RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 PRR15LQ9BU68 103 aa14.03□□□□□ -0.16
RARA-204ENST00000394089 ZNF861PO60384 105 aa14.02□□□□□ -0.17
RARA-204ENST00000394089 NDUFS5O43920 106 aa14.01□□□□□ -0.17
RARA-204ENST00000394089 CASC2Q6XLA1 102 aa14□□□□□ -0.17
RARA-204ENST00000394089 LCA10Q71F78 164 aa14□□□□□ -0.17
RARA-204ENST00000394089 A0A087WSZ3 146 aa13.99□□□□□ -0.17
RARA-204ENST00000394089 IGLV7-46A0A075B6I9 117 aa13.98□□□□□ -0.17
RARA-204ENST00000394089 A6NN06 94 aa13.98□□□□□ -0.17
RARA-204ENST00000394089 DEFB116Q30KQ4 102 aa13.97□□□□□ -0.17
RARA-204ENST00000394089 IGLV7-43P04211 117 aa13.97□□□□□ -0.17
RARA-204ENST00000394089 ZNF706Q9Y5V0 76 aaPredicted RBP13.97□□□□□ -0.17
RARA-204ENST00000394089 A8MWP4 228 aa13.95□□□□□ -0.18
RARA-204ENST00000394089 LINC00483Q53H64 154 aa13.95□□□□□ -0.18
RARA-204ENST00000394089 COA5Q86WW8 74 aa13.95□□□□□ -0.18
RARA-204ENST00000394089 CDC42SE1Q9NRR8 79 aa13.95□□□□□ -0.18
RARA-204ENST00000394089 RYR2Q92736 4967 aa13.94□□□□□ -0.18
RARA-204ENST00000394089 RBM12B-AS1Q9P1G2 102 aa13.94□□□□□ -0.18
RARA-204ENST00000394089 RPL37AP61513 92 aaKnown RBP13.92□□□□□ -0.18
RARA-204ENST00000394089 A0A1B0GVY2 172 aa13.91□□□□□ -0.18
RARA-204ENST00000394089 A0A0G2JQZ4 141 aa13.91□□□□□ -0.18
RARA-204ENST00000394089 LINC00472Q9H8W2 130 aa13.91□□□□□ -0.18
RARA-204ENST00000394089 LINC01558Q9Y6Z2 57 aa13.89□□□□□ -0.19
RARA-204ENST00000394089 A6NED7 52 aa13.88□□□□□ -0.19
RARA-204ENST00000394089 SRRM2Q9UQ35 2752 aaKnown RBP13.86□□□□□ -0.19
RARA-204ENST00000394089 SPTSSBQ8NFR3 76 aa13.86□□□□□ -0.19
RARA-204ENST00000394089 LRP1BQ9NZR2 4599 aa13.83□□□□□ -0.19
RARA-204ENST00000394089 MMP24-AS1A0A0U1RRL7 71 aa13.82□□□□□ -0.2
RARA-204ENST00000394089 ASB16-AS1Q495Z4 193 aa13.8□□□□□ -0.2
RARA-204ENST00000394089 KMT2CQ8NEZ4 4911 aaKnown RBP13.8□□□□□ -0.2
RARA-204ENST00000394089 C7orf65Q6ZTY9 151 aa13.79□□□□□ -0.2
RARA-204ENST00000394089 IGLV9-49A0A0B4J1Y8 123 aa13.78□□□□□ -0.2
RARA-204ENST00000394089 DYNC1H1Q14204 4646 aaKnown RBP13.77□□□□□ -0.2
RARA-204ENST00000394089 TP53AIP1Q9HCN2 124 aa13.77□□□□□ -0.21
RARA-204ENST00000394089 PKHD1P08F94 4074 aa13.75□□□□□ -0.21
RARA-204ENST00000394089 ANAPC11Q9NYG5 84 aa13.74□□□□□ -0.21
RARA-204ENST00000394089 MOBPQ13875 183 aa13.73□□□□□ -0.21
RARA-204ENST00000394089 SPAG11AQ6PDA7 123 aa13.63□□□□□ -0.23
RARA-204ENST00000394089 VPS13BQ7Z7G8 4022 aa13.61□□□□□ -0.23
RARA-204ENST00000394089 PCOTHQ58A44 107 aa13.61□□□□□ -0.23
RARA-204ENST00000394089 APOBP04114 4563 aaKnown RBP13.6□□□□□ -0.23
RARA-204ENST00000394089 HRES1P13985 223 aa13.59□□□□□ -0.23
RARA-204ENST00000394089 SSBP3-AS1Q7Z2R9 100 aa13.59□□□□□ -0.23
RARA-204ENST00000394089 Q96NJ1 140 aa13.59□□□□□ -0.23
RARA-204ENST00000394089 SPINK7P58062 85 aa13.59□□□□□ -0.23
RARA-204ENST00000394089 KRTAP1-4P0C5Y4 121 aa13.56□□□□□ -0.24
RARA-204ENST00000394089 C8orf17Q9NRJ1 99 aa13.55□□□□□ -0.24
RARA-204ENST00000394089 SMR3BP02814 79 aaPredicted RBP13.54□□□□□ -0.24
RARA-204ENST00000394089 SPINK6Q6UWN8 80 aa13.54□□□□□ -0.24
RARA-204ENST00000394089 A0A087X002 238 aa13.53□□□□□ -0.24
RARA-204ENST00000394089 RYR3Q15413 4870 aa13.52□□□□□ -0.25
RARA-204ENST00000394089 KRTAP13-2Q52LG2 175 aa13.51□□□□□ -0.25
RARA-204ENST00000394089 KRTAP10-4P60372 401 aaPredicted RBP13.46□□□□□ -0.25
RARA-204ENST00000394089 A0A1B0GVX0 72 aa13.44□□□□□ -0.26
RARA-204ENST00000394089 PLA2G1BP04054 148 aaKnown RBP13.44□□□□□ -0.26
RARA-204ENST00000394089 MRPL34Q9BQ48 92 aaKnown RBP13.42□□□□□ -0.26
RARA-204ENST00000394089 FAT1Q14517 4588 aa13.38□□□□□ -0.27
RARA-204ENST00000394089 C8orf87E5RJ46 101 aa13.37□□□□□ -0.27
RARA-204ENST00000394089 LINC00313P59037 77 aa13.35□□□□□ -0.27
RARA-204ENST00000394089 CDK2AP2O75956 126 aa13.34□□□□□ -0.27
RARA-204ENST00000394089 TYMSOSQ8TAI1 123 aa13.34□□□□□ -0.27
RARA-204ENST00000394089 KRTAP13-3Q3SY46 172 aa13.33□□□□□ -0.28
RARA-204ENST00000394089 IGHV6-1A0A0B4J1U7 121 aa13.3□□□□□ -0.28
RARA-204ENST00000394089 PRR26Q8N8Z3 221 aa13.29□□□□□ -0.28
RARA-204ENST00000394089 FAM229AH3BQW9 127 aa13.29□□□□□ -0.28
RARA-204ENST00000394089 ACYP2P14621 99 aa13.28□□□□□ -0.28
RARA-204ENST00000394089 C4orf48Q5BLP8 95 aa13.24□□□□□ -0.29
RARA-204ENST00000394089 PKHD1L1Q86WI1 4243 aa13.23□□□□□ -0.29
RARA-204ENST00000394089 SPATA8Q6RVD6 105 aa13.22□□□□□ -0.29
RARA-204ENST00000394089 SPINK1P00995 79 aa13.22□□□□□ -0.29
RARA-204ENST00000394089 DMAC1Q96GE9 116 aa13.22□□□□□ -0.29
RARA-204ENST00000394089 HSPG2P98160 4391 aa13.21□□□□□ -0.3
RARA-204ENST00000394089 NOTCH2NLQ7Z3S9 236 aa13.19□□□□□ -0.3
RARA-204ENST00000394089 RYR1P21817 5038 aa13.19□□□□□ -0.3
RARA-204ENST00000394089 LINC00304Q8N9R0 145 aa13.18□□□□□ -0.3
RARA-204ENST00000394089 PRAC1Q96KF2 57 aa13.18□□□□□ -0.3
RARA-204ENST00000394089 Q5VSD8 79 aa13.17□□□□□ -0.3
RARA-204ENST00000394089 Q5W150 140 aa13.17□□□□□ -0.3
RARA-204ENST00000394089 RPS29P62273 56 aaKnown RBP13.16□□□□□ -0.3
RARA-204ENST00000394089 LINC01554Q52M75 96 aa13.15□□□□□ -0.3
RARA-204ENST00000394089 A0A1B0GU69 56 aa13.08□□□□□ -0.31
RARA-204ENST00000394089 ADM2Q7Z4H4 148 aa13.08□□□□□ -0.31
RARA-204ENST00000394089 KRTAP17-1Q9BYP8 105 aa13.02□□□□□ -0.33
RARA-204ENST00000394089 EPPK1P58107 5090 aaKnown RBP13.02□□□□□ -0.33
RARA-204ENST00000394089 UQCR11O14957 56 aa13□□□□□ -0.33
RARA-204ENST00000394089 MIR22HGQ0VDD5 57 aa13□□□□□ -0.33
RARA-204ENST00000394089 Q8N1X5 172 aa12.99□□□□□ -0.33
RARA-204ENST00000394089 KIAA1109Q2LD37 5005 aa12.98□□□□□ -0.33
RARA-204ENST00000394089 KRTAP10-8P60410 259 aa12.95□□□□□ -0.34
RARA-204ENST00000394089 IGKV2-30P06310 120 aa12.93□□□□□ -0.34
RARA-204ENST00000394089 RETNLBQ9BQ08 111 aa12.88□□□□□ -0.35
RARA-204ENST00000394089 TNXBP22105 4242 aa12.86□□□□□ -0.35
RARA-204ENST00000394089 KRTAP16-1A8MUX0 517 aa12.84□□□□□ -0.35
RARA-204ENST00000394089 BIRC6Q9NR09 4857 aa12.84□□□□□ -0.35
RARA-204ENST00000394089 FAT3Q8TDW7 4589 aa12.84□□□□□ -0.35
RARA-204ENST00000394089 LRP1Q07954 4544 aaKnown RBP12.84□□□□□ -0.35
RARA-204ENST00000394089 CSAG1Q6PB30 78 aa12.77□□□□□ -0.37
RARA-204ENST00000394089 H3BS24 57 aa12.74□□□□□ -0.37
RARA-204ENST00000394089 FLG2Q5D862 2391 aaPredicted RBP12.73□□□□□ -0.37
RARA-204ENST00000394089 MT1HL1P0DM35 61 aa12.71□□□□□ -0.37
RARA-204ENST00000394089 IGKV2D-30A0A075B6S6 120 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms