RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 PRR15LQ9BU68 103 aa14.03□□□□□ -0.16
RARA-204ENST00000394089 ZNF861PO60384 105 aa14.02□□□□□ -0.17
RARA-204ENST00000394089 NDUFS5O43920 106 aa14.01□□□□□ -0.17
RARA-204ENST00000394089 CASC2Q6XLA1 102 aa14□□□□□ -0.17
RARA-204ENST00000394089 LCA10Q71F78 164 aa14□□□□□ -0.17
RARA-204ENST00000394089 A0A087WSZ3 146 aa13.99□□□□□ -0.17
RARA-204ENST00000394089 IGLV7-46A0A075B6I9 117 aa13.98□□□□□ -0.17
RARA-204ENST00000394089 A6NN06 94 aa13.98□□□□□ -0.17
RARA-204ENST00000394089 DEFB116Q30KQ4 102 aa13.97□□□□□ -0.17
RARA-204ENST00000394089 IGLV7-43P04211 117 aa13.97□□□□□ -0.17
RARA-204ENST00000394089 ZNF706Q9Y5V0 76 aaPredicted RBP13.97□□□□□ -0.17
RARA-204ENST00000394089 A8MWP4 228 aa13.95□□□□□ -0.18
RARA-204ENST00000394089 LINC00483Q53H64 154 aa13.95□□□□□ -0.18
RARA-204ENST00000394089 COA5Q86WW8 74 aa13.95□□□□□ -0.18
RARA-204ENST00000394089 CDC42SE1Q9NRR8 79 aa13.95□□□□□ -0.18
RARA-204ENST00000394089 RYR2Q92736 4967 aa13.94□□□□□ -0.18
RARA-204ENST00000394089 RBM12B-AS1Q9P1G2 102 aa13.94□□□□□ -0.18
RARA-204ENST00000394089 RPL37AP61513 92 aaKnown RBP13.92□□□□□ -0.18
RARA-204ENST00000394089 A0A1B0GVY2 172 aa13.91□□□□□ -0.18
RARA-204ENST00000394089 A0A0G2JQZ4 141 aa13.91□□□□□ -0.18
RARA-204ENST00000394089 LINC00472Q9H8W2 130 aa13.91□□□□□ -0.18
RARA-204ENST00000394089 LINC01558Q9Y6Z2 57 aa13.89□□□□□ -0.19
RARA-204ENST00000394089 A6NED7 52 aa13.88□□□□□ -0.19
RARA-204ENST00000394089 SRRM2Q9UQ35 2752 aaKnown RBP13.86□□□□□ -0.19
RARA-204ENST00000394089 SPTSSBQ8NFR3 76 aa13.86□□□□□ -0.19
RARA-204ENST00000394089 LRP1BQ9NZR2 4599 aa13.83□□□□□ -0.19
RARA-204ENST00000394089 MMP24-AS1A0A0U1RRL7 71 aa13.82□□□□□ -0.2
RARA-204ENST00000394089 ASB16-AS1Q495Z4 193 aa13.8□□□□□ -0.2
RARA-204ENST00000394089 KMT2CQ8NEZ4 4911 aaKnown RBP13.8□□□□□ -0.2
RARA-204ENST00000394089 C7orf65Q6ZTY9 151 aa13.79□□□□□ -0.2
RARA-204ENST00000394089 IGLV9-49A0A0B4J1Y8 123 aa13.78□□□□□ -0.2
RARA-204ENST00000394089 DYNC1H1Q14204 4646 aaKnown RBP13.77□□□□□ -0.2
RARA-204ENST00000394089 TP53AIP1Q9HCN2 124 aa13.77□□□□□ -0.21
RARA-204ENST00000394089 PKHD1P08F94 4074 aa13.75□□□□□ -0.21
RARA-204ENST00000394089 ANAPC11Q9NYG5 84 aa13.74□□□□□ -0.21
RARA-204ENST00000394089 MOBPQ13875 183 aa13.73□□□□□ -0.21
RARA-204ENST00000394089 SPAG11AQ6PDA7 123 aa13.63□□□□□ -0.23
RARA-204ENST00000394089 VPS13BQ7Z7G8 4022 aa13.61□□□□□ -0.23
RARA-204ENST00000394089 PCOTHQ58A44 107 aa13.61□□□□□ -0.23
RARA-204ENST00000394089 APOBP04114 4563 aaKnown RBP13.6□□□□□ -0.23
RARA-204ENST00000394089 HRES1P13985 223 aa13.59□□□□□ -0.23
RARA-204ENST00000394089 SSBP3-AS1Q7Z2R9 100 aa13.59□□□□□ -0.23
RARA-204ENST00000394089 Q96NJ1 140 aa13.59□□□□□ -0.23
RARA-204ENST00000394089 SPINK7P58062 85 aa13.59□□□□□ -0.23
RARA-204ENST00000394089 KRTAP1-4P0C5Y4 121 aa13.56□□□□□ -0.24
RARA-204ENST00000394089 C8orf17Q9NRJ1 99 aa13.55□□□□□ -0.24
RARA-204ENST00000394089 SMR3BP02814 79 aaPredicted RBP13.54□□□□□ -0.24
RARA-204ENST00000394089 SPINK6Q6UWN8 80 aa13.54□□□□□ -0.24
RARA-204ENST00000394089 A0A087X002 238 aa13.53□□□□□ -0.24
RARA-204ENST00000394089 RYR3Q15413 4870 aa13.52□□□□□ -0.25
RARA-204ENST00000394089 KRTAP13-2Q52LG2 175 aa13.51□□□□□ -0.25
RARA-204ENST00000394089 KRTAP10-4P60372 401 aaPredicted RBP13.46□□□□□ -0.25
RARA-204ENST00000394089 A0A1B0GVX0 72 aa13.44□□□□□ -0.26
RARA-204ENST00000394089 PLA2G1BP04054 148 aaKnown RBP13.44□□□□□ -0.26
RARA-204ENST00000394089 MRPL34Q9BQ48 92 aaKnown RBP13.42□□□□□ -0.26
RARA-204ENST00000394089 FAT1Q14517 4588 aa13.38□□□□□ -0.27
RARA-204ENST00000394089 C8orf87E5RJ46 101 aa13.37□□□□□ -0.27
RARA-204ENST00000394089 LINC00313P59037 77 aa13.35□□□□□ -0.27
RARA-204ENST00000394089 CDK2AP2O75956 126 aa13.34□□□□□ -0.27
RARA-204ENST00000394089 TYMSOSQ8TAI1 123 aa13.34□□□□□ -0.27
RARA-204ENST00000394089 KRTAP13-3Q3SY46 172 aa13.33□□□□□ -0.28
RARA-204ENST00000394089 IGHV6-1A0A0B4J1U7 121 aa13.3□□□□□ -0.28
RARA-204ENST00000394089 PRR26Q8N8Z3 221 aa13.29□□□□□ -0.28
RARA-204ENST00000394089 FAM229AH3BQW9 127 aa13.29□□□□□ -0.28
RARA-204ENST00000394089 ACYP2P14621 99 aa13.28□□□□□ -0.28
RARA-204ENST00000394089 C4orf48Q5BLP8 95 aa13.24□□□□□ -0.29
RARA-204ENST00000394089 PKHD1L1Q86WI1 4243 aa13.23□□□□□ -0.29
RARA-204ENST00000394089 SPATA8Q6RVD6 105 aa13.22□□□□□ -0.29
RARA-204ENST00000394089 SPINK1P00995 79 aa13.22□□□□□ -0.29
RARA-204ENST00000394089 DMAC1Q96GE9 116 aa13.22□□□□□ -0.29
RARA-204ENST00000394089 HSPG2P98160 4391 aa13.21□□□□□ -0.3
RARA-204ENST00000394089 NOTCH2NLQ7Z3S9 236 aa13.19□□□□□ -0.3
RARA-204ENST00000394089 RYR1P21817 5038 aa13.19□□□□□ -0.3
RARA-204ENST00000394089 LINC00304Q8N9R0 145 aa13.18□□□□□ -0.3
RARA-204ENST00000394089 PRAC1Q96KF2 57 aa13.18□□□□□ -0.3
RARA-204ENST00000394089 Q5VSD8 79 aa13.17□□□□□ -0.3
RARA-204ENST00000394089 Q5W150 140 aa13.17□□□□□ -0.3
RARA-204ENST00000394089 RPS29P62273 56 aaKnown RBP13.16□□□□□ -0.3
RARA-204ENST00000394089 LINC01554Q52M75 96 aa13.15□□□□□ -0.3
RARA-204ENST00000394089 A0A1B0GU69 56 aa13.08□□□□□ -0.31
RARA-204ENST00000394089 ADM2Q7Z4H4 148 aa13.08□□□□□ -0.31
RARA-204ENST00000394089 KRTAP17-1Q9BYP8 105 aa13.02□□□□□ -0.33
RARA-204ENST00000394089 EPPK1P58107 5090 aaKnown RBP13.02□□□□□ -0.33
RARA-204ENST00000394089 UQCR11O14957 56 aa13□□□□□ -0.33
RARA-204ENST00000394089 MIR22HGQ0VDD5 57 aa13□□□□□ -0.33
RARA-204ENST00000394089 Q8N1X5 172 aa12.99□□□□□ -0.33
RARA-204ENST00000394089 KIAA1109Q2LD37 5005 aa12.98□□□□□ -0.33
RARA-204ENST00000394089 KRTAP10-8P60410 259 aa12.95□□□□□ -0.34
RARA-204ENST00000394089 IGKV2-30P06310 120 aa12.93□□□□□ -0.34
RARA-204ENST00000394089 RETNLBQ9BQ08 111 aa12.88□□□□□ -0.35
RARA-204ENST00000394089 TNXBP22105 4242 aa12.86□□□□□ -0.35
RARA-204ENST00000394089 KRTAP16-1A8MUX0 517 aa12.84□□□□□ -0.35
RARA-204ENST00000394089 BIRC6Q9NR09 4857 aa12.84□□□□□ -0.35
RARA-204ENST00000394089 FAT3Q8TDW7 4589 aa12.84□□□□□ -0.35
RARA-204ENST00000394089 LRP1Q07954 4544 aaKnown RBP12.84□□□□□ -0.35
RARA-204ENST00000394089 CSAG1Q6PB30 78 aa12.77□□□□□ -0.37
RARA-204ENST00000394089 H3BS24 57 aa12.74□□□□□ -0.37
RARA-204ENST00000394089 FLG2Q5D862 2391 aaPredicted RBP12.73□□□□□ -0.37
RARA-204ENST00000394089 MT1HL1P0DM35 61 aa12.71□□□□□ -0.37
RARA-204ENST00000394089 IGKV2D-30A0A075B6S6 120 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms