RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CIRBP-AS1Q8TBR5 109 aa7.98□□□□□ -1.13
GTF2F1-201ENST00000394456 A8MUN3 132 aa7.97□□□□□ -1.13
GTF2F1-201ENST00000394456 Q1T7F1 81 aa7.97□□□□□ -1.13
GTF2F1-201ENST00000394456 ASB16-AS1Q495Z4 193 aa7.97□□□□□ -1.13
GTF2F1-201ENST00000394456 A8MU10 97 aa7.96□□□□□ -1.13
GTF2F1-201ENST00000394456 CD164Q04900 197 aa7.96□□□□□ -1.13
GTF2F1-201ENST00000394456 A0A1B0GVX0 72 aa7.96□□□□□ -1.14
GTF2F1-201ENST00000394456 KRTAP10-1P60331 282 aa7.94□□□□□ -1.14
GTF2F1-201ENST00000394456 ZNF706Q9Y5V0 76 aaPredicted RBP7.94□□□□□ -1.14
GTF2F1-201ENST00000394456 IGLV7-43P04211 117 aa7.94□□□□□ -1.14
GTF2F1-201ENST00000394456 LRP1BQ9NZR2 4599 aa7.93□□□□□ -1.14
GTF2F1-201ENST00000394456 H3BPC8 53 aa7.92□□□□□ -1.14
GTF2F1-201ENST00000394456 SPANXA2-OT1Q8N9U9 137 aa7.92□□□□□ -1.14
GTF2F1-201ENST00000394456 SACSQ9NZJ4 4579 aa7.89□□□□□ -1.15
GTF2F1-201ENST00000394456 CDK2AP2O75956 126 aa7.89□□□□□ -1.15
GTF2F1-201ENST00000394456 Q5W150 140 aa7.89□□□□□ -1.15
GTF2F1-201ENST00000394456 COA5Q86WW8 74 aa7.89□□□□□ -1.15
GTF2F1-201ENST00000394456 MRPL34Q9BQ48 92 aaKnown RBP7.89□□□□□ -1.15
GTF2F1-201ENST00000394456 Q8N9P0 234 aaPredicted RBP7.88□□□□□ -1.15
GTF2F1-201ENST00000394456 PKHD1P08F94 4074 aa7.88□□□□□ -1.15
GTF2F1-201ENST00000394456 IGLV7-46A0A075B6I9 117 aa7.87□□□□□ -1.15
GTF2F1-201ENST00000394456 Q5VV11 94 aa7.87□□□□□ -1.15
GTF2F1-201ENST00000394456 Q6ZSA8 131 aa7.87□□□□□ -1.15
GTF2F1-201ENST00000394456 TP53AIP1Q9HCN2 124 aa7.85□□□□□ -1.15
GTF2F1-201ENST00000394456 RETNLBQ9BQ08 111 aa7.84□□□□□ -1.15
GTF2F1-201ENST00000394456 PRR15LQ9BU68 103 aa7.84□□□□□ -1.15
GTF2F1-201ENST00000394456 VPS13BQ7Z7G8 4022 aa7.82□□□□□ -1.16
GTF2F1-201ENST00000394456 KRTAP13-2Q52LG2 175 aa7.8□□□□□ -1.16
GTF2F1-201ENST00000394456 HRES1P13985 223 aa7.8□□□□□ -1.16
GTF2F1-201ENST00000394456 SPAG11AQ6PDA7 123 aa7.79□□□□□ -1.16
GTF2F1-201ENST00000394456 KMT2CQ8NEZ4 4911 aaKnown RBP7.79□□□□□ -1.16
GTF2F1-201ENST00000394456 CHKB-CPT1BH3BT56 60 aa7.79□□□□□ -1.16
GTF2F1-201ENST00000394456 KRTAP13-3Q3SY46 172 aa7.79□□□□□ -1.16
GTF2F1-201ENST00000394456 C1orf195Q5TG92 126 aa7.77□□□□□ -1.17
GTF2F1-201ENST00000394456 V9GYY9 64 aa7.74□□□□□ -1.17
GTF2F1-201ENST00000394456 PRR26Q8N8Z3 221 aa7.73□□□□□ -1.17
GTF2F1-201ENST00000394456 LIMD2Q9BT23 127 aa7.73□□□□□ -1.17
GTF2F1-201ENST00000394456 DYNC1H1Q14204 4646 aaKnown RBP7.72□□□□□ -1.17
GTF2F1-201ENST00000394456 SSBP3-AS1Q7Z2R9 100 aa7.72□□□□□ -1.17
GTF2F1-201ENST00000394456 LCA10Q71F78 164 aa7.71□□□□□ -1.18
GTF2F1-201ENST00000394456 KRTAP1-4P0C5Y4 121 aa7.7□□□□□ -1.18
GTF2F1-201ENST00000394456 SMR3BP02814 79 aaPredicted RBP7.69□□□□□ -1.18
GTF2F1-201ENST00000394456 LINC00313P59037 77 aa7.69□□□□□ -1.18
GTF2F1-201ENST00000394456 LOC101927531A0A1B0GV80 90 aa7.68□□□□□ -1.18
GTF2F1-201ENST00000394456 RYR2Q92736 4967 aa7.67□□□□□ -1.18
GTF2F1-201ENST00000394456 A6NED7 52 aa7.67□□□□□ -1.18
GTF2F1-201ENST00000394456 Q75L30 129 aa7.66□□□□□ -1.18
GTF2F1-201ENST00000394456 PLA2G1BP04054 148 aaKnown RBP7.65□□□□□ -1.18
GTF2F1-201ENST00000394456 SPTSSBQ8NFR3 76 aa7.65□□□□□ -1.18
GTF2F1-201ENST00000394456 A0A1B0GVY2 172 aa7.65□□□□□ -1.19
GTF2F1-201ENST00000394456 SPINK7P58062 85 aa7.65□□□□□ -1.19
GTF2F1-201ENST00000394456 LINC01558Q9Y6Z2 57 aa7.65□□□□□ -1.19
GTF2F1-201ENST00000394456 FAT1Q14517 4588 aa7.64□□□□□ -1.19
GTF2F1-201ENST00000394456 KRTAP16-1A8MUX0 517 aa7.64□□□□□ -1.19
GTF2F1-201ENST00000394456 C8orf87E5RJ46 101 aa7.63□□□□□ -1.19
GTF2F1-201ENST00000394456 SEC61GP60059 68 aa7.62□□□□□ -1.19
GTF2F1-201ENST00000394456 APOBP04114 4563 aaKnown RBP7.61□□□□□ -1.19
GTF2F1-201ENST00000394456 PMAIP1Q13794 54 aa7.6□□□□□ -1.19
GTF2F1-201ENST00000394456 TYMSOSQ8TAI1 123 aa7.59□□□□□ -1.19
GTF2F1-201ENST00000394456 IGKV2D-30A0A075B6S6 120 aa7.58□□□□□ -1.2
GTF2F1-201ENST00000394456 IGKV2-30P06310 120 aa7.58□□□□□ -1.2
GTF2F1-201ENST00000394456 FAM229AH3BQW9 127 aa7.57□□□□□ -1.2
GTF2F1-201ENST00000394456 DMAC1Q96GE9 116 aa7.55□□□□□ -1.2
GTF2F1-201ENST00000394456 RYR3Q15413 4870 aa7.55□□□□□ -1.2
GTF2F1-201ENST00000394456 ACYP2P14621 99 aa7.55□□□□□ -1.2
GTF2F1-201ENST00000394456 C4orf48Q5BLP8 95 aa7.55□□□□□ -1.2
GTF2F1-201ENST00000394456 CDC42SE1Q9NRR8 79 aa7.52□□□□□ -1.21
GTF2F1-201ENST00000394456 KRTAP10-4P60372 401 aaPredicted RBP7.5□□□□□ -1.21
GTF2F1-201ENST00000394456 SPINK1P00995 79 aa7.49□□□□□ -1.21
GTF2F1-201ENST00000394456 LINC00304Q8N9R0 145 aa7.49□□□□□ -1.21
GTF2F1-201ENST00000394456 ATP11AUNQ6ZP68 121 aa7.48□□□□□ -1.21
GTF2F1-201ENST00000394456 A6NN06 94 aa7.46□□□□□ -1.22
GTF2F1-201ENST00000394456 Q8N1X5 172 aa7.45□□□□□ -1.22
GTF2F1-201ENST00000394456 C7orf65Q6ZTY9 151 aa7.43□□□□□ -1.22
GTF2F1-201ENST00000394456 C9orf92A6NGG3 77 aa7.43□□□□□ -1.22
GTF2F1-201ENST00000394456 A0A1B0GU69 56 aa7.4□□□□□ -1.23
GTF2F1-201ENST00000394456 PKHD1L1Q86WI1 4243 aa7.39□□□□□ -1.23
GTF2F1-201ENST00000394456 KTN1-AS1Q86SY8 53 aa7.37□□□□□ -1.23
GTF2F1-201ENST00000394456 HSPG2P98160 4391 aa7.37□□□□□ -1.23
GTF2F1-201ENST00000394456 LRP1Q07954 4544 aaKnown RBP7.37□□□□□ -1.23
GTF2F1-201ENST00000394456 RPS29P62273 56 aaKnown RBP7.36□□□□□ -1.23
GTF2F1-201ENST00000394456 FLG2Q5D862 2391 aaPredicted RBP7.33□□□□□ -1.24
GTF2F1-201ENST00000394456 Q5VSD8 79 aa7.32□□□□□ -1.24
GTF2F1-201ENST00000394456 ADM2Q7Z4H4 148 aa7.29□□□□□ -1.24
GTF2F1-201ENST00000394456 EPPK1P58107 5090 aaKnown RBP7.29□□□□□ -1.24
GTF2F1-201ENST00000394456 KIAA1109Q2LD37 5005 aa7.28□□□□□ -1.24
GTF2F1-201ENST00000394456 RYR1P21817 5038 aa7.28□□□□□ -1.24
GTF2F1-201ENST00000394456 KRTAP17-1Q9BYP8 105 aa7.28□□□□□ -1.24
GTF2F1-201ENST00000394456 PRAC1Q96KF2 57 aa7.27□□□□□ -1.25
GTF2F1-201ENST00000394456 RBM12B-AS1Q9P1G2 102 aa7.27□□□□□ -1.25
GTF2F1-201ENST00000394456 KRTAP3-1Q9BYR8 98 aa7.27□□□□□ -1.25
GTF2F1-201ENST00000394456 DMBT1Q9UGM3 2413 aaPredicted RBP7.26□□□□□ -1.25
GTF2F1-201ENST00000394456 TNXBP22105 4242 aa7.25□□□□□ -1.25
GTF2F1-201ENST00000394456 MIR22HGQ0VDD5 57 aa7.25□□□□□ -1.25
GTF2F1-201ENST00000394456 SPATA8Q6RVD6 105 aa7.25□□□□□ -1.25
GTF2F1-201ENST00000394456 MYCBP2O75592 4640 aa7.23□□□□□ -1.25
GTF2F1-201ENST00000394456 A8MUU9 505 aa7.22□□□□□ -1.25
GTF2F1-201ENST00000394456 UQCR11O14957 56 aa7.22□□□□□ -1.25
GTF2F1-201ENST00000394456 C20orf166-AS1Q96NR2 134 aa7.21□□□□□ -1.25
GTF2F1-201ENST00000394456 FAT3Q8TDW7 4589 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms