RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 TGP01266 2768 aa7.48□□□□□ -1.21
PPP3CB-204ENST00000394829 RTL8CO15255 209 aa7.48□□□□□ -1.21
PPP3CB-204ENST00000394829 C8orf17Q9NRJ1 99 aa7.48□□□□□ -1.21
PPP3CB-204ENST00000394829 IGHV6-1A0A0B4J1U7 121 aa7.47□□□□□ -1.21
PPP3CB-204ENST00000394829 C8orf87E5RJ46 101 aa7.47□□□□□ -1.21
PPP3CB-204ENST00000394829 IGLV5-52A0A0A0MRZ9 124 aa7.47□□□□□ -1.21
PPP3CB-204ENST00000394829 PCOTHQ58A44 107 aa7.47□□□□□ -1.21
PPP3CB-204ENST00000394829 ATP11AUNQ6ZP68 121 aa7.47□□□□□ -1.21
PPP3CB-204ENST00000394829 ADM2Q7Z4H4 148 aa7.45□□□□□ -1.22
PPP3CB-204ENST00000394829 ZNF706Q9Y5V0 76 aaPredicted RBP7.45□□□□□ -1.22
PPP3CB-204ENST00000394829 SPAG11AQ6PDA7 123 aa7.45□□□□□ -1.22
PPP3CB-204ENST00000394829 A0A087X002 238 aa7.44□□□□□ -1.22
PPP3CB-204ENST00000394829 A0A1B0GVX0 72 aa7.44□□□□□ -1.22
PPP3CB-204ENST00000394829 NDUFS5O43920 106 aa7.44□□□□□ -1.22
PPP3CB-204ENST00000394829 NOTCH2NLQ7Z3S9 236 aa7.44□□□□□ -1.22
PPP3CB-204ENST00000394829 LIMD2Q9BT23 127 aa7.44□□□□□ -1.22
PPP3CB-204ENST00000394829 IGLV7-46A0A075B6I9 117 aa7.43□□□□□ -1.22
PPP3CB-204ENST00000394829 H3BS24 57 aa7.43□□□□□ -1.22
PPP3CB-204ENST00000394829 ZNF861PO60384 105 aa7.43□□□□□ -1.22
PPP3CB-204ENST00000394829 TP53AIP1Q9HCN2 124 aa7.43□□□□□ -1.22
PPP3CB-204ENST00000394829 SPINK7P58062 85 aa7.43□□□□□ -1.22
PPP3CB-204ENST00000394829 PLAC8Q9NZF1 115 aa7.43□□□□□ -1.22
PPP3CB-204ENST00000394829 C7orf65Q6ZTY9 151 aa7.42□□□□□ -1.22
PPP3CB-204ENST00000394829 Q6ZR54 194 aa7.42□□□□□ -1.22
PPP3CB-204ENST00000394829 COA5Q86WW8 74 aa7.42□□□□□ -1.22
PPP3CB-204ENST00000394829 DNAH6Q9C0G6 4158 aa7.41□□□□□ -1.22
PPP3CB-204ENST00000394829 Q75L30 129 aa7.41□□□□□ -1.22
PPP3CB-204ENST00000394829 ALMS1Q8TCU4 4167 aa7.41□□□□□ -1.22
PPP3CB-204ENST00000394829 CDK2AP2O75956 126 aa7.41□□□□□ -1.22
PPP3CB-204ENST00000394829 MRPL34Q9BQ48 92 aaKnown RBP7.4□□□□□ -1.23
PPP3CB-204ENST00000394829 DNAH11Q96DT5 4516 aa7.39□□□□□ -1.23
PPP3CB-204ENST00000394829 CDC42SE1Q9NRR8 79 aa7.38□□□□□ -1.23
PPP3CB-204ENST00000394829 SPINK6Q6UWN8 80 aa7.38□□□□□ -1.23
PPP3CB-204ENST00000394829 LOC101927531A0A1B0GV80 90 aa7.36□□□□□ -1.23
PPP3CB-204ENST00000394829 LINC00313P59037 77 aa7.36□□□□□ -1.23
PPP3CB-204ENST00000394829 DNAH5Q8TE73 4624 aa7.36□□□□□ -1.23
PPP3CB-204ENST00000394829 CIRBP-AS1Q8TBR5 109 aa7.34□□□□□ -1.23
PPP3CB-204ENST00000394829 IGLV7-43P04211 117 aa7.34□□□□□ -1.23
PPP3CB-204ENST00000394829 HYDINQ4G0P3 5121 aa7.33□□□□□ -1.24
PPP3CB-204ENST00000394829 Q5W150 140 aa7.32□□□□□ -1.24
PPP3CB-204ENST00000394829 LY6G6CO95867 125 aa7.32□□□□□ -1.24
PPP3CB-204ENST00000394829 C1orf134Q5TEV5 83 aa7.32□□□□□ -1.24
PPP3CB-204ENST00000394829 HRES1P13985 223 aa7.3□□□□□ -1.24
PPP3CB-204ENST00000394829 KRTAP13-3Q3SY46 172 aa7.27□□□□□ -1.25
PPP3CB-204ENST00000394829 LRP1BQ9NZR2 4599 aa7.27□□□□□ -1.25
PPP3CB-204ENST00000394829 FAT2Q9NYQ8 4349 aa7.25□□□□□ -1.25
PPP3CB-204ENST00000394829 KRTAP10-2P60368 255 aa7.25□□□□□ -1.25
PPP3CB-204ENST00000394829 LINC01558Q9Y6Z2 57 aa7.24□□□□□ -1.25
PPP3CB-204ENST00000394829 PKD1P98161 4303 aa7.23□□□□□ -1.25
PPP3CB-204ENST00000394829 SSBP3-AS1Q7Z2R9 100 aa7.23□□□□□ -1.25
PPP3CB-204ENST00000394829 PRR26Q8N8Z3 221 aa7.23□□□□□ -1.25
PPP3CB-204ENST00000394829 SACSQ9NZJ4 4579 aa7.21□□□□□ -1.25
PPP3CB-204ENST00000394829 LINC01554Q52M75 96 aa7.21□□□□□ -1.26
PPP3CB-204ENST00000394829 KRTAP13-2Q52LG2 175 aa7.2□□□□□ -1.26
PPP3CB-204ENST00000394829 RETNLBQ9BQ08 111 aa7.2□□□□□ -1.26
PPP3CB-204ENST00000394829 VPS13BQ7Z7G8 4022 aa7.17□□□□□ -1.26
PPP3CB-204ENST00000394829 KRTAP10-1P60331 282 aa7.14□□□□□ -1.27
PPP3CB-204ENST00000394829 ACYP2P14621 99 aa7.14□□□□□ -1.27
PPP3CB-204ENST00000394829 FAM229AH3BQW9 127 aa7.12□□□□□ -1.27
PPP3CB-204ENST00000394829 Q6ZSA8 131 aa7.12□□□□□ -1.27
PPP3CB-204ENST00000394829 DMAC1Q96GE9 116 aa7.11□□□□□ -1.27
PPP3CB-204ENST00000394829 KRTAP16-1A8MUX0 517 aa7.1□□□□□ -1.27
PPP3CB-204ENST00000394829 KRTAP1-4P0C5Y4 121 aa7.1□□□□□ -1.27
PPP3CB-204ENST00000394829 IGKV2-30P06310 120 aa7.1□□□□□ -1.27
PPP3CB-204ENST00000394829 CSAG1Q6PB30 78 aa7.1□□□□□ -1.27
PPP3CB-204ENST00000394829 PKHD1P08F94 4074 aa7.08□□□□□ -1.28
PPP3CB-204ENST00000394829 PLA2G1BP04054 148 aaKnown RBP7.07□□□□□ -1.28
PPP3CB-204ENST00000394829 RYR2Q92736 4967 aa7.07□□□□□ -1.28
PPP3CB-204ENST00000394829 KMT2CQ8NEZ4 4911 aaKnown RBP7.06□□□□□ -1.28
PPP3CB-204ENST00000394829 IGKV2D-30A0A075B6S6 120 aa7.03□□□□□ -1.28
PPP3CB-204ENST00000394829 TYMSOSQ8TAI1 123 aa7□□□□□ -1.29
PPP3CB-204ENST00000394829 FLG2Q5D862 2391 aaPredicted RBP6.99□□□□□ -1.29
PPP3CB-204ENST00000394829 A0A1B0GU69 56 aa6.98□□□□□ -1.29
PPP3CB-204ENST00000394829 A0A1B0GVY2 172 aa6.96□□□□□ -1.3
PPP3CB-204ENST00000394829 SPINK1P00995 79 aa6.95□□□□□ -1.3
PPP3CB-204ENST00000394829 DYNC1H1Q14204 4646 aaKnown RBP6.94□□□□□ -1.3
PPP3CB-204ENST00000394829 MIR22HGQ0VDD5 57 aa6.92□□□□□ -1.3
PPP3CB-204ENST00000394829 SPATA8Q6RVD6 105 aa6.9□□□□□ -1.3
PPP3CB-204ENST00000394829 RYR3Q15413 4870 aa6.9□□□□□ -1.3
PPP3CB-204ENST00000394829 APOBP04114 4563 aaKnown RBP6.89□□□□□ -1.31
PPP3CB-204ENST00000394829 FAT1Q14517 4588 aa6.89□□□□□ -1.31
PPP3CB-204ENST00000394829 LINC00304Q8N9R0 145 aa6.89□□□□□ -1.31
PPP3CB-204ENST00000394829 Q8N1X5 172 aa6.88□□□□□ -1.31
PPP3CB-204ENST00000394829 SMR3BP02814 79 aaPredicted RBP6.86□□□□□ -1.31
PPP3CB-204ENST00000394829 UQCR11O14957 56 aa6.85□□□□□ -1.31
PPP3CB-204ENST00000394829 CRIPTQ9P021 101 aa6.84□□□□□ -1.31
PPP3CB-204ENST00000394829 PKHD1L1Q86WI1 4243 aa6.82□□□□□ -1.32
PPP3CB-204ENST00000394829 C9orf92A6NGG3 77 aa6.82□□□□□ -1.32
PPP3CB-204ENST00000394829 RPS29P62273 56 aaKnown RBP6.81□□□□□ -1.32
PPP3CB-204ENST00000394829 ROMO1P60602 79 aa6.76□□□□□ -1.33
PPP3CB-204ENST00000394829 KRTAP10-4P60372 401 aaPredicted RBP6.76□□□□□ -1.33
PPP3CB-204ENST00000394829 A8MUU9 505 aa6.74□□□□□ -1.33
PPP3CB-204ENST00000394829 C20orf166-AS1Q96NR2 134 aa6.74□□□□□ -1.33
PPP3CB-204ENST00000394829 KRTAP3-1Q9BYR8 98 aa6.73□□□□□ -1.33
PPP3CB-204ENST00000394829 HSPG2P98160 4391 aa6.72□□□□□ -1.33
PPP3CB-204ENST00000394829 P0C880 135 aa6.71□□□□□ -1.34
PPP3CB-204ENST00000394829 KRTAP25-1Q3LHN0 102 aa6.69□□□□□ -1.34
PPP3CB-204ENST00000394829 H0YAA0 97 aa6.65□□□□□ -1.35
PPP3CB-204ENST00000394829 EPPK1P58107 5090 aaKnown RBP6.65□□□□□ -1.35
PPP3CB-204ENST00000394829 RYR1P21817 5038 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms