RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 CIRBP-AS1Q8TBR5 109 aa8.35□□□□□ -1.07
SNCA-204ENST00000394989 Q96NJ1 140 aa8.34□□□□□ -1.07
SNCA-204ENST00000394989 A8MWP4 228 aa8.34□□□□□ -1.07
SNCA-204ENST00000394989 KRTAP29-1A8MX34 341 aaPredicted RBP8.34□□□□□ -1.07
SNCA-204ENST00000394989 IGLV7-43P04211 117 aa8.34□□□□□ -1.07
SNCA-204ENST00000394989 MOBPQ13875 183 aa8.34□□□□□ -1.07
SNCA-204ENST00000394989 NDUFB1O75438 58 aa8.33□□□□□ -1.08
SNCA-204ENST00000394989 Q8N9P0 234 aaPredicted RBP8.33□□□□□ -1.08
SNCA-204ENST00000394989 CYP4F30PQ9H0H9 118 aa8.33□□□□□ -1.08
SNCA-204ENST00000394989 SACSQ9NZJ4 4579 aa8.33□□□□□ -1.08
SNCA-204ENST00000394989 CASC2Q6XLA1 102 aa8.32□□□□□ -1.08
SNCA-204ENST00000394989 PKHD1P08F94 4074 aa8.31□□□□□ -1.08
SNCA-204ENST00000394989 VPS13BQ7Z7G8 4022 aa8.3□□□□□ -1.08
SNCA-204ENST00000394989 SPAG11AQ6PDA7 123 aa8.29□□□□□ -1.08
SNCA-204ENST00000394989 KRTAP10-1P60331 282 aa8.29□□□□□ -1.08
SNCA-204ENST00000394989 Q6ZSA8 131 aa8.29□□□□□ -1.08
SNCA-204ENST00000394989 LCA10Q71F78 164 aa8.28□□□□□ -1.08
SNCA-204ENST00000394989 MMP24-AS1A0A0U1RRL7 71 aa8.26□□□□□ -1.09
SNCA-204ENST00000394989 COA5Q86WW8 74 aa8.25□□□□□ -1.09
SNCA-204ENST00000394989 CD164Q04900 197 aa8.25□□□□□ -1.09
SNCA-204ENST00000394989 RBM12B-AS1Q9P1G2 102 aa8.25□□□□□ -1.09
SNCA-204ENST00000394989 LIMD2Q9BT23 127 aa8.23□□□□□ -1.09
SNCA-204ENST00000394989 NDUFS5O43920 106 aa8.23□□□□□ -1.09
SNCA-204ENST00000394989 KTN1-AS1Q86SY8 53 aa8.21□□□□□ -1.09
SNCA-204ENST00000394989 ASB16-AS1Q495Z4 193 aa8.2□□□□□ -1.1
SNCA-204ENST00000394989 A0A087X002 238 aa8.18□□□□□ -1.1
SNCA-204ENST00000394989 A0A1B0GVX0 72 aa8.17□□□□□ -1.1
SNCA-204ENST00000394989 C8orf17Q9NRJ1 99 aa8.17□□□□□ -1.1
SNCA-204ENST00000394989 IGHV6-1A0A0B4J1U7 121 aa8.16□□□□□ -1.1
SNCA-204ENST00000394989 NOTCH2NLQ7Z3S9 236 aa8.16□□□□□ -1.1
SNCA-204ENST00000394989 KRTAP13-2Q52LG2 175 aa8.15□□□□□ -1.11
SNCA-204ENST00000394989 SPINK7P58062 85 aa8.14□□□□□ -1.11
SNCA-204ENST00000394989 SSBP3-AS1Q7Z2R9 100 aa8.14□□□□□ -1.11
SNCA-204ENST00000394989 ATP11AUNQ6ZP68 121 aa8.14□□□□□ -1.11
SNCA-204ENST00000394989 SPANXA2-OT1Q8N9U9 137 aa8.14□□□□□ -1.11
SNCA-204ENST00000394989 DYNC1H1Q14204 4646 aaKnown RBP8.14□□□□□ -1.11
SNCA-204ENST00000394989 LOC101927531A0A1B0GV80 90 aa8.13□□□□□ -1.11
SNCA-204ENST00000394989 KRTAP1-4P0C5Y4 121 aa8.12□□□□□ -1.11
SNCA-204ENST00000394989 SPINK6Q6UWN8 80 aa8.12□□□□□ -1.11
SNCA-204ENST00000394989 Q75L30 129 aa8.11□□□□□ -1.11
SNCA-204ENST00000394989 CDK2AP2O75956 126 aa8.1□□□□□ -1.11
SNCA-204ENST00000394989 H3BPC8 53 aa8.09□□□□□ -1.11
SNCA-204ENST00000394989 PRR26Q8N8Z3 221 aa8.09□□□□□ -1.11
SNCA-204ENST00000394989 PRAC1Q96KF2 57 aa8.09□□□□□ -1.11
SNCA-204ENST00000394989 A6NN06 94 aa8.08□□□□□ -1.12
SNCA-204ENST00000394989 RYR2Q92736 4967 aa8.08□□□□□ -1.12
SNCA-204ENST00000394989 IGLV7-46A0A075B6I9 117 aa8.08□□□□□ -1.12
SNCA-204ENST00000394989 KMT2CQ8NEZ4 4911 aaKnown RBP8.08□□□□□ -1.12
SNCA-204ENST00000394989 CDC42SE1Q9NRR8 79 aa8.07□□□□□ -1.12
SNCA-204ENST00000394989 MRPL34Q9BQ48 92 aaKnown RBP8.07□□□□□ -1.12
SNCA-204ENST00000394989 TP53AIP1Q9HCN2 124 aa8.06□□□□□ -1.12
SNCA-204ENST00000394989 APOBP04114 4563 aaKnown RBP8.06□□□□□ -1.12
SNCA-204ENST00000394989 FAT1Q14517 4588 aa8.04□□□□□ -1.12
SNCA-204ENST00000394989 HRES1P13985 223 aa8.04□□□□□ -1.12
SNCA-204ENST00000394989 ADM2Q7Z4H4 148 aa8.03□□□□□ -1.12
SNCA-204ENST00000394989 C7orf65Q6ZTY9 151 aa8.01□□□□□ -1.13
SNCA-204ENST00000394989 RETNLBQ9BQ08 111 aa8□□□□□ -1.13
SNCA-204ENST00000394989 A0A1B0GVY2 172 aa8□□□□□ -1.13
SNCA-204ENST00000394989 PLA2G1BP04054 148 aaKnown RBP8□□□□□ -1.13
SNCA-204ENST00000394989 LINC01558Q9Y6Z2 57 aa7.99□□□□□ -1.13
SNCA-204ENST00000394989 Q5W150 140 aa7.97□□□□□ -1.13
SNCA-204ENST00000394989 KRTAP13-3Q3SY46 172 aa7.96□□□□□ -1.13
SNCA-204ENST00000394989 LINC00313P59037 77 aa7.96□□□□□ -1.14
SNCA-204ENST00000394989 SMR3BP02814 79 aaPredicted RBP7.95□□□□□ -1.14
SNCA-204ENST00000394989 C8orf87E5RJ46 101 aa7.95□□□□□ -1.14
SNCA-204ENST00000394989 TYMSOSQ8TAI1 123 aa7.94□□□□□ -1.14
SNCA-204ENST00000394989 PKHD1L1Q86WI1 4243 aa7.92□□□□□ -1.14
SNCA-204ENST00000394989 KRTAP10-4P60372 401 aaPredicted RBP7.9□□□□□ -1.14
SNCA-204ENST00000394989 KRTAP16-1A8MUX0 517 aa7.89□□□□□ -1.15
SNCA-204ENST00000394989 SPINK1P00995 79 aa7.88□□□□□ -1.15
SNCA-204ENST00000394989 C4orf48Q5BLP8 95 aa7.87□□□□□ -1.15
SNCA-204ENST00000394989 RYR3Q15413 4870 aa7.85□□□□□ -1.15
SNCA-204ENST00000394989 LINC00304Q8N9R0 145 aa7.83□□□□□ -1.16
SNCA-204ENST00000394989 A0A1B0GU69 56 aa7.81□□□□□ -1.16
SNCA-204ENST00000394989 FAM229AH3BQW9 127 aa7.81□□□□□ -1.16
SNCA-204ENST00000394989 RPS29P62273 56 aaKnown RBP7.79□□□□□ -1.16
SNCA-204ENST00000394989 ACYP2P14621 99 aa7.78□□□□□ -1.16
SNCA-204ENST00000394989 HSPG2P98160 4391 aa7.77□□□□□ -1.17
SNCA-204ENST00000394989 FLG2Q5D862 2391 aaPredicted RBP7.76□□□□□ -1.17
SNCA-204ENST00000394989 IGKV2-30P06310 120 aa7.75□□□□□ -1.17
SNCA-204ENST00000394989 LRP1Q07954 4544 aaKnown RBP7.74□□□□□ -1.17
SNCA-204ENST00000394989 LINC01554Q52M75 96 aa7.73□□□□□ -1.17
SNCA-204ENST00000394989 TNXBP22105 4242 aa7.72□□□□□ -1.17
SNCA-204ENST00000394989 H3BS24 57 aa7.71□□□□□ -1.18
SNCA-204ENST00000394989 MIR22HGQ0VDD5 57 aa7.7□□□□□ -1.18
SNCA-204ENST00000394989 CSAG1Q6PB30 78 aa7.7□□□□□ -1.18
SNCA-204ENST00000394989 IGKV2D-30A0A075B6S6 120 aa7.69□□□□□ -1.18
SNCA-204ENST00000394989 RYR1P21817 5038 aa7.67□□□□□ -1.18
SNCA-204ENST00000394989 DMAC1Q96GE9 116 aa7.67□□□□□ -1.18
SNCA-204ENST00000394989 FAT3Q8TDW7 4589 aa7.66□□□□□ -1.18
SNCA-204ENST00000394989 UQCR11O14957 56 aa7.65□□□□□ -1.19
SNCA-204ENST00000394989 C9orf92A6NGG3 77 aa7.64□□□□□ -1.19
SNCA-204ENST00000394989 SPATA8Q6RVD6 105 aa7.6□□□□□ -1.19
SNCA-204ENST00000394989 KRTAP17-1Q9BYP8 105 aa7.6□□□□□ -1.19
SNCA-204ENST00000394989 KIAA1109Q2LD37 5005 aa7.59□□□□□ -1.19
SNCA-204ENST00000394989 Q5VSD8 79 aa7.59□□□□□ -1.2
SNCA-204ENST00000394989 Q8N1X5 172 aa7.59□□□□□ -1.2
SNCA-204ENST00000394989 C20orf166-AS1Q96NR2 134 aa7.59□□□□□ -1.2
SNCA-204ENST00000394989 A8MUU9 505 aa7.58□□□□□ -1.2
SNCA-204ENST00000394989 MYCBP2O75592 4640 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms