RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 DEFB116Q30KQ4 102 aa9.59□□□□□ -0.87
ERCC2-202ENST00000391942 Q96NJ1 140 aa9.59□□□□□ -0.87
ERCC2-202ENST00000391942 HERC1Q15751 4861 aa9.58□□□□□ -0.88
ERCC2-202ENST00000391942 NREPQ16612 68 aa9.57□□□□□ -0.88
ERCC2-202ENST00000391942 LINC00846Q9NV44 126 aa9.57□□□□□ -0.88
ERCC2-202ENST00000391942 HIST1H4AP62805 103 aaKnown RBP9.56□□□□□ -0.88
ERCC2-202ENST00000391942 LINC00472Q9H8W2 130 aa9.55□□□□□ -0.88
ERCC2-202ENST00000391942 IGLV7-46A0A075B6I9 117 aa9.53□□□□□ -0.88
ERCC2-202ENST00000391942 IGKV4-1P06312 121 aa9.53□□□□□ -0.88
ERCC2-202ENST00000391942 Q6ZVQ6 151 aa9.53□□□□□ -0.88
ERCC2-202ENST00000391942 FP248Q71RG6 208 aaPredicted RBP9.53□□□□□ -0.88
ERCC2-202ENST00000391942 SERP2Q8N6R1 65 aa9.5□□□□□ -0.89
ERCC2-202ENST00000391942 UBL5Q9BZL1 73 aa9.5□□□□□ -0.89
ERCC2-202ENST00000391942 ATP5EP2Q5VTU8 51 aa9.47□□□□□ -0.89
ERCC2-202ENST00000391942 BPY2O14599 106 aa9.44□□□□□ -0.9
ERCC2-202ENST00000391942 C9orf92A6NGG3 77 aa9.43□□□□□ -0.9
ERCC2-202ENST00000391942 IGHV6-1A0A0B4J1U7 121 aa9.4□□□□□ -0.9
ERCC2-202ENST00000391942 DSCR10P59022 87 aa9.4□□□□□ -0.9
ERCC2-202ENST00000391942 KRTAP13-3Q3SY46 172 aa9.4□□□□□ -0.9
ERCC2-202ENST00000391942 A8MWP4 228 aa9.39□□□□□ -0.91
ERCC2-202ENST00000391942 TPRXLQ17RH7 258 aa9.39□□□□□ -0.91
ERCC2-202ENST00000391942 HMCN2Q8NDA2 5059 aa9.38□□□□□ -0.91
ERCC2-202ENST00000391942 IGKV3D-7A0A0C4DH55 119 aa9.38□□□□□ -0.91
ERCC2-202ENST00000391942 A0A1B0GVX0 72 aa9.38□□□□□ -0.91
ERCC2-202ENST00000391942 NDUFB1O75438 58 aa9.38□□□□□ -0.91
ERCC2-202ENST00000391942 Q8N9L7 120 aa9.37□□□□□ -0.91
ERCC2-202ENST00000391942 K7EQZ3 153 aa9.36□□□□□ -0.91
ERCC2-202ENST00000391942 NOTCH2NLQ7Z3S9 236 aa9.35□□□□□ -0.91
ERCC2-202ENST00000391942 LPAP08519 4548 aa9.35□□□□□ -0.91
ERCC2-202ENST00000391942 PRR15Q8IV56 129 aa9.34□□□□□ -0.91
ERCC2-202ENST00000391942 LINC00313P59037 77 aa9.33□□□□□ -0.92
ERCC2-202ENST00000391942 CXCL6P80162 114 aa9.32□□□□□ -0.92
ERCC2-202ENST00000391942 SERP1Q9Y6X1 66 aa9.3□□□□□ -0.92
ERCC2-202ENST00000391942 XP32Q5T750 250 aa9.29□□□□□ -0.92
ERCC2-202ENST00000391942 C8orf17Q9NRJ1 99 aa9.29□□□□□ -0.92
ERCC2-202ENST00000391942 C8orf87E5RJ46 101 aa9.28□□□□□ -0.92
ERCC2-202ENST00000391942 ATP5EP56381 51 aaPredicted RBP9.28□□□□□ -0.92
ERCC2-202ENST00000391942 NDUFC1O43677 76 aa9.27□□□□□ -0.93
ERCC2-202ENST00000391942 PRO0628Q9UI54 55 aa9.27□□□□□ -0.93
ERCC2-202ENST00000391942 MMP24-AS1A0A0U1RRL7 71 aa9.25□□□□□ -0.93
ERCC2-202ENST00000391942 FAM236DA0A1B0GTK5 79 aa9.24□□□□□ -0.93
ERCC2-202ENST00000391942 KRTAP16-1A8MUX0 517 aa9.24□□□□□ -0.93
ERCC2-202ENST00000391942 FAM236CP0DP71 79 aa9.24□□□□□ -0.93
ERCC2-202ENST00000391942 TRAV7A0A075B6U4 112 aa9.23□□□□□ -0.93
ERCC2-202ENST00000391942 LRP2P98164 4655 aa9.23□□□□□ -0.93
ERCC2-202ENST00000391942 WFDC13Q8IUB5 93 aa9.22□□□□□ -0.93
ERCC2-202ENST00000391942 SMIM26A0A096LP01 95 aa9.21□□□□□ -0.93
ERCC2-202ENST00000391942 hDV103S1A0JD37 113 aa9.2□□□□□ -0.94
ERCC2-202ENST00000391942 HCG22E2RYF7 251 aa9.18□□□□□ -0.94
ERCC2-202ENST00000391942 KLKP1Q107X0 134 aa9.18□□□□□ -0.94
ERCC2-202ENST00000391942 CASC2Q6XLA1 102 aa9.18□□□□□ -0.94
ERCC2-202ENST00000391942 C4orf26Q17RF5 130 aa9.17□□□□□ -0.94
ERCC2-202ENST00000391942 C20orf166-AS1Q96NR2 134 aa9.17□□□□□ -0.94
ERCC2-202ENST00000391942 A0A087WVE0 104 aa9.16□□□□□ -0.94
ERCC2-202ENST00000391942 RPL37P61927 97 aaKnown RBP9.16□□□□□ -0.94
ERCC2-202ENST00000391942 TMEM254Q8TBM7 123 aa9.16□□□□□ -0.94
ERCC2-202ENST00000391942 A8MUU9 505 aa9.15□□□□□ -0.94
ERCC2-202ENST00000391942 Q75L30 129 aa9.15□□□□□ -0.94
ERCC2-202ENST00000391942 MRPL34Q9BQ48 92 aaKnown RBP9.15□□□□□ -0.94
ERCC2-202ENST00000391942 CYSTM1Q9H1C7 97 aa9.14□□□□□ -0.95
ERCC2-202ENST00000391942 NDUFS5O43920 106 aa9.12□□□□□ -0.95
ERCC2-202ENST00000391942 C20orf197Q8N268 126 aa9.12□□□□□ -0.95
ERCC2-202ENST00000391942 Q8N9P0 234 aaPredicted RBP9.11□□□□□ -0.95
ERCC2-202ENST00000391942 H7BZZ5 65 aa9.1□□□□□ -0.95
ERCC2-202ENST00000391942 PCOTHQ58A44 107 aa9.09□□□□□ -0.95
ERCC2-202ENST00000391942 SEC61BP60468 96 aaKnown RBP9.08□□□□□ -0.96
ERCC2-202ENST00000391942 ATP11AUNQ6ZP68 121 aa9.08□□□□□ -0.96
ERCC2-202ENST00000391942 UBR4Q5T4S7 5183 aa9.03□□□□□ -0.96
ERCC2-202ENST00000391942 ZCCHC13Q8WW36 166 aaKnown RBP9.01□□□□□ -0.97
ERCC2-202ENST00000391942 MUC17Q685J3 4493 aa9□□□□□ -0.97
ERCC2-202ENST00000391942 Q5W150 140 aa8.96□□□□□ -0.98
ERCC2-202ENST00000391942 KRTAP4-1Q9BYQ7 146 aa8.96□□□□□ -0.98
ERCC2-202ENST00000391942 V9GYY9 64 aa8.95□□□□□ -0.98
ERCC2-202ENST00000391942 TP53AIP1Q9HCN2 124 aa8.94□□□□□ -0.98
ERCC2-202ENST00000391942 RNF213Q63HN8 5207 aa8.9□□□□□ -0.99
ERCC2-202ENST00000391942 OCR1Q9BZK8 76 aa8.88□□□□□ -0.99
ERCC2-202ENST00000391942 BRK1Q8WUW1 75 aa8.85□□□□□ -0.99
ERCC2-202ENST00000391942 SNURFQ9Y675 71 aa8.85□□□□□ -0.99
ERCC2-202ENST00000391942 TRAV22A0A0B4J277 110 aa8.83□□□□□ -1
ERCC2-202ENST00000391942 SPINK7P58062 85 aa8.83□□□□□ -1
ERCC2-202ENST00000391942 IGKV2D-30A0A075B6S6 120 aa8.83□□□□□ -1
ERCC2-202ENST00000391942 A0A0U1RQV1 116 aa8.83□□□□□ -1
ERCC2-202ENST00000391942 IGKV2-30P06310 120 aa8.83□□□□□ -1
ERCC2-202ENST00000391942 SEC61GP60059 68 aa8.83□□□□□ -1
ERCC2-202ENST00000391942 MUC2Q02817 5179 aa8.82□□□□□ -1
ERCC2-202ENST00000391942 H0Y9P7 68 aa8.81□□□□□ -1
ERCC2-202ENST00000391942 Q1T7F1 81 aa8.78□□□□□ -1
ERCC2-202ENST00000391942 C7orf65Q6ZTY9 151 aa8.77□□□□□ -1
ERCC2-202ENST00000391942 MP68P56378 58 aa8.74□□□□□ -1.01
ERCC2-202ENST00000391942 HRES1P13985 223 aa8.73□□□□□ -1.01
ERCC2-202ENST00000391942 LINC00208Q96KT6 92 aa8.72□□□□□ -1.01
ERCC2-202ENST00000391942 PMAIP1Q13794 54 aa8.71□□□□□ -1.01
ERCC2-202ENST00000391942 C1orf64Q8NEQ6 169 aa8.71□□□□□ -1.01
ERCC2-202ENST00000391942 LOC101927531A0A1B0GV80 90 aa8.7□□□□□ -1.02
ERCC2-202ENST00000391942 CYP4F30PQ9H0H9 118 aa8.7□□□□□ -1.02
ERCC2-202ENST00000391942 MPLKIPQ8TAP9 179 aa8.68□□□□□ -1.02
ERCC2-202ENST00000391942 H3BPC8 53 aa8.64□□□□□ -1.03
ERCC2-202ENST00000391942 KRTAP19-2Q3LHN2 52 aa8.64□□□□□ -1.03
ERCC2-202ENST00000391942 RBM12B-AS1Q9P1G2 102 aa8.64□□□□□ -1.03
ERCC2-202ENST00000391942 COX6B2Q6YFQ2 88 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms