RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 DEFB133Q30KQ1 61 aa-1.33□□□□□ -2.62
TRAJ28-201ENST00000390509 MEIG1Q5JSS6 88 aa-1.33□□□□□ -2.62
TRAJ28-201ENST00000390509 LZICQ8WZA0 190 aa-1.33□□□□□ -2.62
TRAJ28-201ENST00000390509 PFDN5Q99471 154 aa-1.33□□□□□ -2.62
TRAJ28-201ENST00000390509 HOPXQ9BPY8 73 aaPredicted RBP-1.33□□□□□ -2.62
TRAJ28-201ENST00000390509 PCBD2Q9H0N5 130 aa-1.33□□□□□ -2.62
TRAJ28-201ENST00000390509 KCNQ1DNQ9H478 68 aa-1.33□□□□□ -2.62
TRAJ28-201ENST00000390509 SPANXA1Q9NS26 97 aa-1.33□□□□□ -2.62
TRAJ28-201ENST00000390509 MON2Q7Z3U7 1717 aa-1.33□□□□□ -2.62
TRAJ28-201ENST00000390509 C5P01031 1676 aa-1.33□□□□□ -2.62
TRAJ28-201ENST00000390509 ROBO1Q9Y6N7 1651 aa-1.33□□□□□ -2.62
TRAJ28-201ENST00000390509 SYNMO15061 1565 aa-1.34□□□□□ -2.62
TRAJ28-201ENST00000390509 VPS13AQ96RL7 3174 aa-1.34□□□□□ -2.62
TRAJ28-201ENST00000390509 LRRIQ1Q96JM4 1722 aa-1.34□□□□□ -2.62
TRAJ28-201ENST00000390509 MYOM2P54296 1465 aa-1.34□□□□□ -2.62
TRAJ28-201ENST00000390509 SMIM27A0A1W2PRY6 76 aa-1.34□□□□□ -2.62
TRAJ28-201ENST00000390509 hADV29S1A0JD25 119 aa-1.34□□□□□ -2.62
TRAJ28-201ENST00000390509 RBP2P50120 134 aa-1.34□□□□□ -2.62
TRAJ28-201ENST00000390509 RPS25P62851 125 aaKnown RBP-1.34□□□□□ -2.62
TRAJ28-201ENST00000390509 DR1Q01658 176 aa-1.34□□□□□ -2.62
TRAJ28-201ENST00000390509 UBL5Q9BZL1 73 aa-1.34□□□□□ -2.62
TRAJ28-201ENST00000390509 GID8Q9NWU2 228 aa-1.34□□□□□ -2.62
TRAJ28-201ENST00000390509 TOP2BQ02880 1626 aa-1.34□□□□□ -2.62
TRAJ28-201ENST00000390509 NAIPQ13075 1403 aa-1.34□□□□□ -2.62
TRAJ28-201ENST00000390509 DIP2BQ9P265 1576 aa-1.34□□□□□ -2.62
TRAJ28-201ENST00000390509 KTN1Q86UP2 1357 aaKnown RBP-1.34□□□□□ -2.62
TRAJ28-201ENST00000390509 CEP152O94986 1710 aa-1.35□□□□□ -2.62
TRAJ28-201ENST00000390509 KIF20BQ96Q89 1820 aa-1.35□□□□□ -2.63
TRAJ28-201ENST00000390509 NRXN1Q9ULB1 1477 aa-1.35□□□□□ -2.63
TRAJ28-201ENST00000390509 ETDCA0A1B0GVM5 59 aa-1.35□□□□□ -2.63
TRAJ28-201ENST00000390509 SARNPP82979 210 aaKnown RBP-1.35□□□□□ -2.63
TRAJ28-201ENST00000390509 TSTD1Q8NFU3 115 aa-1.35□□□□□ -2.63
TRAJ28-201ENST00000390509 RGPD3A6NKT7 1758 aaPredicted RBP-1.35□□□□□ -2.63
TRAJ28-201ENST00000390509 RGPD4Q7Z3J3 1758 aa-1.35□□□□□ -2.63
TRAJ28-201ENST00000390509 MYH3P11055 1940 aa-1.35□□□□□ -2.63
TRAJ28-201ENST00000390509 CCDC88BA6NC98 1476 aa-1.36□□□□□ -2.63
TRAJ28-201ENST00000390509 A0A1B0GV72 72 aa-1.36□□□□□ -2.63
TRAJ28-201ENST00000390509 HFM1A2PYH4 1435 aa-1.36□□□□□ -2.63
TRAJ28-201ENST00000390509 HMGN2P05204 90 aaKnown RBP-1.36□□□□□ -2.63
TRAJ28-201ENST00000390509 G0S2P27469 103 aa-1.36□□□□□ -2.63
TRAJ28-201ENST00000390509 ARPC4P59998 168 aa-1.36□□□□□ -2.63
TRAJ28-201ENST00000390509 CKS1BP61024 79 aa-1.36□□□□□ -2.63
TRAJ28-201ENST00000390509 PYDC1Q8WXC3 89 aa-1.36□□□□□ -2.63
TRAJ28-201ENST00000390509 PMCHL2Q9BQD1 86 aa-1.36□□□□□ -2.63
TRAJ28-201ENST00000390509 DDA1Q9BW61 102 aa-1.36□□□□□ -2.63
TRAJ28-201ENST00000390509 RRBP1Q9P2E9 1410 aaKnown RBP-1.36□□□□□ -2.63
TRAJ28-201ENST00000390509 FANCAO15360 1455 aa-1.37□□□□□ -2.63
TRAJ28-201ENST00000390509 ARHGAP35Q9NRY4 1499 aa-1.37□□□□□ -2.63
TRAJ28-201ENST00000390509 CHD1O14646 1710 aa-1.37□□□□□ -2.63
TRAJ28-201ENST00000390509 UQCRHLA0A096LP55 91 aa-1.37□□□□□ -2.63
TRAJ28-201ENST00000390509 DEFB131AP59861 70 aa-1.37□□□□□ -2.63
TRAJ28-201ENST00000390509 PEA15Q15121 130 aa-1.37□□□□□ -2.63
TRAJ28-201ENST00000390509 NREPQ16612 68 aa-1.37□□□□□ -2.63
TRAJ28-201ENST00000390509 WFDC10BQ8IUB3 73 aa-1.37□□□□□ -2.63
TRAJ28-201ENST00000390509 SVBPQ8N300 66 aa-1.37□□□□□ -2.63
TRAJ28-201ENST00000390509 RABAC1Q9UI14 185 aa-1.37□□□□□ -2.63
TRAJ28-201ENST00000390509 ARHGAP5Q13017 1502 aa-1.37□□□□□ -2.63
TRAJ28-201ENST00000390509 MAP3K4Q9Y6R4 1608 aa-1.37□□□□□ -2.63
TRAJ28-201ENST00000390509 DOT1LQ8TEK3 1739 aa-1.37□□□□□ -2.63
TRAJ28-201ENST00000390509 INO80Q9ULG1 1556 aaPredicted RBP-1.38□□□□□ -2.63
TRAJ28-201ENST00000390509 MYMXA0A1B0GTQ4 84 aa-1.38□□□□□ -2.63
TRAJ28-201ENST00000390509 FAM25AB3EWG3 89 aa-1.38□□□□□ -2.63
TRAJ28-201ENST00000390509 FAM25CB3EWG5 89 aa-1.38□□□□□ -2.63
TRAJ28-201ENST00000390509 FAM25GB3EWG6 89 aa-1.38□□□□□ -2.63
TRAJ28-201ENST00000390509 GNGT2O14610 69 aa-1.38□□□□□ -2.63
TRAJ28-201ENST00000390509 S100A1P23297 94 aa-1.38□□□□□ -2.63
TRAJ28-201ENST00000390509 SMIM11AP58511 58 aa-1.38□□□□□ -2.63
TRAJ28-201ENST00000390509 CENPHQ9H3R5 247 aa-1.38□□□□□ -2.63
TRAJ28-201ENST00000390509 IER3IP1Q9Y5U9 82 aa-1.38□□□□□ -2.63
TRAJ28-201ENST00000390509 KIF14Q15058 1648 aa-1.38□□□□□ -2.63
TRAJ28-201ENST00000390509 RGPD1P0DJD0 1748 aa-1.38□□□□□ -2.63
TRAJ28-201ENST00000390509 VPS8Q8N3P4 1428 aa-1.39□□□□□ -2.63
TRAJ28-201ENST00000390509 CEBPZOSA8MTT3 80 aa-1.39□□□□□ -2.63
TRAJ28-201ENST00000390509 AKAIN1P0CW23 69 aa-1.39□□□□□ -2.63
TRAJ28-201ENST00000390509 HTN1P15515 57 aa-1.39□□□□□ -2.63
TRAJ28-201ENST00000390509 SELENOWP63302 87 aa-1.39□□□□□ -2.63
TRAJ28-201ENST00000390509 DEFB104AQ8WTQ1 72 aa-1.39□□□□□ -2.63
TRAJ28-201ENST00000390509 C2orf88Q9BSF0 95 aa-1.39□□□□□ -2.63
TRAJ28-201ENST00000390509 RHPN1-AS1Q9BWJ2 59 aa-1.39□□□□□ -2.63
TRAJ28-201ENST00000390509 RALGAPBQ86X10 1494 aa-1.39□□□□□ -2.63
TRAJ28-201ENST00000390509 URB2Q14146 1524 aaKnown RBP-1.4□□□□□ -2.63
TRAJ28-201ENST00000390509 CC2D2AQ9P2K1 1620 aa-1.4□□□□□ -2.63
TRAJ28-201ENST00000390509 ITSN1Q15811 1721 aa-1.4□□□□□ -2.63
TRAJ28-201ENST00000390509 E5RI56 91 aa-1.4□□□□□ -2.63
TRAJ28-201ENST00000390509 COL5A1-AS1Q5SY13 56 aa-1.4□□□□□ -2.63
TRAJ28-201ENST00000390509 GLI2P10070 1586 aa-1.4□□□□□ -2.63
TRAJ28-201ENST00000390509 XIRP2A4UGR9 3374 aa-1.4□□□□□ -2.63
TRAJ28-201ENST00000390509 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.4□□□□□ -2.63
TRAJ28-201ENST00000390509 PZPP20742 1482 aa-1.41□□□□□ -2.63
TRAJ28-201ENST00000390509 NBEAP1P0C6P0 100 aa-1.41□□□□□ -2.64
TRAJ28-201ENST00000390509 FAUP35544 74 aaKnown RBP-1.41□□□□□ -2.64
TRAJ28-201ENST00000390509 DEFB114Q30KQ6 69 aa-1.41□□□□□ -2.64
TRAJ28-201ENST00000390509 LINC00470Q9BZP3 86 aa-1.41□□□□□ -2.64
TRAJ28-201ENST00000390509 NMES1Q9C002 83 aa-1.41□□□□□ -2.64
TRAJ28-201ENST00000390509 DDX60LQ5H9U9 1706 aaKnown RBP-1.41□□□□□ -2.64
TRAJ28-201ENST00000390509 NRAPQ86VF7 1730 aa-1.41□□□□□ -2.64
TRAJ28-201ENST00000390509 ABCA3Q99758 1704 aa-1.41□□□□□ -2.64
TRAJ28-201ENST00000390509 ANKRD26Q9UPS8 1709 aa-1.41□□□□□ -2.64
TRAJ28-201ENST00000390509 RICTORQ6R327 1708 aa-1.42□□□□□ -2.64
TRAJ28-201ENST00000390509 PVALEFA0A1B0GWK0 134 aa-1.42□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms