENST00000395667 FAT1Q14517 4588 aa5.08□□□□□ -1.6
CDRT1-203ENST00000395667 A6NN06 94 aa5.05□□□□□ -1.6
CDRT1-203ENST00000395667 KRTAP10-4P60372 401 aaPredicted RBP5.05□□□□□ -1.6
CDRT1-203ENST00000395667 KTN1-AS1Q86SY8 53 aa5.04□□□□□ -1.6
CDRT1-203ENST00000395667 APOBP04114 4563 aaKnown RBP5.03□□□□□ -1.6
CDRT1-203ENST00000395667 A8MUU9 505 aa5.03□□□□□ -1.6
CDRT1-203ENST00000395667 C20orf166-AS1Q96NR2 134 aa5.03□□□□□ -1.6
CDRT1-203ENST00000395667 UQCR11O14957 56 aa5.01□□□□□ -1.61
CDRT1-203ENST00000395667 PKHD1L1Q86WI1 4243 aa5□□□□□ -1.61
CDRT1-203ENST00000395667 MIR22HGQ0VDD5 57 aa4.99□□□□□ -1.61
CDRT1-203ENST00000395667 FLG2Q5D862 2391 aaPredicted RBP4.99□□□□□ -1.61
CDRT1-203ENST00000395667 SPATA8Q6RVD6 105 aa4.98□□□□□ -1.61
CDRT1-203ENST00000395667 RYR2Q92736 4967 aa4.97□□□□□ -1.61
CDRT1-203ENST00000395667 RBM12B-AS1Q9P1G2 102 aa4.96□□□□□ -1.62
CDRT1-203ENST00000395667 KMT2CQ8NEZ4 4911 aaKnown RBP4.94□□□□□ -1.62
CDRT1-203ENST00000395667 DMBT1Q9UGM3 2413 aaPredicted RBP4.94□□□□□ -1.62
CDRT1-203ENST00000395667 KRTAP3-1Q9BYR8 98 aa4.93□□□□□ -1.62
CDRT1-203ENST00000395667 Q5VSD8 79 aa4.91□□□□□ -1.62
CDRT1-203ENST00000395667 LRP1Q07954 4544 aaKnown RBP4.89□□□□□ -1.63
CDRT1-203ENST00000395667 KRTAP10-8P60410 259 aa4.88□□□□□ -1.63
CDRT1-203ENST00000395667 COX6B2Q6YFQ2 88 aa4.88□□□□□ -1.63
CDRT1-203ENST00000395667 TNXBP22105 4242 aa4.85□□□□□ -1.63
CDRT1-203ENST00000395667 FAT3Q8TDW7 4589 aa4.85□□□□□ -1.63
CDRT1-203ENST00000395667 PRAC1Q96KF2 57 aa4.85□□□□□ -1.63
CDRT1-203ENST00000395667 A0A1B0GU33 70 aa4.84□□□□□ -1.63
CDRT1-203ENST00000395667 ADM2Q7Z4H4 148 aa4.83□□□□□ -1.64
CDRT1-203ENST00000395667 HSPG2P98160 4391 aa4.83□□□□□ -1.64
CDRT1-203ENST00000395667 H0YAA0 97 aa4.83□□□□□ -1.64
CDRT1-203ENST00000395667 RPL37P61927 97 aaKnown RBP4.82□□□□□ -1.64
CDRT1-203ENST00000395667 H1FX-AS1Q4G0G2 97 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms