RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 Q6ZRN7 208 aaPredicted RBP6.05□□□□□ -1.44
PSEN1-204ENST00000394164 FBN3Q75N90 2809 aa6.04□□□□□ -1.44
PSEN1-204ENST00000394164 DYNC2H1Q8NCM8 4307 aaKnown RBP6.04□□□□□ -1.44
PSEN1-204ENST00000394164 DNAH2Q9P225 4427 aa6.03□□□□□ -1.44
PSEN1-204ENST00000394164 IGHV6-1A0A0B4J1U7 121 aa6.03□□□□□ -1.44
PSEN1-204ENST00000394164 H3BS24 57 aa6.03□□□□□ -1.44
PSEN1-204ENST00000394164 PLAC8Q9NZF1 115 aa6.02□□□□□ -1.45
PSEN1-204ENST00000394164 VPS13DQ5THJ4 4388 aa6.02□□□□□ -1.45
PSEN1-204ENST00000394164 A0A087WTM6 91 aa6.02□□□□□ -1.45
PSEN1-204ENST00000394164 LY6G6CO95867 125 aa6.02□□□□□ -1.45
PSEN1-204ENST00000394164 HECTD4Q9Y4D8 3996 aa6.02□□□□□ -1.45
PSEN1-204ENST00000394164 RTL8CO15255 209 aa6.01□□□□□ -1.45
PSEN1-204ENST00000394164 IGLV8-61A0A075B6I0 122 aa6□□□□□ -1.45
PSEN1-204ENST00000394164 SPACA4Q8TDM5 124 aa5.99□□□□□ -1.45
PSEN1-204ENST00000394164 DNAH6Q9C0G6 4158 aa5.98□□□□□ -1.45
PSEN1-204ENST00000394164 PSORS1C2Q9UIG4 136 aa5.98□□□□□ -1.45
PSEN1-204ENST00000394164 A0A087X002 238 aa5.96□□□□□ -1.45
PSEN1-204ENST00000394164 NOTCH2NLQ7Z3S9 236 aa5.96□□□□□ -1.45
PSEN1-204ENST00000394164 C8orf17Q9NRJ1 99 aa5.96□□□□□ -1.45
PSEN1-204ENST00000394164 IGLV5-52A0A0A0MRZ9 124 aa5.96□□□□□ -1.46
PSEN1-204ENST00000394164 LINC01554Q52M75 96 aa5.96□□□□□ -1.46
PSEN1-204ENST00000394164 DNAH17Q9UFH2 4485 aa5.94□□□□□ -1.46
PSEN1-204ENST00000394164 DNAH8Q96JB1 4490 aa5.94□□□□□ -1.46
PSEN1-204ENST00000394164 TP53AIP1Q9HCN2 124 aa5.94□□□□□ -1.46
PSEN1-204ENST00000394164 C1orf134Q5TEV5 83 aa5.93□□□□□ -1.46
PSEN1-204ENST00000394164 KRTAP13-1Q8IUC0 172 aa5.93□□□□□ -1.46
PSEN1-204ENST00000394164 RETNLBQ9BQ08 111 aa5.93□□□□□ -1.46
PSEN1-204ENST00000394164 Q96NJ1 140 aa5.93□□□□□ -1.46
PSEN1-204ENST00000394164 CDK2AP2O75956 126 aa5.92□□□□□ -1.46
PSEN1-204ENST00000394164 SPRR1BP22528 89 aa5.92□□□□□ -1.46
PSEN1-204ENST00000394164 SPINK6Q6UWN8 80 aa5.92□□□□□ -1.46
PSEN1-204ENST00000394164 Q6ZR54 194 aa5.92□□□□□ -1.46
PSEN1-204ENST00000394164 HYDINQ4G0P3 5121 aa5.91□□□□□ -1.46
PSEN1-204ENST00000394164 DNAH11Q96DT5 4516 aa5.91□□□□□ -1.46
PSEN1-204ENST00000394164 LCE2DQ5TA82 110 aaPredicted RBP5.91□□□□□ -1.46
PSEN1-204ENST00000394164 Q5W150 140 aa5.9□□□□□ -1.46
PSEN1-204ENST00000394164 KRTAP10-2P60368 255 aa5.9□□□□□ -1.47
PSEN1-204ENST00000394164 MRPL34Q9BQ48 92 aaKnown RBP5.9□□□□□ -1.47
PSEN1-204ENST00000394164 A0A1B0GU69 56 aa5.89□□□□□ -1.47
PSEN1-204ENST00000394164 A0A1B0GVX0 72 aa5.89□□□□□ -1.47
PSEN1-204ENST00000394164 CSAG1Q6PB30 78 aa5.88□□□□□ -1.47
PSEN1-204ENST00000394164 CIRBP-AS1Q8TBR5 109 aa5.88□□□□□ -1.47
PSEN1-204ENST00000394164 PLA2G1BP04054 148 aaKnown RBP5.88□□□□□ -1.47
PSEN1-204ENST00000394164 ZNF861PO60384 105 aa5.87□□□□□ -1.47
PSEN1-204ENST00000394164 WWC2-AS2Q96NR7 200 aa5.87□□□□□ -1.47
PSEN1-204ENST00000394164 ASB16-AS1Q495Z4 193 aa5.86□□□□□ -1.47
PSEN1-204ENST00000394164 ACYP2P14621 99 aa5.85□□□□□ -1.47
PSEN1-204ENST00000394164 DNAH5Q8TE73 4624 aa5.85□□□□□ -1.47
PSEN1-204ENST00000394164 MIR22HGQ0VDD5 57 aa5.84□□□□□ -1.47
PSEN1-204ENST00000394164 IGLV7-43P04211 117 aa5.82□□□□□ -1.48
PSEN1-204ENST00000394164 ZNF706Q9Y5V0 76 aaPredicted RBP5.82□□□□□ -1.48
PSEN1-204ENST00000394164 ALMS1Q8TCU4 4167 aa5.82□□□□□ -1.48
PSEN1-204ENST00000394164 LINC00483Q53H64 154 aa5.82□□□□□ -1.48
PSEN1-204ENST00000394164 LRP1BQ9NZR2 4599 aa5.82□□□□□ -1.48
PSEN1-204ENST00000394164 KRTAP10-1P60331 282 aa5.79□□□□□ -1.48
PSEN1-204ENST00000394164 SPATA8Q6RVD6 105 aa5.79□□□□□ -1.48
PSEN1-204ENST00000394164 UQCR11O14957 56 aa5.78□□□□□ -1.48
PSEN1-204ENST00000394164 PKHD1P08F94 4074 aa5.76□□□□□ -1.49
PSEN1-204ENST00000394164 SPINK1P00995 79 aa5.75□□□□□ -1.49
PSEN1-204ENST00000394164 DMAC1Q96GE9 116 aa5.74□□□□□ -1.49
PSEN1-204ENST00000394164 FAT2Q9NYQ8 4349 aa5.74□□□□□ -1.49
PSEN1-204ENST00000394164 VPS13BQ7Z7G8 4022 aa5.74□□□□□ -1.49
PSEN1-204ENST00000394164 KRTAP13-3Q3SY46 172 aa5.74□□□□□ -1.49
PSEN1-204ENST00000394164 PKD1P98161 4303 aa5.72□□□□□ -1.49
PSEN1-204ENST00000394164 FLG2Q5D862 2391 aaPredicted RBP5.71□□□□□ -1.49
PSEN1-204ENST00000394164 IGKV2D-30A0A075B6S6 120 aa5.71□□□□□ -1.5
PSEN1-204ENST00000394164 IGKV2-30P06310 120 aa5.71□□□□□ -1.5
PSEN1-204ENST00000394164 KRTAP13-2Q52LG2 175 aa5.71□□□□□ -1.5
PSEN1-204ENST00000394164 SMR3BP02814 79 aaPredicted RBP5.7□□□□□ -1.5
PSEN1-204ENST00000394164 CRIPTQ9P021 101 aa5.68□□□□□ -1.5
PSEN1-204ENST00000394164 SSBP3-AS1Q7Z2R9 100 aa5.65□□□□□ -1.5
PSEN1-204ENST00000394164 Q6ZSA8 131 aa5.63□□□□□ -1.51
PSEN1-204ENST00000394164 FAT1Q14517 4588 aa5.63□□□□□ -1.51
PSEN1-204ENST00000394164 FAM229AH3BQW9 127 aa5.63□□□□□ -1.51
PSEN1-204ENST00000394164 Q8N1X5 172 aa5.62□□□□□ -1.51
PSEN1-204ENST00000394164 KRTAP1-4P0C5Y4 121 aa5.61□□□□□ -1.51
PSEN1-204ENST00000394164 SACSQ9NZJ4 4579 aa5.61□□□□□ -1.51
PSEN1-204ENST00000394164 TYMSOSQ8TAI1 123 aa5.61□□□□□ -1.51
PSEN1-204ENST00000394164 KRTAP3-3Q9BYR6 98 aa5.61□□□□□ -1.51
PSEN1-204ENST00000394164 KRTAP3-2Q9BYR7 98 aa5.61□□□□□ -1.51
PSEN1-204ENST00000394164 ROMO1P60602 79 aa5.58□□□□□ -1.52
PSEN1-204ENST00000394164 DYNC1H1Q14204 4646 aaKnown RBP5.57□□□□□ -1.52
PSEN1-204ENST00000394164 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
PSEN1-204ENST00000394164 KMT2CQ8NEZ4 4911 aaKnown RBP5.56□□□□□ -1.52
PSEN1-204ENST00000394164 LINC00304Q8N9R0 145 aa5.56□□□□□ -1.52
PSEN1-204ENST00000394164 H0YAA0 97 aa5.55□□□□□ -1.52
PSEN1-204ENST00000394164 A8MUU9 505 aa5.53□□□□□ -1.52
PSEN1-204ENST00000394164 C9orf92A6NGG3 77 aa5.53□□□□□ -1.52
PSEN1-204ENST00000394164 KRTAP16-1A8MUX0 517 aa5.5□□□□□ -1.53
PSEN1-204ENST00000394164 DMBT1Q9UGM3 2413 aaPredicted RBP5.48□□□□□ -1.53
PSEN1-204ENST00000394164 P0C880 135 aa5.48□□□□□ -1.53
PSEN1-204ENST00000394164 APOBP04114 4563 aaKnown RBP5.46□□□□□ -1.54
PSEN1-204ENST00000394164 RYR2Q92736 4967 aa5.46□□□□□ -1.54
PSEN1-204ENST00000394164 A0A1B0GU33 70 aa5.45□□□□□ -1.54
PSEN1-204ENST00000394164 LRP1Q07954 4544 aaKnown RBP5.43□□□□□ -1.54
PSEN1-204ENST00000394164 A0A1B0GVY2 172 aa5.4□□□□□ -1.55
PSEN1-204ENST00000394164 SPINT4Q6UDR6 99 aa5.4□□□□□ -1.55
PSEN1-204ENST00000394164 H1FX-AS1Q4G0G2 97 aa5.39□□□□□ -1.55
PSEN1-204ENST00000394164 MYCBP2O75592 4640 aa5.39□□□□□ -1.55
PSEN1-204ENST00000394164 KRTAP21-3Q3LHN1 58 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms