RNA–Protein interactions for RNA: ENST00000393346.7

PICALM-202, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PICALM, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-202ENST00000393346 C8orf17Q9NRJ1 99 aa14.09□□□□□ -0.15
PICALM-202ENST00000393346 PSORS1C2Q9UIG4 136 aa14.09□□□□□ -0.15
PICALM-202ENST00000393346 RYR2Q92736 4967 aa14.09□□□□□ -0.15
PICALM-202ENST00000393346 KRTAP10-1P60331 282 aa14.07□□□□□ -0.16
PICALM-202ENST00000393346 CIRBP-AS1Q8TBR5 109 aa14.05□□□□□ -0.16
PICALM-202ENST00000393346 A0A1B0GVX0 72 aa14.04□□□□□ -0.16
PICALM-202ENST00000393346 IGLV7-46A0A075B6I9 117 aa14.03□□□□□ -0.16
PICALM-202ENST00000393346 ZNF861PO60384 105 aa14.03□□□□□ -0.16
PICALM-202ENST00000393346 IGHV6-1A0A0B4J1U7 121 aa14.01□□□□□ -0.17
PICALM-202ENST00000393346 Q6ZSA8 131 aa14□□□□□ -0.17
PICALM-202ENST00000393346 A8MUN3 132 aa13.99□□□□□ -0.17
PICALM-202ENST00000393346 CDK2AP2O75956 126 aa13.99□□□□□ -0.17
PICALM-202ENST00000393346 ANAPC11Q9NYG5 84 aa13.99□□□□□ -0.17
PICALM-202ENST00000393346 Q8N9P0 234 aaPredicted RBP13.98□□□□□ -0.17
PICALM-202ENST00000393346 LRP1BQ9NZR2 4599 aa13.97□□□□□ -0.17
PICALM-202ENST00000393346 C1orf195Q5TG92 126 aa13.96□□□□□ -0.18
PICALM-202ENST00000393346 PCOTHQ58A44 107 aa13.95□□□□□ -0.18
PICALM-202ENST00000393346 MRPL34Q9BQ48 92 aaKnown RBP13.95□□□□□ -0.18
PICALM-202ENST00000393346 LIMD2Q9BT23 127 aa13.95□□□□□ -0.18
PICALM-202ENST00000393346 NDUFS5O43920 106 aa13.94□□□□□ -0.18
PICALM-202ENST00000393346 COA5Q86WW8 74 aa13.94□□□□□ -0.18
PICALM-202ENST00000393346 CD164Q04900 197 aa13.93□□□□□ -0.18
PICALM-202ENST00000393346 Q5VV11 94 aa13.92□□□□□ -0.18
PICALM-202ENST00000393346 A0A087X002 238 aa13.88□□□□□ -0.19
PICALM-202ENST00000393346 NOTCH2NLQ7Z3S9 236 aa13.88□□□□□ -0.19
PICALM-202ENST00000393346 VPS13BQ7Z7G8 4022 aa13.87□□□□□ -0.19
PICALM-202ENST00000393346 A0A1B0GVY2 172 aa13.86□□□□□ -0.19
PICALM-202ENST00000393346 RYR3Q15413 4870 aa13.85□□□□□ -0.19
PICALM-202ENST00000393346 DYNC1H1Q14204 4646 aaKnown RBP13.85□□□□□ -0.19
PICALM-202ENST00000393346 IGLV7-43P04211 117 aa13.84□□□□□ -0.19
PICALM-202ENST00000393346 PRR15LQ9BU68 103 aa13.82□□□□□ -0.2
PICALM-202ENST00000393346 CHKB-CPT1BH3BT56 60 aa13.78□□□□□ -0.2
PICALM-202ENST00000393346 SPINK6Q6UWN8 80 aa13.78□□□□□ -0.2
PICALM-202ENST00000393346 LOC101927531A0A1B0GV80 90 aa13.76□□□□□ -0.21
PICALM-202ENST00000393346 Q75L30 129 aa13.73□□□□□ -0.21
PICALM-202ENST00000393346 SSBP3-AS1Q7Z2R9 100 aa13.73□□□□□ -0.21
PICALM-202ENST00000393346 HRES1P13985 223 aa13.7□□□□□ -0.22
PICALM-202ENST00000393346 KRTAP13-3Q3SY46 172 aa13.7□□□□□ -0.22
PICALM-202ENST00000393346 APOBP04114 4563 aaKnown RBP13.7□□□□□ -0.22
PICALM-202ENST00000393346 Q5W150 140 aa13.7□□□□□ -0.22
PICALM-202ENST00000393346 A8MU10 97 aa13.69□□□□□ -0.22
PICALM-202ENST00000393346 LINC01558Q9Y6Z2 57 aa13.67□□□□□ -0.22
PICALM-202ENST00000393346 C8orf87E5RJ46 101 aa13.66□□□□□ -0.22
PICALM-202ENST00000393346 SPAG11AQ6PDA7 123 aa13.65□□□□□ -0.22
PICALM-202ENST00000393346 SMR3BP02814 79 aaPredicted RBP13.64□□□□□ -0.23
PICALM-202ENST00000393346 FAT1Q14517 4588 aa13.63□□□□□ -0.23
PICALM-202ENST00000393346 A6NED7 52 aa13.6□□□□□ -0.23
PICALM-202ENST00000393346 PMAIP1Q13794 54 aa13.6□□□□□ -0.23
PICALM-202ENST00000393346 LCA10Q71F78 164 aa13.57□□□□□ -0.24
PICALM-202ENST00000393346 LINC00313P59037 77 aa13.55□□□□□ -0.24
PICALM-202ENST00000393346 KRTAP13-2Q52LG2 175 aa13.51□□□□□ -0.25
PICALM-202ENST00000393346 ATP11AUNQ6ZP68 121 aa13.5□□□□□ -0.25
PICALM-202ENST00000393346 CDC42SE1Q9NRR8 79 aa13.49□□□□□ -0.25
PICALM-202ENST00000393346 FAM229AH3BQW9 127 aa13.48□□□□□ -0.25
PICALM-202ENST00000393346 ACYP2P14621 99 aa13.48□□□□□ -0.25
PICALM-202ENST00000393346 PRR26Q8N8Z3 221 aa13.46□□□□□ -0.25
PICALM-202ENST00000393346 SPTSSBQ8NFR3 76 aa13.45□□□□□ -0.26
PICALM-202ENST00000393346 KRTAP1-4P0C5Y4 121 aa13.45□□□□□ -0.26
PICALM-202ENST00000393346 DMAC1Q96GE9 116 aa13.42□□□□□ -0.26
PICALM-202ENST00000393346 PLA2G1BP04054 148 aaKnown RBP13.41□□□□□ -0.26
PICALM-202ENST00000393346 SPINK7P58062 85 aa13.39□□□□□ -0.27
PICALM-202ENST00000393346 HSPG2P98160 4391 aa13.38□□□□□ -0.27
PICALM-202ENST00000393346 IGKV2-30P06310 120 aa13.38□□□□□ -0.27
PICALM-202ENST00000393346 KRTAP10-4P60372 401 aaPredicted RBP13.38□□□□□ -0.27
PICALM-202ENST00000393346 RETNLBQ9BQ08 111 aa13.38□□□□□ -0.27
PICALM-202ENST00000393346 KRTAP16-1A8MUX0 517 aa13.37□□□□□ -0.27
PICALM-202ENST00000393346 EPPK1P58107 5090 aaKnown RBP13.35□□□□□ -0.27
PICALM-202ENST00000393346 A6NN06 94 aa13.29□□□□□ -0.28
PICALM-202ENST00000393346 RYR1P21817 5038 aa13.28□□□□□ -0.28
PICALM-202ENST00000393346 SEC61GP60059 68 aa13.28□□□□□ -0.28
PICALM-202ENST00000393346 KIAA1109Q2LD37 5005 aa13.28□□□□□ -0.28
PICALM-202ENST00000393346 KTN1-AS1Q86SY8 53 aa13.27□□□□□ -0.28
PICALM-202ENST00000393346 TYMSOSQ8TAI1 123 aa13.27□□□□□ -0.29
PICALM-202ENST00000393346 C4orf48Q5BLP8 95 aa13.21□□□□□ -0.29
PICALM-202ENST00000393346 Q5VSD8 79 aa13.21□□□□□ -0.3
PICALM-202ENST00000393346 IGKV2D-30A0A075B6S6 120 aa13.17□□□□□ -0.3
PICALM-202ENST00000393346 SPINK1P00995 79 aa13.17□□□□□ -0.3
PICALM-202ENST00000393346 A0A1B0GU69 56 aa13.14□□□□□ -0.31
PICALM-202ENST00000393346 PKHD1L1Q86WI1 4243 aa13.13□□□□□ -0.31
PICALM-202ENST00000393346 LRP1Q07954 4544 aaKnown RBP13.12□□□□□ -0.31
PICALM-202ENST00000393346 KRTAP17-1Q9BYP8 105 aa13.11□□□□□ -0.31
PICALM-202ENST00000393346 LINC00304Q8N9R0 145 aa13.08□□□□□ -0.31
PICALM-202ENST00000393346 FLG2Q5D862 2391 aaPredicted RBP13.07□□□□□ -0.32
PICALM-202ENST00000393346 C7orf65Q6ZTY9 151 aa13.06□□□□□ -0.32
PICALM-202ENST00000393346 RPS29P62273 56 aaKnown RBP13.01□□□□□ -0.33
PICALM-202ENST00000393346 SPATA8Q6RVD6 105 aa12.99□□□□□ -0.33
PICALM-202ENST00000393346 Q8N1X5 172 aa12.99□□□□□ -0.33
PICALM-202ENST00000393346 MYCBP2O75592 4640 aa12.98□□□□□ -0.33
PICALM-202ENST00000393346 TNXBP22105 4242 aa12.96□□□□□ -0.33
PICALM-202ENST00000393346 RBM12B-AS1Q9P1G2 102 aa12.94□□□□□ -0.34
PICALM-202ENST00000393346 UQCR11O14957 56 aa12.93□□□□□ -0.34
PICALM-202ENST00000393346 FAT3Q8TDW7 4589 aa12.91□□□□□ -0.34
PICALM-202ENST00000393346 MIR22HGQ0VDD5 57 aa12.89□□□□□ -0.35
PICALM-202ENST00000393346 DMBT1Q9UGM3 2413 aaPredicted RBP12.88□□□□□ -0.35
PICALM-202ENST00000393346 KRTAP10-8P60410 259 aa12.84□□□□□ -0.35
PICALM-202ENST00000393346 A8MUU9 505 aa12.76□□□□□ -0.37
PICALM-202ENST00000393346 C20orf166-AS1Q96NR2 134 aa12.76□□□□□ -0.37
PICALM-202ENST00000393346 KRTAP4-5Q9BYR2 181 aa12.76□□□□□ -0.37
PICALM-202ENST00000393346 C9orf92A6NGG3 77 aa12.72□□□□□ -0.37
PICALM-202ENST00000393346 MT1HL1P0DM35 61 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms