RNA–Protein interactions for RNA: ENST00000395503.8

ATP2A1-202, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2A1, Length 3,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-202ENST00000395503 A6NED7 52 aa6.9□□□□□ -1.3
ATP2A1-202ENST00000395503 ZNF861PO60384 105 aa6.9□□□□□ -1.3
ATP2A1-202ENST00000395503 PRKDCP78527 4128 aaKnown RBP6.9□□□□□ -1.31
ATP2A1-202ENST00000395503 MRPL34Q9BQ48 92 aaKnown RBP6.9□□□□□ -1.31
ATP2A1-202ENST00000395503 IGLV7-46A0A075B6I9 117 aa6.89□□□□□ -1.31
ATP2A1-202ENST00000395503 ZNF706Q9Y5V0 76 aaPredicted RBP6.89□□□□□ -1.31
ATP2A1-202ENST00000395503 LY6G6CO95867 125 aa6.88□□□□□ -1.31
ATP2A1-202ENST00000395503 RBM12B-AS1Q9P1G2 102 aa6.88□□□□□ -1.31
ATP2A1-202ENST00000395503 DNAH2Q9P225 4427 aa6.88□□□□□ -1.31
ATP2A1-202ENST00000395503 TP53AIP1Q9HCN2 124 aa6.87□□□□□ -1.31
ATP2A1-202ENST00000395503 LINC00483Q53H64 154 aa6.87□□□□□ -1.31
ATP2A1-202ENST00000395503 Q5W150 140 aa6.87□□□□□ -1.31
ATP2A1-202ENST00000395503 LIMD2Q9BT23 127 aa6.87□□□□□ -1.31
ATP2A1-202ENST00000395503 DNAH17Q9UFH2 4485 aa6.86□□□□□ -1.31
ATP2A1-202ENST00000395503 HECTD4Q9Y4D8 3996 aa6.85□□□□□ -1.31
ATP2A1-202ENST00000395503 VPS13DQ5THJ4 4388 aa6.85□□□□□ -1.31
ATP2A1-202ENST00000395503 DYNC2H1Q8NCM8 4307 aaKnown RBP6.84□□□□□ -1.31
ATP2A1-202ENST00000395503 PRR26Q8N8Z3 221 aa6.84□□□□□ -1.31
ATP2A1-202ENST00000395503 H3BS24 57 aa6.83□□□□□ -1.32
ATP2A1-202ENST00000395503 HRES1P13985 223 aa6.83□□□□□ -1.32
ATP2A1-202ENST00000395503 C1orf134Q5TEV5 83 aa6.83□□□□□ -1.32
ATP2A1-202ENST00000395503 PLAC8Q9NZF1 115 aa6.83□□□□□ -1.32
ATP2A1-202ENST00000395503 IGLV7-43P04211 117 aa6.82□□□□□ -1.32
ATP2A1-202ENST00000395503 ASB16-AS1Q495Z4 193 aa6.82□□□□□ -1.32
ATP2A1-202ENST00000395503 Q6ZR54 194 aa6.82□□□□□ -1.32
ATP2A1-202ENST00000395503 LCA10Q71F78 164 aa6.81□□□□□ -1.32
ATP2A1-202ENST00000395503 DNAH6Q9C0G6 4158 aa6.8□□□□□ -1.32
ATP2A1-202ENST00000395503 KRTAP10-2P60368 255 aa6.79□□□□□ -1.32
ATP2A1-202ENST00000395503 DNAH11Q96DT5 4516 aa6.78□□□□□ -1.32
ATP2A1-202ENST00000395503 SPINK7P58062 85 aa6.77□□□□□ -1.33
ATP2A1-202ENST00000395503 LOC101927531A0A1B0GV80 90 aa6.76□□□□□ -1.33
ATP2A1-202ENST00000395503 DNHD1Q96M86 4753 aa6.75□□□□□ -1.33
ATP2A1-202ENST00000395503 Q75L30 129 aa6.75□□□□□ -1.33
ATP2A1-202ENST00000395503 KTN1-AS1Q86SY8 53 aa6.74□□□□□ -1.33
ATP2A1-202ENST00000395503 LINC00313P59037 77 aa6.73□□□□□ -1.33
ATP2A1-202ENST00000395503 LINC01558Q9Y6Z2 57 aa6.71□□□□□ -1.33
ATP2A1-202ENST00000395503 IGKV2D-30A0A075B6S6 120 aa6.7□□□□□ -1.34
ATP2A1-202ENST00000395503 IGKV2-30P06310 120 aa6.7□□□□□ -1.34
ATP2A1-202ENST00000395503 LRP1BQ9NZR2 4599 aa6.7□□□□□ -1.34
ATP2A1-202ENST00000395503 KRTAP13-2Q52LG2 175 aa6.69□□□□□ -1.34
ATP2A1-202ENST00000395503 ALMS1Q8TCU4 4167 aa6.68□□□□□ -1.34
ATP2A1-202ENST00000395503 SSBP3-AS1Q7Z2R9 100 aa6.68□□□□□ -1.34
ATP2A1-202ENST00000395503 KRTAP10-1P60331 282 aa6.67□□□□□ -1.34
ATP2A1-202ENST00000395503 PRAC1Q96KF2 57 aa6.67□□□□□ -1.34
ATP2A1-202ENST00000395503 ACYP2P14621 99 aa6.67□□□□□ -1.34
ATP2A1-202ENST00000395503 CDC42SE1Q9NRR8 79 aa6.67□□□□□ -1.34
ATP2A1-202ENST00000395503 KRTAP13-3Q3SY46 172 aa6.66□□□□□ -1.34
ATP2A1-202ENST00000395503 DNAH5Q8TE73 4624 aa6.66□□□□□ -1.34
ATP2A1-202ENST00000395503 ATP11AUNQ6ZP68 121 aa6.66□□□□□ -1.34
ATP2A1-202ENST00000395503 C8orf87E5RJ46 101 aa6.64□□□□□ -1.35
ATP2A1-202ENST00000395503 HYDINQ4G0P3 5121 aa6.63□□□□□ -1.35
ATP2A1-202ENST00000395503 SPINK1P00995 79 aa6.63□□□□□ -1.35
ATP2A1-202ENST00000395503 FAM229AH3BQW9 127 aa6.62□□□□□ -1.35
ATP2A1-202ENST00000395503 PLA2G1BP04054 148 aaKnown RBP6.6□□□□□ -1.35
ATP2A1-202ENST00000395503 A6NN06 94 aa6.59□□□□□ -1.35
ATP2A1-202ENST00000395503 A0A1B0GU69 56 aa6.59□□□□□ -1.36
ATP2A1-202ENST00000395503 C7orf65Q6ZTY9 151 aa6.57□□□□□ -1.36
ATP2A1-202ENST00000395503 DMAC1Q96GE9 116 aa6.57□□□□□ -1.36
ATP2A1-202ENST00000395503 Q8N1X5 172 aa6.56□□□□□ -1.36
ATP2A1-202ENST00000395503 TYMSOSQ8TAI1 123 aa6.56□□□□□ -1.36
ATP2A1-202ENST00000395503 SMR3BP02814 79 aaPredicted RBP6.56□□□□□ -1.36
ATP2A1-202ENST00000395503 VPS13BQ7Z7G8 4022 aa6.55□□□□□ -1.36
ATP2A1-202ENST00000395503 KRTAP1-4P0C5Y4 121 aa6.54□□□□□ -1.36
ATP2A1-202ENST00000395503 KRTAP16-1A8MUX0 517 aa6.53□□□□□ -1.36
ATP2A1-202ENST00000395503 ADM2Q7Z4H4 148 aa6.53□□□□□ -1.36
ATP2A1-202ENST00000395503 FAT2Q9NYQ8 4349 aa6.52□□□□□ -1.37
ATP2A1-202ENST00000395503 C9orf92A6NGG3 77 aa6.51□□□□□ -1.37
ATP2A1-202ENST00000395503 Q6ZSA8 131 aa6.49□□□□□ -1.37
ATP2A1-202ENST00000395503 PKD1P98161 4303 aa6.48□□□□□ -1.37
ATP2A1-202ENST00000395503 PKHD1P08F94 4074 aa6.47□□□□□ -1.37
ATP2A1-202ENST00000395503 MIR22HGQ0VDD5 57 aa6.45□□□□□ -1.38
ATP2A1-202ENST00000395503 LINC01554Q52M75 96 aa6.44□□□□□ -1.38
ATP2A1-202ENST00000395503 FAT1Q14517 4588 aa6.44□□□□□ -1.38
ATP2A1-202ENST00000395503 LINC00304Q8N9R0 145 aa6.43□□□□□ -1.38
ATP2A1-202ENST00000395503 UQCR11O14957 56 aa6.42□□□□□ -1.38
ATP2A1-202ENST00000395503 FLG2Q5D862 2391 aaPredicted RBP6.38□□□□□ -1.39
ATP2A1-202ENST00000395503 SPATA8Q6RVD6 105 aa6.37□□□□□ -1.39
ATP2A1-202ENST00000395503 DYNC1H1Q14204 4646 aaKnown RBP6.32□□□□□ -1.4
ATP2A1-202ENST00000395503 CSAG1Q6PB30 78 aa6.31□□□□□ -1.4
ATP2A1-202ENST00000395503 DMBT1Q9UGM3 2413 aaPredicted RBP6.3□□□□□ -1.4
ATP2A1-202ENST00000395503 SACSQ9NZJ4 4579 aa6.28□□□□□ -1.4
ATP2A1-202ENST00000395503 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
ATP2A1-202ENST00000395503 KRTAP3-1Q9BYR8 98 aa6.25□□□□□ -1.41
ATP2A1-202ENST00000395503 H0YAA0 97 aa6.21□□□□□ -1.41
ATP2A1-202ENST00000395503 A0A1B0GU33 70 aa6.2□□□□□ -1.42
ATP2A1-202ENST00000395503 A8MUU9 505 aa6.2□□□□□ -1.42
ATP2A1-202ENST00000395503 MYCBP2O75592 4640 aa6.19□□□□□ -1.42
ATP2A1-202ENST00000395503 CRIPTQ9P021 101 aa6.19□□□□□ -1.42
ATP2A1-202ENST00000395503 LRP1Q07954 4544 aaKnown RBP6.19□□□□□ -1.42
ATP2A1-202ENST00000395503 C20orf166-AS1Q96NR2 134 aa6.19□□□□□ -1.42
ATP2A1-202ENST00000395503 APOBP04114 4563 aaKnown RBP6.17□□□□□ -1.42
ATP2A1-202ENST00000395503 RPS29P62273 56 aaKnown RBP6.15□□□□□ -1.43
ATP2A1-202ENST00000395503 H1FX-AS1Q4G0G2 97 aa6.13□□□□□ -1.43
ATP2A1-202ENST00000395503 KRTAP10-4P60372 401 aaPredicted RBP6.12□□□□□ -1.43
ATP2A1-202ENST00000395503 KMT2CQ8NEZ4 4911 aaKnown RBP6.11□□□□□ -1.43
ATP2A1-202ENST00000395503 A0A1B0GVY2 172 aa6.09□□□□□ -1.43
ATP2A1-202ENST00000395503 A0A0D9SG42 100 aa6.09□□□□□ -1.43
ATP2A1-202ENST00000395503 COX6B2Q6YFQ2 88 aa6.09□□□□□ -1.43
ATP2A1-202ENST00000395503 PKHD1L1Q86WI1 4243 aa6.08□□□□□ -1.44
ATP2A1-202ENST00000395503 HSPG2P98160 4391 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms