RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 H7BZZ5 65 aa8.12□□□□□ -1.11
CDC42SE2-202ENST00000395246 C8orf17Q9NRJ1 99 aa8.12□□□□□ -1.11
CDC42SE2-202ENST00000395246 RPS28P62857 69 aaKnown RBP8.11□□□□□ -1.11
CDC42SE2-202ENST00000395246 LIMD2Q9BT23 127 aa8.11□□□□□ -1.11
CDC42SE2-202ENST00000395246 TP53AIP1Q9HCN2 124 aa8.1□□□□□ -1.11
CDC42SE2-202ENST00000395246 KRTAP16-1A8MUX0 517 aa8.1□□□□□ -1.11
CDC42SE2-202ENST00000395246 C1orf195Q5TG92 126 aa8.1□□□□□ -1.11
CDC42SE2-202ENST00000395246 Q8N9P0 234 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE2-202ENST00000395246 NDUFB1O75438 58 aa8.08□□□□□ -1.12
CDC42SE2-202ENST00000395246 CASC2Q6XLA1 102 aa8.08□□□□□ -1.12
CDC42SE2-202ENST00000395246 ATP5EP56381 51 aaPredicted RBP8.06□□□□□ -1.12
CDC42SE2-202ENST00000395246 hDV103S1A0JD37 113 aa8.05□□□□□ -1.12
CDC42SE2-202ENST00000395246 PLA2G1BP04054 148 aaKnown RBP8.05□□□□□ -1.12
CDC42SE2-202ENST00000395246 KRTAP10-8P60410 259 aa8.05□□□□□ -1.12
CDC42SE2-202ENST00000395246 DEFB116Q30KQ4 102 aa8.03□□□□□ -1.12
CDC42SE2-202ENST00000395246 MRPL34Q9BQ48 92 aaKnown RBP8.02□□□□□ -1.13
CDC42SE2-202ENST00000395246 TYMSOSQ8TAI1 123 aa8.01□□□□□ -1.13
CDC42SE2-202ENST00000395246 C20orf197Q8N268 126 aa7.99□□□□□ -1.13
CDC42SE2-202ENST00000395246 KRTAP17-1Q9BYP8 105 aa7.99□□□□□ -1.13
CDC42SE2-202ENST00000395246 SPANXA2-OT1Q8N9U9 137 aa7.99□□□□□ -1.13
CDC42SE2-202ENST00000395246 NOTCH2NLQ7Z3S9 236 aa7.98□□□□□ -1.13
CDC42SE2-202ENST00000395246 CYP4F30PQ9H0H9 118 aa7.97□□□□□ -1.13
CDC42SE2-202ENST00000395246 LINC00304Q8N9R0 145 aa7.97□□□□□ -1.13
CDC42SE2-202ENST00000395246 TRAV22A0A0B4J277 110 aa7.95□□□□□ -1.14
CDC42SE2-202ENST00000395246 HRCT1Q6UXD1 115 aa7.95□□□□□ -1.14
CDC42SE2-202ENST00000395246 PRR26Q8N8Z3 221 aa7.93□□□□□ -1.14
CDC42SE2-202ENST00000395246 WFDC13Q8IUB5 93 aa7.92□□□□□ -1.14
CDC42SE2-202ENST00000395246 FAM229AH3BQW9 127 aa7.91□□□□□ -1.14
CDC42SE2-202ENST00000395246 Q8N1X5 172 aa7.9□□□□□ -1.14
CDC42SE2-202ENST00000395246 IGHV6-1A0A0B4J1U7 121 aa7.89□□□□□ -1.15
CDC42SE2-202ENST00000395246 LINC00313P59037 77 aa7.89□□□□□ -1.15
CDC42SE2-202ENST00000395246 EPPK1P58107 5090 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-202ENST00000395246 FAM236DA0A1B0GTK5 79 aa7.88□□□□□ -1.15
CDC42SE2-202ENST00000395246 SMR3BP02814 79 aaPredicted RBP7.88□□□□□ -1.15
CDC42SE2-202ENST00000395246 FAM236CP0DP71 79 aa7.88□□□□□ -1.15
CDC42SE2-202ENST00000395246 C20orf166-AS1Q96NR2 134 aa7.88□□□□□ -1.15
CDC42SE2-202ENST00000395246 H0Y9P7 68 aa7.88□□□□□ -1.15
CDC42SE2-202ENST00000395246 Q5VSD8 79 aa7.88□□□□□ -1.15
CDC42SE2-202ENST00000395246 SERP1Q9Y6X1 66 aa7.87□□□□□ -1.15
CDC42SE2-202ENST00000395246 MP68P56378 58 aa7.87□□□□□ -1.15
CDC42SE2-202ENST00000395246 SNURFQ9Y675 71 aa7.87□□□□□ -1.15
CDC42SE2-202ENST00000395246 A8MUU9 505 aa7.86□□□□□ -1.15
CDC42SE2-202ENST00000395246 MT1HL1P0DM35 61 aa7.86□□□□□ -1.15
CDC42SE2-202ENST00000395246 C4orf48Q5BLP8 95 aa7.84□□□□□ -1.15
CDC42SE2-202ENST00000395246 FP248Q71RG6 208 aaPredicted RBP7.84□□□□□ -1.15
CDC42SE2-202ENST00000395246 LOC101927531A0A1B0GV80 90 aa7.84□□□□□ -1.15
CDC42SE2-202ENST00000395246 IGLV7-46A0A075B6I9 117 aa7.84□□□□□ -1.15
CDC42SE2-202ENST00000395246 OXTP01178 125 aa7.82□□□□□ -1.16
CDC42SE2-202ENST00000395246 Q5W150 140 aa7.82□□□□□ -1.16
CDC42SE2-202ENST00000395246 C1orf64Q8NEQ6 169 aa7.8□□□□□ -1.16
CDC42SE2-202ENST00000395246 LRP1Q07954 4544 aaKnown RBP7.79□□□□□ -1.16
CDC42SE2-202ENST00000395246 IGKV2-30P06310 120 aa7.77□□□□□ -1.17
CDC42SE2-202ENST00000395246 LINC00208Q96KT6 92 aa7.76□□□□□ -1.17
CDC42SE2-202ENST00000395246 Q75L30 129 aa7.75□□□□□ -1.17
CDC42SE2-202ENST00000395246 KIAA1109Q2LD37 5005 aa7.72□□□□□ -1.17
CDC42SE2-202ENST00000395246 HERC2O95714 4834 aa7.7□□□□□ -1.18
CDC42SE2-202ENST00000395246 FLG2Q5D862 2391 aaPredicted RBP7.67□□□□□ -1.18
CDC42SE2-202ENST00000395246 MUC17Q685J3 4493 aa7.66□□□□□ -1.18
CDC42SE2-202ENST00000395246 DMAC1Q96GE9 116 aa7.65□□□□□ -1.18
CDC42SE2-202ENST00000395246 SMIM26A0A096LP01 95 aa7.64□□□□□ -1.19
CDC42SE2-202ENST00000395246 MYCBP2O75592 4640 aa7.64□□□□□ -1.19
CDC42SE2-202ENST00000395246 BIRC6Q9NR09 4857 aa7.64□□□□□ -1.19
CDC42SE2-202ENST00000395246 Q1T7F1 81 aa7.62□□□□□ -1.19
CDC42SE2-202ENST00000395246 XP32Q5T750 250 aa7.6□□□□□ -1.19
CDC42SE2-202ENST00000395246 NDUFS5O43920 106 aa7.59□□□□□ -1.19
CDC42SE2-202ENST00000395246 TPRXLQ17RH7 258 aa7.59□□□□□ -1.19
CDC42SE2-202ENST00000395246 RPL37P61927 97 aaKnown RBP7.57□□□□□ -1.2
CDC42SE2-202ENST00000395246 ABCA13Q86UQ4 5058 aa7.57□□□□□ -1.2
CDC42SE2-202ENST00000395246 A8MUN3 132 aa7.56□□□□□ -1.2
CDC42SE2-202ENST00000395246 HRES1P13985 223 aa7.56□□□□□ -1.2
CDC42SE2-202ENST00000395246 IGKV2D-30A0A075B6S6 120 aa7.56□□□□□ -1.2
CDC42SE2-202ENST00000395246 C7orf65Q6ZTY9 151 aa7.54□□□□□ -1.2
CDC42SE2-202ENST00000395246 KRTAP4-5Q9BYR2 181 aa7.53□□□□□ -1.2
CDC42SE2-202ENST00000395246 COA5Q86WW8 74 aa7.49□□□□□ -1.21
CDC42SE2-202ENST00000395246 ACYP2P14621 99 aa7.47□□□□□ -1.21
CDC42SE2-202ENST00000395246 V9GYY9 64 aa7.46□□□□□ -1.22
CDC42SE2-202ENST00000395246 PCOTHQ58A44 107 aa7.46□□□□□ -1.22
CDC42SE2-202ENST00000395246 MPLKIPQ8TAP9 179 aa7.45□□□□□ -1.22
CDC42SE2-202ENST00000395246 RETNLBQ9BQ08 111 aa7.45□□□□□ -1.22
CDC42SE2-202ENST00000395246 KRTAP3-1Q9BYR8 98 aa7.43□□□□□ -1.22
CDC42SE2-202ENST00000395246 LINC01558Q9Y6Z2 57 aa7.42□□□□□ -1.22
CDC42SE2-202ENST00000395246 C9orf92A6NGG3 77 aa7.42□□□□□ -1.22
CDC42SE2-202ENST00000395246 SPINK7P58062 85 aa7.36□□□□□ -1.23
CDC42SE2-202ENST00000395246 C4orf26Q17RF5 130 aa7.33□□□□□ -1.24
CDC42SE2-202ENST00000395246 COX6B2Q6YFQ2 88 aa7.33□□□□□ -1.24
CDC42SE2-202ENST00000395246 PRR4Q16378 134 aa7.32□□□□□ -1.24
CDC42SE2-202ENST00000395246 ATP11AUNQ6ZP68 121 aa7.31□□□□□ -1.24
CDC42SE2-202ENST00000395246 Q5VV11 94 aa7.28□□□□□ -1.24
CDC42SE2-202ENST00000395246 LPAP08519 4548 aa7.25□□□□□ -1.25
CDC42SE2-202ENST00000395246 KRTAP19-2Q3LHN2 52 aa7.22□□□□□ -1.25
CDC42SE2-202ENST00000395246 LRP2P98164 4655 aa7.22□□□□□ -1.25
CDC42SE2-202ENST00000395246 KRTAP3-3Q9BYR6 98 aa7.21□□□□□ -1.25
CDC42SE2-202ENST00000395246 PCLOQ9Y6V0 5065 aa7.17□□□□□ -1.26
CDC42SE2-202ENST00000395246 SPTSSBQ8NFR3 76 aa7.15□□□□□ -1.26
CDC42SE2-202ENST00000395246 HMCN2Q8NDA2 5059 aa7.14□□□□□ -1.27
CDC42SE2-202ENST00000395246 SEC61BP60468 96 aaKnown RBP7.13□□□□□ -1.27
CDC42SE2-202ENST00000395246 SVIPQ8NHG7 77 aa7.11□□□□□ -1.27
CDC42SE2-202ENST00000395246 H1FX-AS1Q4G0G2 97 aa7.1□□□□□ -1.27
CDC42SE2-202ENST00000395246 CHKB-CPT1BH3BT56 60 aa7.09□□□□□ -1.27
CDC42SE2-202ENST00000395246 PRO0628Q9UI54 55 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms