RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 PMAIP1Q13794 54 aa8.83□□□□□ -1
MKS1-202ENST00000393119 TRAV22A0A0B4J277 110 aa8.83□□□□□ -1
MKS1-202ENST00000393119 KRTAP13-2Q52LG2 175 aa8.83□□□□□ -1
MKS1-202ENST00000393119 EPPK1P58107 5090 aaKnown RBP8.82□□□□□ -1
MKS1-202ENST00000393119 KRTAP1-4P0C5Y4 121 aa8.81□□□□□ -1
MKS1-202ENST00000393119 HCG22E2RYF7 251 aa8.8□□□□□ -1
MKS1-202ENST00000393119 HSPG2P98160 4391 aa8.79□□□□□ -1
MKS1-202ENST00000393119 PSPHP1O15172 72 aa8.79□□□□□ -1
MKS1-202ENST00000393119 LINC00472Q9H8W2 130 aa8.77□□□□□ -1.01
MKS1-202ENST00000393119 NDUFB1O75438 58 aa8.76□□□□□ -1.01
MKS1-202ENST00000393119 Q96NJ1 140 aa8.76□□□□□ -1.01
MKS1-202ENST00000393119 KRTAP10-4P60372 401 aaPredicted RBP8.75□□□□□ -1.01
MKS1-202ENST00000393119 KIAA1109Q2LD37 5005 aa8.74□□□□□ -1.01
MKS1-202ENST00000393119 KRTAP29-1A8MX34 341 aaPredicted RBP8.74□□□□□ -1.01
MKS1-202ENST00000393119 PLA2G1BP04054 148 aaKnown RBP8.74□□□□□ -1.01
MKS1-202ENST00000393119 PRR4Q16378 134 aa8.73□□□□□ -1.01
MKS1-202ENST00000393119 KRTAP17-1Q9BYP8 105 aa8.73□□□□□ -1.01
MKS1-202ENST00000393119 Q5VV11 94 aa8.73□□□□□ -1.01
MKS1-202ENST00000393119 SPANXA2-OT1Q8N9U9 137 aa8.72□□□□□ -1.01
MKS1-202ENST00000393119 RYR1P21817 5038 aa8.72□□□□□ -1.01
MKS1-202ENST00000393119 A8MUN3 132 aa8.72□□□□□ -1.01
MKS1-202ENST00000393119 SPINK6Q6UWN8 80 aa8.7□□□□□ -1.02
MKS1-202ENST00000393119 WFDC13Q8IUB5 93 aa8.7□□□□□ -1.02
MKS1-202ENST00000393119 PRR26Q8N8Z3 221 aa8.7□□□□□ -1.02
MKS1-202ENST00000393119 LRP1Q07954 4544 aaKnown RBP8.7□□□□□ -1.02
MKS1-202ENST00000393119 A8MU10 97 aa8.68□□□□□ -1.02
MKS1-202ENST00000393119 H3BPC8 53 aa8.68□□□□□ -1.02
MKS1-202ENST00000393119 MP68P56378 58 aa8.67□□□□□ -1.02
MKS1-202ENST00000393119 Q8N9P0 234 aaPredicted RBP8.67□□□□□ -1.02
MKS1-202ENST00000393119 PKHD1L1Q86WI1 4243 aa8.67□□□□□ -1.02
MKS1-202ENST00000393119 SSBP3-AS1Q7Z2R9 100 aa8.66□□□□□ -1.02
MKS1-202ENST00000393119 NOTCH2NLQ7Z3S9 236 aa8.65□□□□□ -1.02
MKS1-202ENST00000393119 A8MWP4 228 aa8.64□□□□□ -1.03
MKS1-202ENST00000393119 LINC00208Q96KT6 92 aa8.64□□□□□ -1.03
MKS1-202ENST00000393119 TYMSOSQ8TAI1 123 aa8.63□□□□□ -1.03
MKS1-202ENST00000393119 LIMD2Q9BT23 127 aa8.63□□□□□ -1.03
MKS1-202ENST00000393119 CD164Q04900 197 aa8.62□□□□□ -1.03
MKS1-202ENST00000393119 IGHV6-1A0A0B4J1U7 121 aa8.61□□□□□ -1.03
MKS1-202ENST00000393119 H0Y9P7 68 aa8.61□□□□□ -1.03
MKS1-202ENST00000393119 LOC101927531A0A1B0GV80 90 aa8.59□□□□□ -1.03
MKS1-202ENST00000393119 CHKB-CPT1BH3BT56 60 aa8.59□□□□□ -1.03
MKS1-202ENST00000393119 MMP24-AS1A0A0U1RRL7 71 aa8.57□□□□□ -1.04
MKS1-202ENST00000393119 CASC2Q6XLA1 102 aa8.57□□□□□ -1.04
MKS1-202ENST00000393119 Q75L30 129 aa8.57□□□□□ -1.04
MKS1-202ENST00000393119 MYCBP2O75592 4640 aa8.57□□□□□ -1.04
MKS1-202ENST00000393119 Q5VSD8 79 aa8.56□□□□□ -1.04
MKS1-202ENST00000393119 LCA10Q71F78 164 aa8.55□□□□□ -1.04
MKS1-202ENST00000393119 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
MKS1-202ENST00000393119 A0A1B0GVX0 72 aa8.54□□□□□ -1.04
MKS1-202ENST00000393119 TNXBP22105 4242 aa8.53□□□□□ -1.04
MKS1-202ENST00000393119 IGLV7-46A0A075B6I9 117 aa8.53□□□□□ -1.04
MKS1-202ENST00000393119 KTN1-AS1Q86SY8 53 aa8.53□□□□□ -1.04
MKS1-202ENST00000393119 C8orf17Q9NRJ1 99 aa8.53□□□□□ -1.04
MKS1-202ENST00000393119 FAM229AH3BQW9 127 aa8.52□□□□□ -1.05
MKS1-202ENST00000393119 FLG2Q5D862 2391 aaPredicted RBP8.52□□□□□ -1.05
MKS1-202ENST00000393119 ATP11AUNQ6ZP68 121 aa8.51□□□□□ -1.05
MKS1-202ENST00000393119 CDK2AP2O75956 126 aa8.51□□□□□ -1.05
MKS1-202ENST00000393119 C4orf48Q5BLP8 95 aa8.51□□□□□ -1.05
MKS1-202ENST00000393119 COA5Q86WW8 74 aa8.51□□□□□ -1.05
MKS1-202ENST00000393119 ASB16-AS1Q495Z4 193 aa8.5□□□□□ -1.05
MKS1-202ENST00000393119 LINC00304Q8N9R0 145 aa8.5□□□□□ -1.05
MKS1-202ENST00000393119 A6NN06 94 aa8.49□□□□□ -1.05
MKS1-202ENST00000393119 SPTSSBQ8NFR3 76 aa8.49□□□□□ -1.05
MKS1-202ENST00000393119 FAT3Q8TDW7 4589 aa8.49□□□□□ -1.05
MKS1-202ENST00000393119 A6NED7 52 aa8.47□□□□□ -1.05
MKS1-202ENST00000393119 CDC42SE1Q9NRR8 79 aa8.46□□□□□ -1.06
MKS1-202ENST00000393119 SPINK1P00995 79 aa8.45□□□□□ -1.06
MKS1-202ENST00000393119 RETNLBQ9BQ08 111 aa8.45□□□□□ -1.06
MKS1-202ENST00000393119 LINC01558Q9Y6Z2 57 aa8.45□□□□□ -1.06
MKS1-202ENST00000393119 RBM12B-AS1Q9P1G2 102 aa8.44□□□□□ -1.06
MKS1-202ENST00000393119 NDUFS5O43920 106 aa8.44□□□□□ -1.06
MKS1-202ENST00000393119 Q8N1X5 172 aa8.42□□□□□ -1.06
MKS1-202ENST00000393119 KRTAP4-5Q9BYR2 181 aa8.41□□□□□ -1.06
MKS1-202ENST00000393119 MRPL34Q9BQ48 92 aaKnown RBP8.4□□□□□ -1.07
MKS1-202ENST00000393119 TP53AIP1Q9HCN2 124 aa8.39□□□□□ -1.07
MKS1-202ENST00000393119 LINC00313P59037 77 aa8.38□□□□□ -1.07
MKS1-202ENST00000393119 Q5W150 140 aa8.36□□□□□ -1.07
MKS1-202ENST00000393119 PCOTHQ58A44 107 aa8.35□□□□□ -1.07
MKS1-202ENST00000393119 DMBT1Q9UGM3 2413 aaPredicted RBP8.34□□□□□ -1.07
MKS1-202ENST00000393119 KRTAP10-8P60410 259 aa8.34□□□□□ -1.07
MKS1-202ENST00000393119 SPAG11AQ6PDA7 123 aa8.34□□□□□ -1.07
MKS1-202ENST00000393119 ABCA13Q86UQ4 5058 aa8.34□□□□□ -1.07
MKS1-202ENST00000393119 KRTAP16-1A8MUX0 517 aa8.33□□□□□ -1.08
MKS1-202ENST00000393119 HRES1P13985 223 aa8.33□□□□□ -1.08
MKS1-202ENST00000393119 C9orf92A6NGG3 77 aa8.32□□□□□ -1.08
MKS1-202ENST00000393119 C7orf65Q6ZTY9 151 aa8.32□□□□□ -1.08
MKS1-202ENST00000393119 SPINK7P58062 85 aa8.31□□□□□ -1.08
MKS1-202ENST00000393119 C8orf87E5RJ46 101 aa8.29□□□□□ -1.08
MKS1-202ENST00000393119 RPS29P62273 56 aaKnown RBP8.28□□□□□ -1.08
MKS1-202ENST00000393119 MT1HL1P0DM35 61 aa8.27□□□□□ -1.09
MKS1-202ENST00000393119 BIRC6Q9NR09 4857 aa8.24□□□□□ -1.09
MKS1-202ENST00000393119 KRTAP13-3Q3SY46 172 aa8.24□□□□□ -1.09
MKS1-202ENST00000393119 HERC2O95714 4834 aa8.21□□□□□ -1.09
MKS1-202ENST00000393119 LPAP08519 4548 aa8.14□□□□□ -1.11
MKS1-202ENST00000393119 IGKV2D-30A0A075B6S6 120 aa8.1□□□□□ -1.11
MKS1-202ENST00000393119 IGKV2-30P06310 120 aa8.1□□□□□ -1.11
MKS1-202ENST00000393119 DMAC1Q96GE9 116 aa8.09□□□□□ -1.11
MKS1-202ENST00000393119 ACYP2P14621 99 aa8.08□□□□□ -1.12
MKS1-202ENST00000393119 A8MUU9 505 aa8.05□□□□□ -1.12
MKS1-202ENST00000393119 PRAC1Q96KF2 57 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms