RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 SPACA4Q8TDM5 124 aa9.1□□□□□ -0.95
SHTN1-204ENST00000392903 HECTD4Q9Y4D8 3996 aa9.08□□□□□ -0.96
SHTN1-204ENST00000392903 RTL8CO15255 209 aa9.07□□□□□ -0.96
SHTN1-204ENST00000392903 HRES1P13985 223 aa9.06□□□□□ -0.96
SHTN1-204ENST00000392903 SPINK7P58062 85 aa9.06□□□□□ -0.96
SHTN1-204ENST00000392903 Q96NJ1 140 aa9.06□□□□□ -0.96
SHTN1-204ENST00000392903 KRTAP13-1Q8IUC0 172 aa9.05□□□□□ -0.96
SHTN1-204ENST00000392903 DNAH2Q9P225 4427 aa9.05□□□□□ -0.96
SHTN1-204ENST00000392903 C8orf17Q9NRJ1 99 aa9.04□□□□□ -0.96
SHTN1-204ENST00000392903 LY6G6CO95867 125 aa9.03□□□□□ -0.96
SHTN1-204ENST00000392903 IGLV9-49A0A0B4J1Y8 123 aa9.01□□□□□ -0.97
SHTN1-204ENST00000392903 C1orf134Q5TEV5 83 aa9□□□□□ -0.97
SHTN1-204ENST00000392903 PSORS1C2Q9UIG4 136 aa9□□□□□ -0.97
SHTN1-204ENST00000392903 IGLV5-52A0A0A0MRZ9 124 aa8.99□□□□□ -0.97
SHTN1-204ENST00000392903 FRAS1Q86XX4 4008 aa8.98□□□□□ -0.97
SHTN1-204ENST00000392903 A0A1B0GVX0 72 aa8.96□□□□□ -0.97
SHTN1-204ENST00000392903 ANAPC11Q9NYG5 84 aa8.96□□□□□ -0.97
SHTN1-204ENST00000392903 MRPL34Q9BQ48 92 aaKnown RBP8.95□□□□□ -0.98
SHTN1-204ENST00000392903 IGHV6-1A0A0B4J1U7 121 aa8.94□□□□□ -0.98
SHTN1-204ENST00000392903 ALMS1Q8TCU4 4167 aa8.92□□□□□ -0.98
SHTN1-204ENST00000392903 DNAH6Q9C0G6 4158 aa8.92□□□□□ -0.98
SHTN1-204ENST00000392903 PRR26Q8N8Z3 221 aa8.9□□□□□ -0.98
SHTN1-204ENST00000392903 LINC00313P59037 77 aa8.9□□□□□ -0.99
SHTN1-204ENST00000392903 ZNF861PO60384 105 aa8.89□□□□□ -0.99
SHTN1-204ENST00000392903 DNAH17Q9UFH2 4485 aa8.89□□□□□ -0.99
SHTN1-204ENST00000392903 CDK2AP2O75956 126 aa8.89□□□□□ -0.99
SHTN1-204ENST00000392903 LINC00483Q53H64 154 aa8.89□□□□□ -0.99
SHTN1-204ENST00000392903 DNAH8Q96JB1 4490 aa8.88□□□□□ -0.99
SHTN1-204ENST00000392903 C8orf87E5RJ46 101 aa8.88□□□□□ -0.99
SHTN1-204ENST00000392903 KRTAP10-2P60368 255 aa8.88□□□□□ -0.99
SHTN1-204ENST00000392903 WWC2-AS2Q96NR7 200 aa8.87□□□□□ -0.99
SHTN1-204ENST00000392903 ZNF706Q9Y5V0 76 aaPredicted RBP8.86□□□□□ -0.99
SHTN1-204ENST00000392903 A0A087X002 238 aa8.85□□□□□ -0.99
SHTN1-204ENST00000392903 KRTAP13-3Q3SY46 172 aa8.85□□□□□ -0.99
SHTN1-204ENST00000392903 NOTCH2NLQ7Z3S9 236 aa8.85□□□□□ -0.99
SHTN1-204ENST00000392903 ACYP2P14621 99 aa8.84□□□□□ -0.99
SHTN1-204ENST00000392903 PLA2G1BP04054 148 aaKnown RBP8.83□□□□□ -1
SHTN1-204ENST00000392903 CIRBP-AS1Q8TBR5 109 aa8.82□□□□□ -1
SHTN1-204ENST00000392903 PRAC1Q96KF2 57 aa8.82□□□□□ -1
SHTN1-204ENST00000392903 IGLV7-43P04211 117 aa8.82□□□□□ -1
SHTN1-204ENST00000392903 Q5W150 140 aa8.82□□□□□ -1
SHTN1-204ENST00000392903 HYDINQ4G0P3 5121 aa8.78□□□□□ -1
SHTN1-204ENST00000392903 DMAC1Q96GE9 116 aa8.78□□□□□ -1
SHTN1-204ENST00000392903 DNAH11Q96DT5 4516 aa8.77□□□□□ -1
SHTN1-204ENST00000392903 ADM2Q7Z4H4 148 aa8.76□□□□□ -1.01
SHTN1-204ENST00000392903 SPATA8Q6RVD6 105 aa8.76□□□□□ -1.01
SHTN1-204ENST00000392903 DNAH5Q8TE73 4624 aa8.76□□□□□ -1.01
SHTN1-204ENST00000392903 KRTAP10-1P60331 282 aa8.74□□□□□ -1.01
SHTN1-204ENST00000392903 A0A1B0GU69 56 aa8.73□□□□□ -1.01
SHTN1-204ENST00000392903 C4orf48Q5BLP8 95 aa8.73□□□□□ -1.01
SHTN1-204ENST00000392903 LINC01554Q52M75 96 aa8.72□□□□□ -1.01
SHTN1-204ENST00000392903 PKD1P98161 4303 aa8.72□□□□□ -1.01
SHTN1-204ENST00000392903 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
SHTN1-204ENST00000392903 FAT2Q9NYQ8 4349 aa8.68□□□□□ -1.02
SHTN1-204ENST00000392903 LRP1BQ9NZR2 4599 aa8.67□□□□□ -1.02
SHTN1-204ENST00000392903 Q6ZSA8 131 aa8.66□□□□□ -1.02
SHTN1-204ENST00000392903 MIR22HGQ0VDD5 57 aa8.66□□□□□ -1.02
SHTN1-204ENST00000392903 UQCR11O14957 56 aa8.65□□□□□ -1.02
SHTN1-204ENST00000392903 FAM229AH3BQW9 127 aa8.62□□□□□ -1.03
SHTN1-204ENST00000392903 SSBP3-AS1Q7Z2R9 100 aa8.62□□□□□ -1.03
SHTN1-204ENST00000392903 IGKV2-30P06310 120 aa8.6□□□□□ -1.03
SHTN1-204ENST00000392903 KRTAP13-2Q52LG2 175 aa8.6□□□□□ -1.03
SHTN1-204ENST00000392903 VPS13BQ7Z7G8 4022 aa8.6□□□□□ -1.03
SHTN1-204ENST00000392903 KRTAP21-3Q3LHN1 58 aa8.59□□□□□ -1.03
SHTN1-204ENST00000392903 PKHD1P08F94 4074 aa8.59□□□□□ -1.03
SHTN1-204ENST00000392903 H3BS24 57 aa8.53□□□□□ -1.04
SHTN1-204ENST00000392903 RETNLBQ9BQ08 111 aa8.53□□□□□ -1.04
SHTN1-204ENST00000392903 KRTAP1-4P0C5Y4 121 aa8.53□□□□□ -1.04
SHTN1-204ENST00000392903 CSAG1Q6PB30 78 aa8.52□□□□□ -1.05
SHTN1-204ENST00000392903 SMR3BP02814 79 aaPredicted RBP8.46□□□□□ -1.05
SHTN1-204ENST00000392903 KRTAP16-1A8MUX0 517 aa8.45□□□□□ -1.06
SHTN1-204ENST00000392903 SACSQ9NZJ4 4579 aa8.45□□□□□ -1.06
SHTN1-204ENST00000392903 TYMSOSQ8TAI1 123 aa8.44□□□□□ -1.06
SHTN1-204ENST00000392903 IGKV2D-30A0A075B6S6 120 aa8.43□□□□□ -1.06
SHTN1-204ENST00000392903 SPINK1P00995 79 aa8.34□□□□□ -1.07
SHTN1-204ENST00000392903 DYNC1H1Q14204 4646 aaKnown RBP8.33□□□□□ -1.08
SHTN1-204ENST00000392903 A0A1B0GVY2 172 aa8.32□□□□□ -1.08
SHTN1-204ENST00000392903 A8MUU9 505 aa8.31□□□□□ -1.08
SHTN1-204ENST00000392903 LINC00304Q8N9R0 145 aa8.3□□□□□ -1.08
SHTN1-204ENST00000392903 FAT1Q14517 4588 aa8.3□□□□□ -1.08
SHTN1-204ENST00000392903 KMT2CQ8NEZ4 4911 aaKnown RBP8.28□□□□□ -1.08
SHTN1-204ENST00000392903 H0YAA0 97 aa8.27□□□□□ -1.09
SHTN1-204ENST00000392903 KRTAP25-1Q3LHN0 102 aa8.27□□□□□ -1.09
SHTN1-204ENST00000392903 Q8N1X5 172 aa8.24□□□□□ -1.09
SHTN1-204ENST00000392903 KRTAP10-4P60372 401 aaPredicted RBP8.23□□□□□ -1.09
SHTN1-204ENST00000392903 APOBP04114 4563 aaKnown RBP8.22□□□□□ -1.09
SHTN1-204ENST00000392903 RYR2Q92736 4967 aa8.21□□□□□ -1.09
SHTN1-204ENST00000392903 ROMO1P60602 79 aa8.18□□□□□ -1.1
SHTN1-204ENST00000392903 C9orf92A6NGG3 77 aa8.17□□□□□ -1.1
SHTN1-204ENST00000392903 RPS29P62273 56 aaKnown RBP8.17□□□□□ -1.1
SHTN1-204ENST00000392903 A0A1B0GU33 70 aa8.15□□□□□ -1.1
SHTN1-204ENST00000392903 H1FX-AS1Q4G0G2 97 aa8.11□□□□□ -1.11
SHTN1-204ENST00000392903 FLG2Q5D862 2391 aaPredicted RBP8.07□□□□□ -1.12
SHTN1-204ENST00000392903 PKHD1L1Q86WI1 4243 aa8.07□□□□□ -1.12
SHTN1-204ENST00000392903 LRP1Q07954 4544 aaKnown RBP8.04□□□□□ -1.12
SHTN1-204ENST00000392903 KRTAP3-1Q9BYR8 98 aa8.03□□□□□ -1.12
SHTN1-204ENST00000392903 DMBT1Q9UGM3 2413 aaPredicted RBP8.01□□□□□ -1.13
SHTN1-204ENST00000392903 K7ERS5 55 aa8.01□□□□□ -1.13
SHTN1-204ENST00000392903 C20orf166-AS1Q96NR2 134 aa7.99□□□□□ -1.13
SHTN1-204ENST00000392903 RYR3Q15413 4870 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms