RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 LIMD2Q9BT23 127 aa12.49□□□□□ -0.41
COL23A1-201ENST00000390654 DNAH17Q9UFH2 4485 aa12.49□□□□□ -0.41
COL23A1-201ENST00000390654 IGLV5-52A0A0A0MRZ9 124 aa12.48□□□□□ -0.41
COL23A1-201ENST00000390654 CIRBP-AS1Q8TBR5 109 aa12.48□□□□□ -0.41
COL23A1-201ENST00000390654 A6NED7 52 aa12.47□□□□□ -0.41
COL23A1-201ENST00000390654 PMAIP1Q13794 54 aa12.47□□□□□ -0.41
COL23A1-201ENST00000390654 MRPL34Q9BQ48 92 aaKnown RBP12.47□□□□□ -0.41
COL23A1-201ENST00000390654 TP53AIP1Q9HCN2 124 aa12.47□□□□□ -0.41
COL23A1-201ENST00000390654 LINC00483Q53H64 154 aa12.46□□□□□ -0.41
COL23A1-201ENST00000390654 ASB16-AS1Q495Z4 193 aa12.45□□□□□ -0.42
COL23A1-201ENST00000390654 VPS13DQ5THJ4 4388 aa12.45□□□□□ -0.42
COL23A1-201ENST00000390654 LY6G6CO95867 125 aa12.45□□□□□ -0.42
COL23A1-201ENST00000390654 ZNF861PO60384 105 aa12.44□□□□□ -0.42
COL23A1-201ENST00000390654 ZNF706Q9Y5V0 76 aaPredicted RBP12.43□□□□□ -0.42
COL23A1-201ENST00000390654 RETNLBQ9BQ08 111 aa12.42□□□□□ -0.42
COL23A1-201ENST00000390654 Q5W150 140 aa12.41□□□□□ -0.42
COL23A1-201ENST00000390654 Q6ZR54 194 aa12.41□□□□□ -0.42
COL23A1-201ENST00000390654 LCA10Q71F78 164 aa12.4□□□□□ -0.42
COL23A1-201ENST00000390654 DNHD1Q96M86 4753 aa12.39□□□□□ -0.43
COL23A1-201ENST00000390654 HRES1P13985 223 aa12.39□□□□□ -0.43
COL23A1-201ENST00000390654 DNAH6Q9C0G6 4158 aa12.36□□□□□ -0.43
COL23A1-201ENST00000390654 PRR26Q8N8Z3 221 aa12.35□□□□□ -0.43
COL23A1-201ENST00000390654 C1orf134Q5TEV5 83 aa12.34□□□□□ -0.43
COL23A1-201ENST00000390654 PLAC8Q9NZF1 115 aa12.33□□□□□ -0.44
COL23A1-201ENST00000390654 Q75L30 129 aa12.31□□□□□ -0.44
COL23A1-201ENST00000390654 LOC101927531A0A1B0GV80 90 aa12.3□□□□□ -0.44
COL23A1-201ENST00000390654 IGLV7-43P04211 117 aa12.28□□□□□ -0.44
COL23A1-201ENST00000390654 SPINK7P58062 85 aa12.27□□□□□ -0.44
COL23A1-201ENST00000390654 DNAH11Q96DT5 4516 aa12.26□□□□□ -0.45
COL23A1-201ENST00000390654 KRTAP10-2P60368 255 aa12.26□□□□□ -0.45
COL23A1-201ENST00000390654 LINC01558Q9Y6Z2 57 aa12.23□□□□□ -0.45
COL23A1-201ENST00000390654 ALMS1Q8TCU4 4167 aa12.23□□□□□ -0.45
COL23A1-201ENST00000390654 CDC42SE1Q9NRR8 79 aa12.15□□□□□ -0.46
COL23A1-201ENST00000390654 KRTAP13-3Q3SY46 172 aa12.14□□□□□ -0.47
COL23A1-201ENST00000390654 ATP11AUNQ6ZP68 121 aa12.14□□□□□ -0.47
COL23A1-201ENST00000390654 LRP1BQ9NZR2 4599 aa12.13□□□□□ -0.47
COL23A1-201ENST00000390654 DNAH5Q8TE73 4624 aa12.13□□□□□ -0.47
COL23A1-201ENST00000390654 LINC00313P59037 77 aa12.13□□□□□ -0.47
COL23A1-201ENST00000390654 ACYP2P14621 99 aa12.07□□□□□ -0.48
COL23A1-201ENST00000390654 KRTAP13-2Q52LG2 175 aa12.07□□□□□ -0.48
COL23A1-201ENST00000390654 KTN1-AS1Q86SY8 53 aa12.06□□□□□ -0.48
COL23A1-201ENST00000390654 SSBP3-AS1Q7Z2R9 100 aa12.05□□□□□ -0.48
COL23A1-201ENST00000390654 A6NN06 94 aa12.05□□□□□ -0.48
COL23A1-201ENST00000390654 KRTAP10-1P60331 282 aa12.05□□□□□ -0.48
COL23A1-201ENST00000390654 HYDINQ4G0P3 5121 aa12.04□□□□□ -0.48
COL23A1-201ENST00000390654 IGKV2D-30A0A075B6S6 120 aa12.03□□□□□ -0.48
COL23A1-201ENST00000390654 IGKV2-30P06310 120 aa12.03□□□□□ -0.48
COL23A1-201ENST00000390654 C8orf87E5RJ46 101 aa12□□□□□ -0.49
COL23A1-201ENST00000390654 FAM229AH3BQW9 127 aa11.97□□□□□ -0.49
COL23A1-201ENST00000390654 DMAC1Q96GE9 116 aa11.95□□□□□ -0.5
COL23A1-201ENST00000390654 RBM12B-AS1Q9P1G2 102 aa11.95□□□□□ -0.5
COL23A1-201ENST00000390654 VPS13BQ7Z7G8 4022 aa11.93□□□□□ -0.5
COL23A1-201ENST00000390654 C4orf48Q5BLP8 95 aa11.93□□□□□ -0.5
COL23A1-201ENST00000390654 A0A1B0GU69 56 aa11.91□□□□□ -0.5
COL23A1-201ENST00000390654 FAT2Q9NYQ8 4349 aa11.87□□□□□ -0.51
COL23A1-201ENST00000390654 KRTAP16-1A8MUX0 517 aa11.86□□□□□ -0.51
COL23A1-201ENST00000390654 SPINK1P00995 79 aa11.86□□□□□ -0.51
COL23A1-201ENST00000390654 PLA2G1BP04054 148 aaKnown RBP11.85□□□□□ -0.51
COL23A1-201ENST00000390654 C7orf65Q6ZTY9 151 aa11.84□□□□□ -0.51
COL23A1-201ENST00000390654 KRTAP1-4P0C5Y4 121 aa11.83□□□□□ -0.52
COL23A1-201ENST00000390654 SMR3BP02814 79 aaPredicted RBP11.82□□□□□ -0.52
COL23A1-201ENST00000390654 PRAC1Q96KF2 57 aa11.82□□□□□ -0.52
COL23A1-201ENST00000390654 PKD1P98161 4303 aa11.82□□□□□ -0.52
COL23A1-201ENST00000390654 PKHD1P08F94 4074 aa11.8□□□□□ -0.52
COL23A1-201ENST00000390654 ADM2Q7Z4H4 148 aa11.8□□□□□ -0.52
COL23A1-201ENST00000390654 Q8N1X5 172 aa11.79□□□□□ -0.52
COL23A1-201ENST00000390654 TYMSOSQ8TAI1 123 aa11.78□□□□□ -0.52
COL23A1-201ENST00000390654 Q6ZSA8 131 aa11.74□□□□□ -0.53
COL23A1-201ENST00000390654 H3BS24 57 aa11.69□□□□□ -0.54
COL23A1-201ENST00000390654 MIR22HGQ0VDD5 57 aa11.69□□□□□ -0.54
COL23A1-201ENST00000390654 UQCR11O14957 56 aa11.65□□□□□ -0.54
COL23A1-201ENST00000390654 C9orf92A6NGG3 77 aa11.63□□□□□ -0.55
COL23A1-201ENST00000390654 FAT1Q14517 4588 aa11.63□□□□□ -0.55
COL23A1-201ENST00000390654 SPATA8Q6RVD6 105 aa11.61□□□□□ -0.55
COL23A1-201ENST00000390654 LINC00304Q8N9R0 145 aa11.55□□□□□ -0.56
COL23A1-201ENST00000390654 SACSQ9NZJ4 4579 aa11.47□□□□□ -0.57
COL23A1-201ENST00000390654 DYNC1H1Q14204 4646 aaKnown RBP11.47□□□□□ -0.57
COL23A1-201ENST00000390654 FLG2Q5D862 2391 aaPredicted RBP11.37□□□□□ -0.59
COL23A1-201ENST00000390654 DMBT1Q9UGM3 2413 aaPredicted RBP11.37□□□□□ -0.59
COL23A1-201ENST00000390654 CSAG1Q6PB30 78 aa11.35□□□□□ -0.59
COL23A1-201ENST00000390654 KRTAP3-1Q9BYR8 98 aa11.32□□□□□ -0.6
COL23A1-201ENST00000390654 H0YAA0 97 aa11.29□□□□□ -0.6
COL23A1-201ENST00000390654 LINC01554Q52M75 96 aa11.25□□□□□ -0.61
COL23A1-201ENST00000390654 A8MUU9 505 aa11.22□□□□□ -0.61
COL23A1-201ENST00000390654 KMT2CQ8NEZ4 4911 aaKnown RBP11.22□□□□□ -0.61
COL23A1-201ENST00000390654 LRP1Q07954 4544 aaKnown RBP11.21□□□□□ -0.61
COL23A1-201ENST00000390654 APOBP04114 4563 aaKnown RBP11.21□□□□□ -0.61
COL23A1-201ENST00000390654 C20orf166-AS1Q96NR2 134 aa11.21□□□□□ -0.61
COL23A1-201ENST00000390654 A0A1B0GU33 70 aa11.2□□□□□ -0.62
COL23A1-201ENST00000390654 RPS29P62273 56 aaKnown RBP11.18□□□□□ -0.62
COL23A1-201ENST00000390654 MYCBP2O75592 4640 aa11.15□□□□□ -0.63
COL23A1-201ENST00000390654 A0A1B0GVY2 172 aa11.12□□□□□ -0.63
COL23A1-201ENST00000390654 KRTAP10-4P60372 401 aaPredicted RBP11.12□□□□□ -0.63
COL23A1-201ENST00000390654 CRIPTQ9P021 101 aa11.12□□□□□ -0.63
COL23A1-201ENST00000390654 PKHD1L1Q86WI1 4243 aa11.11□□□□□ -0.63
COL23A1-201ENST00000390654 H1FX-AS1Q4G0G2 97 aa11.1□□□□□ -0.63
COL23A1-201ENST00000390654 RYR2Q92736 4967 aa11.02□□□□□ -0.65
COL23A1-201ENST00000390654 HSPG2P98160 4391 aa11.01□□□□□ -0.65
COL23A1-201ENST00000390654 COX6B2Q6YFQ2 88 aa11□□□□□ -0.65
COL23A1-201ENST00000390654 FAT3Q8TDW7 4589 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms