RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 CDK2AP2O75956 126 aa4.33□□□□□ -1.72
SMAD1-202ENST00000394092 MMP24-AS1A0A0U1RRL7 71 aa4.32□□□□□ -1.72
SMAD1-202ENST00000394092 hDV103S1A0JD37 113 aa4.32□□□□□ -1.72
SMAD1-202ENST00000394092 Q96NJ1 140 aa4.32□□□□□ -1.72
SMAD1-202ENST00000394092 DNAH8Q96JB1 4490 aa4.31□□□□□ -1.72
SMAD1-202ENST00000394092 H0Y9P7 68 aa4.31□□□□□ -1.72
SMAD1-202ENST00000394092 CD164Q04900 197 aa4.31□□□□□ -1.72
SMAD1-202ENST00000394092 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
SMAD1-202ENST00000394092 TP53AIP1Q9HCN2 124 aa4.31□□□□□ -1.72
SMAD1-202ENST00000394092 SRRM2Q9UQ35 2752 aaKnown RBP4.31□□□□□ -1.72
SMAD1-202ENST00000394092 A0A1B0GVX0 72 aa4.3□□□□□ -1.72
SMAD1-202ENST00000394092 HRCT1Q6UXD1 115 aa4.3□□□□□ -1.72
SMAD1-202ENST00000394092 KRTAP9-3Q9BYQ3 159 aa4.3□□□□□ -1.72
SMAD1-202ENST00000394092 FRAS1Q86XX4 4008 aa4.3□□□□□ -1.72
SMAD1-202ENST00000394092 TRAV22A0A0B4J277 110 aa4.29□□□□□ -1.72
SMAD1-202ENST00000394092 Q5XG85 94 aa4.29□□□□□ -1.72
SMAD1-202ENST00000394092 SSBP3-AS1Q7Z2R9 100 aa4.29□□□□□ -1.72
SMAD1-202ENST00000394092 CIRBP-AS1Q8TBR5 109 aa4.29□□□□□ -1.72
SMAD1-202ENST00000394092 LINC00208Q96KT6 92 aa4.29□□□□□ -1.72
SMAD1-202ENST00000394092 C8orf17Q9NRJ1 99 aa4.29□□□□□ -1.72
SMAD1-202ENST00000394092 TGP01266 2768 aa4.29□□□□□ -1.72
SMAD1-202ENST00000394092 KRTAP10-2P60368 255 aa4.28□□□□□ -1.72
SMAD1-202ENST00000394092 ASB16-AS1Q495Z4 193 aa4.28□□□□□ -1.72
SMAD1-202ENST00000394092 Q6ZSA8 131 aa4.28□□□□□ -1.72
SMAD1-202ENST00000394092 SPANXA2-OT1Q8N9U9 137 aa4.28□□□□□ -1.72
SMAD1-202ENST00000394092 CYP4F30PQ9H0H9 118 aa4.28□□□□□ -1.72
SMAD1-202ENST00000394092 DNAH5Q8TE73 4624 aa4.28□□□□□ -1.72
SMAD1-202ENST00000394092 ANAPC11Q9NYG5 84 aa4.27□□□□□ -1.73
SMAD1-202ENST00000394092 FBN3Q75N90 2809 aa4.27□□□□□ -1.73
SMAD1-202ENST00000394092 DNAH11Q96DT5 4516 aa4.26□□□□□ -1.73
SMAD1-202ENST00000394092 IGHV6-1A0A0B4J1U7 121 aa4.26□□□□□ -1.73
SMAD1-202ENST00000394092 FAM229BQ4G0N7 80 aa4.26□□□□□ -1.73
SMAD1-202ENST00000394092 C1orf64Q8NEQ6 169 aa4.26□□□□□ -1.73
SMAD1-202ENST00000394092 MRPL34Q9BQ48 92 aaKnown RBP4.26□□□□□ -1.73
SMAD1-202ENST00000394092 C4orf26Q17RF5 130 aa4.25□□□□□ -1.73
SMAD1-202ENST00000394092 FP248Q71RG6 208 aaPredicted RBP4.25□□□□□ -1.73
SMAD1-202ENST00000394092 C8orf87E5RJ46 101 aa4.24□□□□□ -1.73
SMAD1-202ENST00000394092 NDUFS5O43920 106 aa4.24□□□□□ -1.73
SMAD1-202ENST00000394092 KRTAP10-1P60331 282 aa4.24□□□□□ -1.73
SMAD1-202ENST00000394092 SPINK6Q6UWN8 80 aa4.22□□□□□ -1.73
SMAD1-202ENST00000394092 LIMD2Q9BT23 127 aa4.22□□□□□ -1.73
SMAD1-202ENST00000394092 PRR4Q16378 134 aa4.2□□□□□ -1.74
SMAD1-202ENST00000394092 PKD1P98161 4303 aa4.2□□□□□ -1.74
SMAD1-202ENST00000394092 FAT2Q9NYQ8 4349 aa4.2□□□□□ -1.74
SMAD1-202ENST00000394092 A0A087X002 238 aa4.19□□□□□ -1.74
SMAD1-202ENST00000394092 LOC101927531A0A1B0GV80 90 aa4.19□□□□□ -1.74
SMAD1-202ENST00000394092 LINC00336Q6ZUF6 198 aa4.19□□□□□ -1.74
SMAD1-202ENST00000394092 MPLKIPQ8TAP9 179 aa4.19□□□□□ -1.74
SMAD1-202ENST00000394092 V9GYY9 64 aa4.19□□□□□ -1.74
SMAD1-202ENST00000394092 IGLV7-46A0A075B6I9 117 aa4.19□□□□□ -1.74
SMAD1-202ENST00000394092 HYDINQ4G0P3 5121 aa4.18□□□□□ -1.74
SMAD1-202ENST00000394092 Q1T7F1 81 aa4.18□□□□□ -1.74
SMAD1-202ENST00000394092 KRTAP13-2Q52LG2 175 aa4.18□□□□□ -1.74
SMAD1-202ENST00000394092 LINC00313P59037 77 aa4.17□□□□□ -1.74
SMAD1-202ENST00000394092 KRTAP1-4P0C5Y4 121 aa4.16□□□□□ -1.74
SMAD1-202ENST00000394092 PCOTHQ58A44 107 aa4.16□□□□□ -1.74
SMAD1-202ENST00000394092 C1orf195Q5TG92 126 aa4.16□□□□□ -1.74
SMAD1-202ENST00000394092 NOTCH2NLQ7Z3S9 236 aa4.16□□□□□ -1.74
SMAD1-202ENST00000394092 TYMSOSQ8TAI1 123 aa4.16□□□□□ -1.74
SMAD1-202ENST00000394092 SPINK1P00995 79 aa4.15□□□□□ -1.75
SMAD1-202ENST00000394092 PLA2G1BP04054 148 aaKnown RBP4.15□□□□□ -1.75
SMAD1-202ENST00000394092 RPS29P62273 56 aaKnown RBP4.14□□□□□ -1.75
SMAD1-202ENST00000394092 VPS13BQ7Z7G8 4022 aa4.14□□□□□ -1.75
SMAD1-202ENST00000394092 COA5Q86WW8 74 aa4.13□□□□□ -1.75
SMAD1-202ENST00000394092 Q8N9P0 234 aaPredicted RBP4.13□□□□□ -1.75
SMAD1-202ENST00000394092 PRO0628Q9UI54 55 aa4.13□□□□□ -1.75
SMAD1-202ENST00000394092 LRP1BQ9NZR2 4599 aa4.13□□□□□ -1.75
SMAD1-202ENST00000394092 KRTAP13-3Q3SY46 172 aa4.13□□□□□ -1.75
SMAD1-202ENST00000394092 SACSQ9NZJ4 4579 aa4.12□□□□□ -1.75
SMAD1-202ENST00000394092 SPAG11AQ6PDA7 123 aa4.12□□□□□ -1.75
SMAD1-202ENST00000394092 Q5W150 140 aa4.1□□□□□ -1.75
SMAD1-202ENST00000394092 LINC00304Q8N9R0 145 aa4.1□□□□□ -1.75
SMAD1-202ENST00000394092 BRK1Q8WUW1 75 aa4.1□□□□□ -1.75
SMAD1-202ENST00000394092 A0A1B0GVY2 172 aa4.09□□□□□ -1.76
SMAD1-202ENST00000394092 KRTAP16-1A8MUX0 517 aa4.09□□□□□ -1.76
SMAD1-202ENST00000394092 PSPHP1O15172 72 aa4.08□□□□□ -1.76
SMAD1-202ENST00000394092 PKHD1P08F94 4074 aa4.08□□□□□ -1.76
SMAD1-202ENST00000394092 IGKV2-30P06310 120 aa4.07□□□□□ -1.76
SMAD1-202ENST00000394092 ACYP2P14621 99 aa4.07□□□□□ -1.76
SMAD1-202ENST00000394092 A8MUN3 132 aa4.06□□□□□ -1.76
SMAD1-202ENST00000394092 HRES1P13985 223 aa4.06□□□□□ -1.76
SMAD1-202ENST00000394092 PRR26Q8N8Z3 221 aa4.06□□□□□ -1.76
SMAD1-202ENST00000394092 DYNC1H1Q14204 4646 aaKnown RBP4.05□□□□□ -1.76
SMAD1-202ENST00000394092 DMAC1Q96GE9 116 aa4.05□□□□□ -1.76
SMAD1-202ENST00000394092 PRR15LQ9BU68 103 aa4.05□□□□□ -1.76
SMAD1-202ENST00000394092 SMR3BP02814 79 aaPredicted RBP4.04□□□□□ -1.76
SMAD1-202ENST00000394092 Q5VV11 94 aa4.04□□□□□ -1.76
SMAD1-202ENST00000394092 LINC01558Q9Y6Z2 57 aa4.04□□□□□ -1.76
SMAD1-202ENST00000394092 Q75L30 129 aa4.03□□□□□ -1.76
SMAD1-202ENST00000394092 RETNLBQ9BQ08 111 aa4.03□□□□□ -1.76
SMAD1-202ENST00000394092 CHKB-CPT1BH3BT56 60 aa4.03□□□□□ -1.76
SMAD1-202ENST00000394092 APOBP04114 4563 aaKnown RBP4.02□□□□□ -1.77
SMAD1-202ENST00000394092 IGKV2D-30A0A075B6S6 120 aa4.01□□□□□ -1.77
SMAD1-202ENST00000394092 KRTAP10-4P60372 401 aaPredicted RBP4.01□□□□□ -1.77
SMAD1-202ENST00000394092 C7orf65Q6ZTY9 151 aa4.01□□□□□ -1.77
SMAD1-202ENST00000394092 RYR2Q92736 4967 aa4.01□□□□□ -1.77
SMAD1-202ENST00000394092 PKHD1L1Q86WI1 4243 aa4□□□□□ -1.77
SMAD1-202ENST00000394092 A6NED7 52 aa3.98□□□□□ -1.77
SMAD1-202ENST00000394092 C20orf166-AS1Q96NR2 134 aa3.97□□□□□ -1.77
SMAD1-202ENST00000394092 A8MUU9 505 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms