RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 IGLV7-46A0A075B6I9 117 aa9.79□□□□□ -0.84
SNX9-201ENST00000392185 KRTAP21-3Q3LHN1 58 aa9.79□□□□□ -0.84
SNX9-201ENST00000392185 C1orf195Q5TG92 126 aa9.77□□□□□ -0.85
SNX9-201ENST00000392185 LINC00483Q53H64 154 aa9.76□□□□□ -0.85
SNX9-201ENST00000392185 Q8N9P0 234 aaPredicted RBP9.74□□□□□ -0.85
SNX9-201ENST00000392185 COX6B2Q6YFQ2 88 aa9.71□□□□□ -0.85
SNX9-201ENST00000392185 SPANXA2-OT1Q8N9U9 137 aa9.67□□□□□ -0.86
SNX9-201ENST00000392185 HRES1P13985 223 aa9.67□□□□□ -0.86
SNX9-201ENST00000392185 ANK3Q12955 4377 aaKnown RBP9.65□□□□□ -0.87
SNX9-201ENST00000392185 KRTAP13-1Q8IUC0 172 aa9.64□□□□□ -0.87
SNX9-201ENST00000392185 NOTCH2NLQ7Z3S9 236 aa9.64□□□□□ -0.87
SNX9-201ENST00000392185 PRO0628Q9UI54 55 aa9.63□□□□□ -0.87
SNX9-201ENST00000392185 ZCCHC13Q8WW36 166 aaKnown RBP9.6□□□□□ -0.87
SNX9-201ENST00000392185 Q5W150 140 aa9.6□□□□□ -0.87
SNX9-201ENST00000392185 CYP4F30PQ9H0H9 118 aa9.6□□□□□ -0.87
SNX9-201ENST00000392185 Q6ZSA8 131 aa9.58□□□□□ -0.88
SNX9-201ENST00000392185 KRTAP13-2Q52LG2 175 aa9.58□□□□□ -0.88
SNX9-201ENST00000392185 VPS13CQ709C8 3753 aa9.57□□□□□ -0.88
SNX9-201ENST00000392185 KRTAP29-1A8MX34 341 aaPredicted RBP9.56□□□□□ -0.88
SNX9-201ENST00000392185 RBM12B-AS1Q9P1G2 102 aa9.55□□□□□ -0.88
SNX9-201ENST00000392185 UQCR11O14957 56 aa9.53□□□□□ -0.88
SNX9-201ENST00000392185 SPINK7P58062 85 aa9.53□□□□□ -0.88
SNX9-201ENST00000392185 FBN3Q75N90 2809 aa9.51□□□□□ -0.89
SNX9-201ENST00000392185 ZNF469Q96JG9 3925 aaPredicted RBP9.46□□□□□ -0.9
SNX9-201ENST00000392185 MIR22HGQ0VDD5 57 aa9.44□□□□□ -0.9
SNX9-201ENST00000392185 COL7A1Q02388 2944 aa9.41□□□□□ -0.9
SNX9-201ENST00000392185 LINC01554Q52M75 96 aa9.4□□□□□ -0.9
SNX9-201ENST00000392185 FP248Q71RG6 208 aaPredicted RBP9.39□□□□□ -0.91
SNX9-201ENST00000392185 A0A0D9SG42 100 aa9.39□□□□□ -0.91
SNX9-201ENST00000392185 OXTP01178 125 aa9.38□□□□□ -0.91
SNX9-201ENST00000392185 ASB16-AS1Q495Z4 193 aa9.34□□□□□ -0.91
SNX9-201ENST00000392185 Q1T7F1 81 aa9.34□□□□□ -0.91
SNX9-201ENST00000392185 MEGF8Q7Z7M0 2845 aa9.32□□□□□ -0.92
SNX9-201ENST00000392185 KRTAP1-4P0C5Y4 121 aa9.29□□□□□ -0.92
SNX9-201ENST00000392185 Q5XG85 94 aa9.29□□□□□ -0.92
SNX9-201ENST00000392185 SPINT4Q6UDR6 99 aa9.26□□□□□ -0.93
SNX9-201ENST00000392185 SEC61BP60468 96 aaKnown RBP9.24□□□□□ -0.93
SNX9-201ENST00000392185 LINC01558Q9Y6Z2 57 aa9.23□□□□□ -0.93
SNX9-201ENST00000392185 A0A1B0GU33 70 aa9.23□□□□□ -0.93
SNX9-201ENST00000392185 DMAC1Q96GE9 116 aa9.23□□□□□ -0.93
SNX9-201ENST00000392185 RPS29P62273 56 aaKnown RBP9.21□□□□□ -0.93
SNX9-201ENST00000392185 M0R2T5 61 aa9.21□□□□□ -0.94
SNX9-201ENST00000392185 CSAG1Q6PB30 78 aa9.2□□□□□ -0.94
SNX9-201ENST00000392185 CDC42SE1Q9NRR8 79 aa9.2□□□□□ -0.94
SNX9-201ENST00000392185 S4R3F8 94 aa9.2□□□□□ -0.94
SNX9-201ENST00000392185 Q5VV11 94 aa9.16□□□□□ -0.94
SNX9-201ENST00000392185 Q75L30 129 aa9.15□□□□□ -0.94
SNX9-201ENST00000392185 AKAP9Q99996 3911 aa9.01□□□□□ -0.97
SNX9-201ENST00000392185 A0A1B0GVY2 172 aa9□□□□□ -0.97
SNX9-201ENST00000392185 RPL37P61927 97 aaKnown RBP9□□□□□ -0.97
SNX9-201ENST00000392185 CRIPTQ9P021 101 aa9□□□□□ -0.97
SNX9-201ENST00000392185 R4GN34 69 aa8.98□□□□□ -0.97
SNX9-201ENST00000392185 A8MUU9 505 aa8.98□□□□□ -0.97
SNX9-201ENST00000392185 CAMK2N1Q7Z7J9 78 aa8.95□□□□□ -0.98
SNX9-201ENST00000392185 KTN1-AS1Q86SY8 53 aa8.95□□□□□ -0.98
SNX9-201ENST00000392185 C20orf166-AS1Q96NR2 134 aa8.94□□□□□ -0.98
SNX9-201ENST00000392185 SPATA8Q6RVD6 105 aa8.92□□□□□ -0.98
SNX9-201ENST00000392185 CSMD3Q7Z407 3707 aa8.9□□□□□ -0.99
SNX9-201ENST00000392185 ADM2Q7Z4H4 148 aa8.88□□□□□ -0.99
SNX9-201ENST00000392185 H1FX-AS1Q4G0G2 97 aa8.88□□□□□ -0.99
SNX9-201ENST00000392185 XP32Q5T750 250 aa8.87□□□□□ -0.99
SNX9-201ENST00000392185 M0QZ58 72 aa8.85□□□□□ -0.99
SNX9-201ENST00000392185 KRTAP16-1A8MUX0 517 aa8.83□□□□□ -1
SNX9-201ENST00000392185 PRAC1Q96KF2 57 aa8.83□□□□□ -1
SNX9-201ENST00000392185 HUWE1Q7Z6Z7 4374 aaKnown RBP8.83□□□□□ -1
SNX9-201ENST00000392185 LCA10Q71F78 164 aa8.83□□□□□ -1
SNX9-201ENST00000392185 DNHD1Q96M86 4753 aa8.78□□□□□ -1
SNX9-201ENST00000392185 A8MU10 97 aa8.77□□□□□ -1.01
SNX9-201ENST00000392185 KRTAP10-8P60410 259 aa8.77□□□□□ -1.01
SNX9-201ENST00000392185 KRTAP13-3Q3SY46 172 aa8.69□□□□□ -1.02
SNX9-201ENST00000392185 TPRXLQ17RH7 258 aa8.65□□□□□ -1.02
SNX9-201ENST00000392185 DNAH9Q9NYC9 4486 aa8.61□□□□□ -1.03
SNX9-201ENST00000392185 ROMO1P60602 79 aa8.53□□□□□ -1.04
SNX9-201ENST00000392185 PLECQ15149 4684 aaKnown RBP8.47□□□□□ -1.05
SNX9-201ENST00000392185 PLAC4Q8WY50 150 aa8.43□□□□□ -1.06
SNX9-201ENST00000392185 A6NN06 94 aa8.4□□□□□ -1.06
SNX9-201ENST00000392185 P0C880 135 aa8.36□□□□□ -1.07
SNX9-201ENST00000392185 KRTAP10-4P60372 401 aaPredicted RBP8.35□□□□□ -1.07
SNX9-201ENST00000392185 KRTAP4-5Q9BYR2 181 aa8.35□□□□□ -1.07
SNX9-201ENST00000392185 MT1HL1P0DM35 61 aa8.34□□□□□ -1.07
SNX9-201ENST00000392185 DNAH11Q96DT5 4516 aa8.34□□□□□ -1.07
SNX9-201ENST00000392185 DNAH5Q8TE73 4624 aa8.32□□□□□ -1.08
SNX9-201ENST00000392185 H0YAA0 97 aa8.31□□□□□ -1.08
SNX9-201ENST00000392185 PRKDCP78527 4128 aaKnown RBP8.3□□□□□ -1.08
SNX9-201ENST00000392185 DNAH10Q8IVF4 4471 aa8.28□□□□□ -1.08
SNX9-201ENST00000392185 DNAH1Q9P2D7 4330 aa8.27□□□□□ -1.09
SNX9-201ENST00000392185 KRTAP3-1Q9BYR8 98 aa8.26□□□□□ -1.09
SNX9-201ENST00000392185 STARD9Q9P2P6 4700 aa8.25□□□□□ -1.09
SNX9-201ENST00000392185 LUZP6Q538Z0 58 aa8.24□□□□□ -1.09
SNX9-201ENST00000392185 KRTAP10-10P60014 251 aa8.16□□□□□ -1.1
SNX9-201ENST00000392185 FAT1Q14517 4588 aa8.16□□□□□ -1.1
SNX9-201ENST00000392185 KRTAP25-1Q3LHN0 102 aa8.15□□□□□ -1.11
SNX9-201ENST00000392185 VPS13DQ5THJ4 4388 aa8.14□□□□□ -1.11
SNX9-201ENST00000392185 C10orf95Q9H7T3 257 aa8.07□□□□□ -1.12
SNX9-201ENST00000392185 DYNC1H1Q14204 4646 aaKnown RBP8.05□□□□□ -1.12
SNX9-201ENST00000392185 ANK2Q01484 3957 aa8.04□□□□□ -1.12
SNX9-201ENST00000392185 TNP1P09430 55 aa8.03□□□□□ -1.12
SNX9-201ENST00000392185 ALMS1Q8TCU4 4167 aa8.01□□□□□ -1.13
SNX9-201ENST00000392185 LRP1BQ9NZR2 4599 aa8□□□□□ -1.13
SNX9-201ENST00000392185 KMT2AQ03164 3969 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms