RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 COX6CP09669 75 aa6.01□□□□□ -1.45
HLA-DQA1-203ENST00000395363 PSMB2P49721 201 aa6.01□□□□□ -1.45
HLA-DQA1-203ENST00000395363 DEFB116Q30KQ4 102 aa6.01□□□□□ -1.45
HLA-DQA1-203ENST00000395363 SIGMAR1Q99720 223 aa6.01□□□□□ -1.45
HLA-DQA1-203ENST00000395363 SS18L2Q9UHA2 77 aa6.01□□□□□ -1.45
HLA-DQA1-203ENST00000395363 UBE2V1Q13404 147 aa6□□□□□ -1.45
HLA-DQA1-203ENST00000395363 ATP11AUNQ6ZP68 121 aa6□□□□□ -1.45
HLA-DQA1-203ENST00000395363 NOTCH2NLQ7Z3S9 236 aa6□□□□□ -1.45
HLA-DQA1-203ENST00000395363 A8MUU9 505 aa5.98□□□□□ -1.45
HLA-DQA1-203ENST00000395363 ORMDL1Q9P0S3 153 aa5.98□□□□□ -1.45
HLA-DQA1-203ENST00000395363 CRCT1Q9UGL9 99 aa5.98□□□□□ -1.45
HLA-DQA1-203ENST00000395363 KRTAP16-1A8MUX0 517 aa5.97□□□□□ -1.45
HLA-DQA1-203ENST00000395363 TAX1BP3O14907 124 aa5.97□□□□□ -1.45
HLA-DQA1-203ENST00000395363 DNAL4O96015 105 aa5.97□□□□□ -1.45
HLA-DQA1-203ENST00000395363 PCP4P48539 62 aa5.97□□□□□ -1.45
HLA-DQA1-203ENST00000395363 GTF2H5Q6ZYL4 71 aa5.97□□□□□ -1.45
HLA-DQA1-203ENST00000395363 ANKRD29Q8N6D5 301 aa5.97□□□□□ -1.45
HLA-DQA1-203ENST00000395363 C20orf166-AS1Q96NR2 134 aa5.97□□□□□ -1.45
HLA-DQA1-203ENST00000395363 IGKV4-1P06312 121 aa5.95□□□□□ -1.46
HLA-DQA1-203ENST00000395363 NAA38Q9BRA0 125 aaKnown RBP5.95□□□□□ -1.46
HLA-DQA1-203ENST00000395363 TRACP01848 142 aa5.94□□□□□ -1.46
HLA-DQA1-203ENST00000395363 CCKP06307 115 aa5.94□□□□□ -1.46
HLA-DQA1-203ENST00000395363 VPS25Q9BRG1 176 aa5.94□□□□□ -1.46
HLA-DQA1-203ENST00000395363 TRBV7-4A0A0J9YYF1 115 aa5.92□□□□□ -1.46
HLA-DQA1-203ENST00000395363 TMEM256-PLSCR3K7ERE1 68 aa5.92□□□□□ -1.46
HLA-DQA1-203ENST00000395363 KRTAP9-3Q9BYQ3 159 aa5.92□□□□□ -1.46
HLA-DQA1-203ENST00000395363 IGHV6-1A0A0B4J1U7 121 aa5.91□□□□□ -1.46
HLA-DQA1-203ENST00000395363 LINC00472Q9H8W2 130 aa5.91□□□□□ -1.46
HLA-DQA1-203ENST00000395363 SCGB1C2P0DMR2 95 aa5.9□□□□□ -1.46
HLA-DQA1-203ENST00000395363 LINC00313P59037 77 aa5.9□□□□□ -1.46
HLA-DQA1-203ENST00000395363 A0A1W2PPM0 123 aa5.89□□□□□ -1.47
HLA-DQA1-203ENST00000395363 K7EP34 96 aa5.89□□□□□ -1.47
HLA-DQA1-203ENST00000395363 LYRM7Q5U5X0 104 aa5.89□□□□□ -1.47
HLA-DQA1-203ENST00000395363 SPCS1Q9Y6A9 102 aa5.87□□□□□ -1.47
HLA-DQA1-203ENST00000395363 TRBV20-1A0A075B6N2 111 aa5.86□□□□□ -1.47
HLA-DQA1-203ENST00000395363 K7ERU9 68 aa5.86□□□□□ -1.47
HLA-DQA1-203ENST00000395363 ATXN8Q156A1 80 aa5.86□□□□□ -1.47
HLA-DQA1-203ENST00000395363 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
HLA-DQA1-203ENST00000395363 BAALC-AS2P0C853 105 aa5.85□□□□□ -1.47
HLA-DQA1-203ENST00000395363 F8W1H4 67 aa5.84□□□□□ -1.47
HLA-DQA1-203ENST00000395363 HRES1P13985 223 aa5.84□□□□□ -1.47
HLA-DQA1-203ENST00000395363 RBM3P98179 157 aaKnown RBP5.84□□□□□ -1.47
HLA-DQA1-203ENST00000395363 KRTAP9-8Q9BYQ0 159 aa5.84□□□□□ -1.47
HLA-DQA1-203ENST00000395363 KRTAP3-1Q9BYR8 98 aa5.84□□□□□ -1.47
HLA-DQA1-203ENST00000395363 USH2AO75445 5202 aa5.84□□□□□ -1.47
HLA-DQA1-203ENST00000395363 A0A1B0GVX0 72 aa5.83□□□□□ -1.48
HLA-DQA1-203ENST00000395363 FAM236DA0A1B0GTK5 79 aa5.82□□□□□ -1.48
HLA-DQA1-203ENST00000395363 J3QR89 54 aa5.82□□□□□ -1.48
HLA-DQA1-203ENST00000395363 FAM236CP0DP71 79 aa5.82□□□□□ -1.48
HLA-DQA1-203ENST00000395363 DSCR8Q96T75 97 aa5.82□□□□□ -1.48
HLA-DQA1-203ENST00000395363 JMJD7-PLA2G4BH0Y9G9 81 aa5.8□□□□□ -1.48
HLA-DQA1-203ENST00000395363 SSPOA2VEC9 5147 aa5.79□□□□□ -1.48
HLA-DQA1-203ENST00000395363 A0A1B0GW54 56 aa5.79□□□□□ -1.48
HLA-DQA1-203ENST00000395363 C9JAW5 83 aa5.79□□□□□ -1.48
HLA-DQA1-203ENST00000395363 MPLKIPQ8TAP9 179 aa5.79□□□□□ -1.48
HLA-DQA1-203ENST00000395363 MT2AP02795 61 aa5.78□□□□□ -1.48
HLA-DQA1-203ENST00000395363 Q6ZQT0 140 aa5.78□□□□□ -1.48
HLA-DQA1-203ENST00000395363 C14orf132Q9NPU4 83 aa5.78□□□□□ -1.48
HLA-DQA1-203ENST00000395363 PDE6GP18545 87 aa5.77□□□□□ -1.49
HLA-DQA1-203ENST00000395363 C8orf87E5RJ46 101 aa5.76□□□□□ -1.49
HLA-DQA1-203ENST00000395363 MTURNQ8N3F0 131 aa5.76□□□□□ -1.49
HLA-DQA1-203ENST00000395363 H3BT86 120 aa5.75□□□□□ -1.49
HLA-DQA1-203ENST00000395363 MT1FP04733 61 aa5.75□□□□□ -1.49
HLA-DQA1-203ENST00000395363 LOC110117498A0A087WWA1 95 aa5.74□□□□□ -1.49
HLA-DQA1-203ENST00000395363 ZCCHC13Q8WW36 166 aaKnown RBP5.74□□□□□ -1.49
HLA-DQA1-203ENST00000395363 IGKV3D-7A0A0C4DH55 119 aa5.73□□□□□ -1.49
HLA-DQA1-203ENST00000395363 C8orf17Q9NRJ1 99 aa5.73□□□□□ -1.49
HLA-DQA1-203ENST00000395363 RBM12B-AS1Q9P1G2 102 aa5.73□□□□□ -1.49
HLA-DQA1-203ENST00000395363 SPINK7P58062 85 aa5.71□□□□□ -1.5
HLA-DQA1-203ENST00000395363 PRO0461Q9UI25 63 aa5.71□□□□□ -1.5
HLA-DQA1-203ENST00000395363 A8MWP4 228 aa5.7□□□□□ -1.5
HLA-DQA1-203ENST00000395363 J3KT08 172 aa5.7□□□□□ -1.5
HLA-DQA1-203ENST00000395363 Q8N9P0 234 aaPredicted RBP5.69□□□□□ -1.5
HLA-DQA1-203ENST00000395363 NDUFB1O75438 58 aa5.68□□□□□ -1.5
HLA-DQA1-203ENST00000395363 MMP24-AS1A0A0U1RRL7 71 aa5.67□□□□□ -1.5
HLA-DQA1-203ENST00000395363 KRTAP10-10P60014 251 aa5.67□□□□□ -1.5
HLA-DQA1-203ENST00000395363 ETDBQ3ZM63 59 aa5.67□□□□□ -1.5
HLA-DQA1-203ENST00000395363 WFDC13Q8IUB5 93 aa5.67□□□□□ -1.5
HLA-DQA1-203ENST00000395363 SCGB1A1P11684 91 aa5.66□□□□□ -1.5
HLA-DQA1-203ENST00000395363 Q6ZVQ6 151 aa5.66□□□□□ -1.5
HLA-DQA1-203ENST00000395363 K7EQZ3 153 aa5.65□□□□□ -1.5
HLA-DQA1-203ENST00000395363 FCGBPQ9Y6R7 5405 aaPredicted RBP5.65□□□□□ -1.51
HLA-DQA1-203ENST00000395363 NREPQ16612 68 aa5.64□□□□□ -1.51
HLA-DQA1-203ENST00000395363 PRR15Q8IV56 129 aa5.64□□□□□ -1.51
HLA-DQA1-203ENST00000395363 A0A0A0MQY5 61 aa5.63□□□□□ -1.51
HLA-DQA1-203ENST00000395363 Q8N9L7 120 aa5.62□□□□□ -1.51
HLA-DQA1-203ENST00000395363 TMEM254Q8TBM7 123 aa5.6□□□□□ -1.51
HLA-DQA1-203ENST00000395363 MRPL34Q9BQ48 92 aaKnown RBP5.6□□□□□ -1.51
HLA-DQA1-203ENST00000395363 NDUFS5O43920 106 aa5.59□□□□□ -1.51
HLA-DQA1-203ENST00000395363 FAM240AA0A1B0GVK7 77 aa5.58□□□□□ -1.52
HLA-DQA1-203ENST00000395363 hDV103S1A0JD37 113 aa5.58□□□□□ -1.52
HLA-DQA1-203ENST00000395363 Q5W150 140 aa5.58□□□□□ -1.52
HLA-DQA1-203ENST00000395363 BPY2O14599 106 aa5.57□□□□□ -1.52
HLA-DQA1-203ENST00000395363 ACYP1P07311 99 aa5.57□□□□□ -1.52
HLA-DQA1-203ENST00000395363 IGKV2D-30A0A075B6S6 120 aa5.56□□□□□ -1.52
HLA-DQA1-203ENST00000395363 IGKV2-30P06310 120 aa5.56□□□□□ -1.52
HLA-DQA1-203ENST00000395363 HCG22E2RYF7 251 aa5.5□□□□□ -1.53
HLA-DQA1-203ENST00000395363 CASC2Q6XLA1 102 aa5.49□□□□□ -1.53
HLA-DQA1-203ENST00000395363 UBL5Q9BZL1 73 aa5.49□□□□□ -1.53
HLA-DQA1-203ENST00000395363 H1FX-AS1Q4G0G2 97 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms